Etheostoma spectabile (orangethroat darter): 116671878
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Entry
116671878 CDS
T08457
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
esp03037
]
116671878 (rttn)
Cilium and associated proteins [BR:
esp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116671878 (rttn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
116671878
NCBI-ProteinID:
XP_032359216
LinkDB
All DBs
Position
22:complement(14124901..14157789)
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AA seq
2243 aa
AA seq
DB search
MELSPLIKKIGHSLMEIRVRALKSIICKLDHSLISVSDIVQEKMLFVYLLEWFNFPEVPM
QEEVLELLSTLSKHPSAAQMLRDVGAVDFLSQLSPNVEPRLRAVIDGTLDQLFHLPELLP
SHMVYSHGQRTATPTAPTVVPPEEHFSQMGYFHKSMPSQTDVPPQKIAVHESVRCLKFSV
FPWLSLTNTDRHILSSNESSLRSSNPNLVRSTCELLCDVITQDFPAEIFLQRPSIVKNLL
SLLRLGFGKGEASFLHLQALSCLRQLCVGLRRRLRFHQDPSFYSTKQDPVSQNSSFSYSQ
EVRGTHHSQASSPGAECSPRPSVVGRTGQRARGDGQDGDAASTSGSSHRGGAAVQAPGQT
PQSPADVANLELPDLGVEDVLELQFQQLTLAQFTVAIMEHAIPLLRTEGLHVFHCVLELL
CDAVLLLGNSVCELVWDDRSLVGMELKAKLQVCMELLGHILSYHQSYSADAPHSSQVHQR
MAYTGTAIFTIKLLQTILPPEKASDNLPESTVTAIFHLCLDMSLGSSLPSIQETAVAYLE
QVNSDSHDLYRRVTRAALWMESTCNFLKETQAEGEKNWLELLELADQAIDGIPFHQHLPI
IKEYVHICSYLWTFDQPSPLLQTESQKLLLKLLSHPSSHVKTETYECTLNLVKDCLGIQN
VSRQEPATCGAVNFLIHHRVLYEISAFGLQDSAEKVNVAAKDILLFLLKGQLMMTASTWD
RFNEALYPVMPILQGYASTEESLGNCVLLISDMSDVARDSVFPSTAQLKAALRLLFTKQP
TVRIAAVQQILPHLTSKDVADTSRPDLAQPLISSIPSLFCLRNPLDITLDTRNKSVLKVE
SVEKLFCILSSDTVDISLRKSAAEQLSVVLQDTTMHPVLKVLGITDKVISFIMGSVNGNK
SLDCLLEPCVCILRKLVYADPSLRHSLANRNLLLLTLLRASLILKENKGNGNEVAVLMSL
LLFDDIANIEKWSDKSNTDATLAPFSLPLSVIRRYNIPFQAASHHAVSPYCCVLPPSSDL
LTLAPACQALQVAWNTAWYSGIDNLLDKLCGTSTHVTEFHPNLKLSEAQVLSLQAVHLPT
ALQDCIKAIVTAAGHSSVTSALSRLSLYLLIERLALPHIPAHSCRDTLRSLSWQAAVTRF
LQVRPACVEDERLLVGIVAFLNAYFKQMHNETASDPEDKDLCWILELLLNQETPSLLNLL
LGVETQTSTPSPGEPEELKNRVSRRLQKELTSFFNILLLRLAQTTDRLCLALAGPFKSQL
AVRLLQSLRVSDAPRFYGLPSLERTLQGMVSLTAQPGWSSHCSDLEPTLLCSKYLSGLLE
VISSFYVEWGGNSMSFMGKGVTKNAVICLLHLSHEMMVKNKDKDFISQWSLGNEAAAEEA
SGSQLGLAWLIPLWVDRDQEVRFASLGLGAALSSVPSGCQALCASCQNISGGLWGTLLNI
LLDQQESSMVRREAAFILQNLLVMPMPANVEEAKDSHWQQPCVHDEVSGVSLVGLPALQA
LLYHCQYFQHVSVYATKCYRGRYTFHPQPGAAATSGPRPHESNSLDSENSLWFLRCDPPA
PTMDSSRPSSSLSTSSTEIRGSGPNTPKDPSPLSITEDTPASRLMAQGQSDTDTIDSLGS
QDSRQGEPSAVEPVVMVTPDLMTAHCGLLTNLLAILPDFTLTAIRHNQLLQALASLVDIG
PIETCLIELKTPNVLPGERGDIKIQFVTLLQFLSSFSKLLLSCVTVSQELIGQMDFLKQL
LTALVAVLTLDTKGLDAGTRDTVCVCWADVFMLLATLVRRDSSAAYPSVSAALGRRWRIF
AGTLSVCLNEKLADPLLHTVALQFLRTIFTEETKSVDVTTSNPKQATALSDIVNGPSASQ
LCELLLQSFDKRSLQDPLKKQTAKALMTLLACSPTAQNYAAKAGLIDSCVEQMKQTYSQL
HLESVRPGKASHRKKGEGYLKEIKLTVEILRSALYHNDECKVVATDARLTLALYALWPWL
LLDDPIMEAVLELLCVYTANCTTACSCVCGGGPGVALGSKGTPSNSLMHSVMKLASGVAA
DNSPVQKLAFCLLANLAMSRDCRGLLQKNNFLQAFLSVPAPKAVGVKTTFIGCGGGSLLG
LWLRLLVSLSFAEDGQQSILRVTGALELLADLAPHRRNALLTLHNLCFCPANKPHVIAND
KAMKVLLSCLNSKEMETRSMGASALWALLHNNQRAKTTLKCPSVRLRIEEARTISKKDAE
NKQDPMTTYLLQCLENLSQLLNN
NT seq
6732 nt
NT seq
+upstream
nt +downstream
nt
atggagttatctccccttattaagaaaataggccactcgttgatggaaataagagttcga
gccctgaagagcatcatatgtaagctggaccattccctgatttccgtctctgacattgtc
caagaaaagatgctgtttgtgtatcttcttgaatggttcaatttccccgaggtgccaatg
caggaagaggtcctcgagttgctctcaactttatcaaagcatcctagtgcagcccagatg
ctaagagatgttggggcggtggactttctcagtcaactgtctcctaatgtggaacccaga
ctgcgagctgtcatcgatgggaccctggaccagctgttccatctacctgagctactccct
agtcatatggtctactcgcatggacagcgtacagcaactccaacagcacctacagttgtt
ccacctgaagagcatttttctcaaatgggttatttccacaagagcatgccaagccaaaca
gatgtgccacctcagaagatagcagtgcatgagtctgtgagatgtctcaagttttctgtg
tttccatggctgtctttgacaaacacagacagacacatactttcatccaatgagagttct
ctaaggagcagcaaccccaacttggtgcggagcacttgtgaacttctgtgtgatgtcatt
acgcaagactttcctgctgagatcttcctgcaaaggcccagtattgtaaagaaccttctg
tccctgttgaggctgggttttggtaaaggtgaggcaagcttcctccacttgcaggctctt
tcatgcctgcggcagctttgtgtggggctgagaaggagactgcgctttcatcaagatcca
agcttctactctacaaagcaagatccagtgtcccagaactcgtccttttcctactcacag
gaagtgcgggggacccaccattcccaggcctcatctccgggggcagagtgctctcctcgg
ccctctgtggtgggacgcacaggccagagagctaggggagatggtcaagacggagatgca
gcttccaccagtggcagctcacacagagggggagcagcagtccaggcccccgggcagacg
ccccagtctcctgcagatgtggccaacctggagcttcctgacttgggtgtagaagatgtc
ttggaactgcagtttcagcagctcactttggctcagttcactgttgccatcatggaacat
gccataccactgcttagaacagagggtttgcatgtgttccattgtgttctggagctgctg
tgcgacgctgtcctcctgctcgggaacagtgtttgtgagctggtctgggacgatcgcagc
ctggtggggatggagctgaaggcaaagctgcaagtctgcatggaactactggggcatatc
ctgagctaccatcagagctattcagcagatgctccccacagctctcaggttcatcagaga
atggcctacactggcactgctatattcaccattaaactcctgcagaccatcctccctcct
gagaaggctagtgataatctcccggagagcacagtaacagctattttccacctgtgcttg
gacatgtcattgggaagttcattacccagcattcaagagacagcggtggcctacttggag
caggtgaactcagacagccatgatctttacaggagggtgacccgcgctgccctctggatg
gaatctacttgcaacttcctcaaggaaacccaagctgagggagagaagaactggttggag
ttgctggagctggcagaccaagccatagacggcatcccgtttcatcagcacttacccatc
atcaaggaatatgttcacatctgctcttacctgtggacgtttgatcagcccagtcccctc
ctccagacagagagccagaaacttctcctcaagctgctgtctcatccttcatcgcatgtc
aaaacggaaacatacgaatgcactttaaacctggtcaaggactgtcttggcatccagaat
gtgtcacgacaggaaccagcaacatgcggtgcagtcaacttccttattcaccacagggtg
ctctatgaaataagtgcttttggacttcaggattctgctgagaaggtgaacgttgcagcc
aaagatatcctgctattcctgctcaaaggacaattgatgatgacagcatcaacctgggac
agattcaatgaggcactttaccccgtcatgcccatattacagggttacgccagcactgaa
gagtcactgggaaactgtgtcctgctgataagtgacatgtcggacgtggcaagagacagc
gtgtttccaagcacagcccagctcaaagcagcgctccgactcctttttactaaacagccc
actgtgagaatagcagcagtgcaacaaatcctgccccacttaaccagcaaggatgttgct
gacacatccagaccagacctggctcaaccactgatttcctccatccccagtctcttttgc
ctcagaaaccctttggacatcactctggacaccagaaacaagtctgtccttaaggtggag
tcggtggagaagctgttttgtatcctgtcctcagacactgttgacatctcacttagaaaa
tcggctgcagagcagctgtctgtagtgctacaagacacaacaatgcacccagtgctgaag
gttcttggaataacagacaaagtcatttctttcattatggggagtgtaaacggcaacaag
agcttagattgcctgctggagccttgtgtatgtatcctgaggaagctggtgtatgctgat
ccatctctgaggcacagtctggcaaatcgcaacctcctgctcctcacactgctcagggca
tccttgatattaaaggagaacaaaggcaatggaaatgaggttgctgtcctgatgagttta
ctgctatttgatgatattgccaatattgaaaaatggtcggacaaatccaacacagatgca
acccttgcaccgttttccctaccactgtcagtgatacgcaggtacaacattccattccag
gcagcgagtcatcacgctgtcagcccgtactgctgcgtcctacccccctcctcggacctc
ctgaccctggcacccgcctgccaagccctgcaggtagcctggaacactgcatggtattct
gggatagacaacctccttgacaagctgtgtggcacatctactcatgttactgaatttcat
cccaacctaaagctgtcagaagcacaagttctgtcgctgcaggcggtgcaccttcccacg
gcactgcaggactgcatcaaggccattgtcacggcagcaggacacagctctgtgacctct
gccctctccaggctcagcctctatttactgattgagcgactggcccttcctcacatcccg
gcccacagctgcagagacacccttcgctccctcagctggcaggcagcagtgacaaggttt
ctccaggtgcgtccagcttgtgttgaggatgagaggttgctggtgggaattgttgcattt
ttgaatgcctacttcaaacaaatgcacaatgagactgcatctgacccagaggacaaggac
ctgtgctggatactggagctacttctcaaccaggagaccccatcgcttcttaatttgctg
cttggtgtggagactcagacctcaactccgagccctggggagccggaggaattgaagaac
cgtgtcagccggagactgcagaaagaactcaccagcttctttaacatcttactcttacga
cttgcacaaaccactgacaggctatgtctggcattagcaggcccattcaaaagccagctg
gcagtccgtttgcttcagagcctgcgggtgtccgacgccccgcgtttctatggccttcct
agcctggagaggacattgcaaggcatggtcagcctgactgcccagcctggctggagctcc
cactgctctgacctggaacccaccttgctctgctccaagtatctcagtggcctattagag
gtgatctcctcattttatgtcgagtggggaggcaattccatgtctttcatgggaaaaggt
gtgaccaagaatgctgtcatctgcttgcttcacctgtcccatgagatgatggtcaagaac
aaggacaaggactttatatcccaatggtctttgggaaatgaggcagctgctgaggaggct
agtggctctcagcttggtttggcctggctcatcccactatgggtcgaccgcgaccaagag
gtgagatttgccagtttgggtttaggtgcagctctgtcctcggtgcccagcgggtgccag
gctctgtgtgccagctgtcagaacatcagcggaggtctgtggggcacgttgctcaacatt
ctcctggatcagcaggagagcagcatggtccgcagagaggctgcattcatcctgcaaaac
ctgctggtgatgcccatgcctgccaacgtagaggaggccaaggactcccactggcagcaa
ccatgtgtccatgatgaggtgtctggtgtgtctctggtgggtcttccagcgctccaggct
ctgctctaccactgtcagtacttccaacatgtgtctgtctatgccaccaaatgttaccga
ggcaggtacactttccacccgcaacctggtgctgccgcgaccagtggacctcgtccccat
gagagcaattctctcgattctgagaattccctgtggtttttgagatgcgacccaccagcg
cctactatggactctagcagaccttccagctccctctccacatccagcactgagataaga
ggctcagggcctaacacccccaaggatccctccccgttgagcatcacagaagataccccc
gccagcagactgatggctcaaggccagagtgacacagacaccatcgactcgctgggctcc
caagactcccgccagggcgagccctcggccgtggaacccgttgtcatggtaactcccgac
ctcatgacggcccactgtggcctgctgactaacctgctggccatcctgccagacttcacc
ctcactgccatccgacacaaccagctcctccaagcactggccagtctggtggatattggg
cccatcgagacatgtctgattgagttgaagacacccaatgtcctaccaggagagagagga
gacatcaagatccagtttgtcaccctacttcagttcctgtccagcttctccaaactgctg
ctgtcatgtgtcacggtgagccaagagcttattggccagatggacttcctgaaacagctg
ttgactgctctggtggcagtgctcacactggataccaaaggattagatgcaggtacccga
gatacggtttgtgtgtgctgggcagacgtgtttatgctcctggctactctggtgagaagg
gacagctcggcagcgtacccatctgtttctgctgcgctggggagacgctggcggatattt
gcaggaacattatccgtgtgtttgaatgagaagcttgcggaccctcttctccacacagtg
gctctgcagtttctccgtacaattttcacagaggagacaaagagtgtagatgtcacaacc
tcaaaccctaaacaggctactgctttgtctgacattgtgaatggtccctcagccagccag
ctgtgtgaactgttactgcagagttttgataagaggtcccttcaggacccattgaagaag
cagacagccaaagctctgatgacactactggcctgcagtcccacagctcaaaactacgca
gccaaagctggtctaattgacagctgtgtggagcaaatgaagcaaacttactcccagctc
cacctggagtccgtccgacccggcaaggcttcccaccgcaaaaagggagaagggtattta
aaggaaataaagctgactgtggagatcctgcggagtgctctttaccacaacgatgaatgc
aaagttgttgccacagatgctcgcctaacactggcactctatgctctttggccttggctc
ctattggatgaccccatcatggaggcggtgctggagcttctgtgtgtctatacggccaac
tgcaccacagcatgcagttgtgtttgtggcggcggccccggtgttgcactaggatccaaa
ggcacccctagtaactctctgatgcactctgtgatgaagctggcctcaggggtcgcagca
gataacagccctgtccagaagctagccttctgtctcttggctaacctcgccatgtcccgc
gactgcagaggcctcctgcaaaagaataatttcctgcaagccttcctgtcagtgccagcg
cccaaggcggttggtgttaagaccacattcataggttgtggtggtggaagcctactgggc
ctgtggctgaggctgctggttagtctctcgtttgcggaggacggccaacagagtatcctt
agggtgactggagccctggaactgctggcggacttggcaccacaccgccgcaacgcactg
ctcacccttcacaacctctgcttctgccctgccaacaagccacacgtcattgccaatgac
aaagccatgaaggtgttactaagttgtctgaacagtaaagagatggaaacccgctctatg
ggagcatctgcattatgggcattgctccataacaatcagagggctaagactactttgaag
tgtccctctgttcgattgagaattgaggaggcacgtaccatctctaagaaggatgcagag
aacaagcaggatcctatgactacctacctgttgcagtgccttgaaaacctttcccagctg
ctaaataactga
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