Etheostoma spectabile (orangethroat darter): 116671896
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Entry
116671896 CDS
T08457
Symbol
zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116671896 (zeb1)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
116671896 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
Homeodomain
zf-met
zf-H2C2_5
zf-C2H2_6
Zn_SUZ12
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
116671896
NCBI-ProteinID:
XP_032359260
LinkDB
All DBs
Position
22:complement(2609270..2665256)
Genome browser
AA seq
1092 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNKVVEAGSDSDDEDKLHIVEEEGSLADCDSTLPDDEH
PRERCWDGVKEDCVSDAEDDVSTDALVEEMLQQGDTAVIYPEAPEDEPRQGTPDASVHDE
NGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFNCPECSYSFAYRAQLERHM
TVHKSGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKKRFSH
SGSYSSHISSKKCIGIISFNGRPRQGNAKTQAQGQSPVSPTPPSVLRTQIREKLEHSKPL
QEQLPLNQIKTEPVDYEYKPTVMTSPSMAAMNGGVFSGGAAAPLQGTVQAMVLPTVGLVS
PISINLADLQNALKVAVDGNIIRQVLENNAKGQGQVNSGLTTGMLHPGQQQLISAISLPI
VGQDGNAKIIINYSLDPNQGQLTAHNLKKEPEPTSPGQTTIDNFKSQKLPEDLTTRGARP
NETKDKEEKTTKTCLLCDNCPGGLEALHALKHCKKDGLRLNGAGLESESAVAALLSEGGL
CNQPKNLLSLLKAYFALNAEPTKDELAKISDSVSLPTHVVKKWFDKMQEGQISLGAPTPP
SEEEDTCEANSVVSLVPGKNMVNMSPSMTQDSPTEATPAEVNGTHSSPDPPSPLNLRSGS
PVPGQSPLSTEGPLDLSLPKPAREEAERGVAKACAHPFSSSGSTNADEPLNLTCTKKEAS
ALSAMGPSPIALYASQPSAKPLDIVTTMQCLRALATNNKQTILIPQLAYTYTTTANSPAG
TETQETIHLNGVKEEKHDTGSEGVSTVEEQNDSDSGPPRKKMKKTDSGMYACDLCDKIFQ
KSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGS
YSQHMNHRYSYCKKETQGQGEGRDSPEAYAEAPAEMEALGRAPRHLAAAQLDLDERGSST
REDEESEEEEEEDGVVDMDDIQVVQIGDEGGDEEEEEEEEEEERNGKEIERVLVELGEEE
KTEVDVEEKEEEADTRQEELLGSIREEEEVQMDTEEGRMEEGEVTEESGGETHENTVSEE
QNLTPQEKGDTD
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaacaacgtg
actaactacaataaggtggtggaggccggctcagactcggatgatgaagacaagctgcac
atcgtggaggaggaaggcagcctggccgactgcgacagcaccttgccagacgacgagcac
cccagggagcgctgctgggatggagtcaaggaggattgtgtgtcagacgctgaggatgat
gtgagcacagacgccctagtggaggagatgctccagcaaggagacacggccgtcatttac
ccagaagccccagaggatgagccacgtcagggtacccctgacgccagtgtccatgacgag
aatggaactcctgattccttctctcagctactcacctgcccgtactgcgcacgtggctac
aagcgttacagctccctgaaagagcacatcaagtaccggcacgagaagaccgaggagagc
ttcaactgccccgagtgcagctacagctttgcataccgagctcaactggagaggcatatg
acagtccacaagagcggaagggatcagagacacatcacacagtcgggaggcaatcgtaaa
ttcaagtgcactgaatgtggcaaagcatttaaatacaagcaccatctgaaggagcaccta
cgcatccacagcggagagaaaccctacgagtgctccaactgcaagaagcgcttctcccac
tcaggctcctacagctcccacatcagcagtaagaagtgcatcggcatcatctcatttaac
ggcagaccgcgccaggggaacgccaaaacccaggcccagggtcaatcgccagtgtccccc
acgcccccctcagtcctccgcacccagattagggagaagctggagcacagcaagcccctg
caggagcagctgccactcaatcagatcaagaccgagcctgtggactacgagtacaagcca
acggtgatgacatccccgtctatggcagccatgaacgggggggttttcagtggaggtgct
gcagctcctctacagggcacagtgcaggccatggtcttgcccactgtggggttggtgtca
cccatcagcatcaatctggcagacctgcagaatgctctgaaagtggcggtggacggtaac
ataattcgccaggtgctggaaaacaatgccaaaggtcaggggcaggtgaactcggggtta
accactggaatgctccatcctggacagcagcagctcatctcagccatcagtctgcctatt
gtgggtcaggatggaaatgcaaaaattattataaactacagtttggaccccaaccagggc
cagctcactgcccataacctaaagaaagagcctgagcccacatcaccaggtcagaccacc
attgacaacttcaagtcccagaaactcccagaggatctaaccaccagaggcgccaggccc
aatgagactaaagataaagaggaaaagaccactaaaacgtgtctcctgtgtgataactgt
cccggcgggctggaagcactccatgcccttaagcactgcaagaaggatggtctccggctg
aacggagcaggcctggagtctgagtctgctgtcgctgccttactgtcagaaggaggactt
tgtaaccagcccaagaacctgttgtccctcctcaaggcctactttgccctaaatgcagag
cccaccaaggacgagctggctaagatctctgactcagtcagcctgccaacccatgtggta
aagaagtggttcgacaaaatgcaagagggtcagatatcactgggtgccccaacacctccc
tctgaggaagaggacacctgtgaagctaacagtgtggtgtctctggtcccagggaagaac
atggtcaatatgagcccttccatgacccaggacagccctacagaagccactccagcagag
gtcaacggcactcacagctcgccggaccctccatcgccactaaacctgagatctggcagt
cccgtcccaggccagtctcccttgagcactgagggacccctagacctgtcgctgccaaag
cctgccagagaggaagcggagagaggggtggctaaagcctgcgctcaccccttctcttcc
tctggctccaccaatgcggatgaacctctaaacttaacttgcacaaagaaagaggcatcg
gccctctcagccatgggccccagccccatcgcactgtacgccagccagccaagtgccaaa
cccctcgacattgtgaccacaatgcaatgcctaagggcactagccactaacaacaaacag
actatcctgatcccccagctggcttacacctataccactacagccaacagcccggcgggg
acggagacgcaggaaaccatccacctcaacggagtaaaggaggagaaacacgacacagga
tcagagggcgtgtccaccgtagaggagcagaacgactccgactcgggccctccgaggaag
aagatgaagaagacggacagcggcatgtacgcctgcgacctgtgcgacaagatcttccag
aagagcagctcgctgctgagacacaaatacgaacacacagggaaacggcctcacgagtgt
ggcatctgcagcaaggccttcaaacacaaacaccacttgatcgaacacatgcggctccac
tcgggggagaagccttaccagtgtgacaagtgcggcaagcgcttctcccactcgggctcc
tactcccaacacatgaaccaccgctactcctactgcaagaaggagacgcagggccaaggc
gagggccgcgacagccccgaggcgtacgccgaggccccggccgagatggaggccctgggc
cgggcgccgcggcacctggccgccgcccagctggacctggacgagcgagggagcagcacc
agggaggatgaggagagcgaggaagaggaggaggaggacggtgtggtggacatggacgac
attcaggtggtgcagataggggacgaaggaggggatgaggaggaggaggaggaggaagaa
gaagaagagaggaatgggaaggagatagagagagtgttggtggagttaggagaggaggag
aagacagaagtcgatgtggaggagaaagaagaggaggctgacacaaggcaggaagagttg
ctcgggagcattcgggaagaggaggaagtccagatggatacagaagaggggcggatggaa
gagggggaggtgacggaggagagcggaggcgagacacacgagaacacagtttctgaagag
cagaacctgacgccgcaggagaaaggagatactgactga
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integrated database retrieval system
