Etheostoma spectabile (orangethroat darter): 116671945
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Entry
116671945 CDS
T08457
Name
(RefSeq) cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116671945
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Major cadherins
116671945
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
Stevor
RET_CLD1
Fibulin_C
DUF443
ASFV_J13L
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
116671945
NCBI-ProteinID:
XP_032359327
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Position
22:5649675..5748895
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AA seq
803 aa
AA seq
DB search
MLTRNCLLLFLWILVNEGSVSCLRPPTPPLGRSRTGREHARSLVGPMRNGAAGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDRGDNAVKYTLSGDGAGSIFTIDQTTGDIHALR
SLDREEKPYYTLRAQAVDMDTNRPLEPESEFVIKVQDINDNEPKFLEGPYTASVPEMSPV
GTYVTQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIKTALPNMDREVKEQYQV
LIQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSFFHLRVPESSAVGSAVGRIKAHD
LDIGRNAEVEYTIVPGDGGAMFDITTNEHNQEGMIILKRPLDYESKKTYTFKVDASNAHL
DPRFQSFGAFKDTATVKINVLDVDEPPVFNKPSYVMDVYEDTPAGTIIGAVTAQDLDASS
SPVRYSIDWKSDLDSYFDIDPVEGTISTNELLDRENIAQHNISIVATKLNSPVLSSRVAV
TVHVLDINEFPPELSSPYETFVCENAKVGQVIQTFSAKDQDLPTAGQQFSFKSPKEDIKN
KNFTIRDFGNNTAGIVTKRSGFRRRLQEIYFLPVVIDDNGYPPKSSTGTLTIRVCGCEAD
GSLLTCSAEAIFLPVGLSTGALIAILLCIIILLVIVVLYVGLRRQKKKETLMSSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLRNPKVVKENLFRRDVKPEMKRGPRPPVSQDSADIRDF
INQRLKEHDLDNSAPPYDSLATYAYEGDGSVAESLSSIESLARDLEEDYDYLNDWGPRFK
TLAGIFGEQSETHSDSTTTENTH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaaggaactgcctgctgctgttcctctggattcttgtcaacgaaggctcagtc
tcttgtttacgtccacctacaccaccactgggacggagcaggacggggagggagcacgcc
aggagcttggtgggcccgatgaggaatggggcagctggatttcaacgggtcaaaaggggc
tgggtgtggaaccagttctttgtactggaggagtacatggggtcagacccgcagtacgtg
ggcaagctgcacactgacctcgataggggcgacaatgcggtgaagtacactctctcggga
gacggggctggctccattttcacaattgaccaaacaacgggggacatccatgccttacgg
agtcttgacagggaggagaagccttactacaccctacgcgcccaagcggttgacatggac
accaataggcccctggagcctgaatcagaatttgtaatcaaggttcaagacatcaacgac
aatgagccaaaattcctggagggaccatatacggccagtgttcctgagatgtcaccagta
gggacatatgtgacgcaagtgactgccacagacgcagatgaccctacctatggaaacagt
gctagagtggtatacagcatcctacatggccagccatacttctctgttgaccccaaaaca
ggtgttataaagacagccttgcccaatatggaccgagaggtgaaggaacagtaccaggta
ctaatccaggccaaggacatggggggccagctgggggggctggctgggaccaccaccatc
aacatcactctcagcgatgtcaacgataatccacccaggttctctaaaagtttctttcat
ctacgagttcctgagtcctctgcagtggggtctgctgttggaagaatcaaagcccatgac
ttggacatcgggagaaatgccgaagtagagtacaccatcgtgccaggtgatggaggcgcc
atgtttgacatcaccaccaatgaacacaaccaagaggggatgatcattctcaaaaggccc
ttggactacgaaagcaagaagacatacacctttaaggtagatgcctccaatgctcatctg
gatccacgatttcaaagctttggggccttcaaagacacagcaacagtgaagattaacgtt
ttggatgtggatgagcccccggtgttcaataagccctcctatgtgatggatgtgtatgag
gacacccccgcgggcaccatcattggagcggtgacggcacaggatttagatgccagcagc
agtccagtcaggtattccattgactggaagagtgacttggacagctactttgacattgat
ccagtggagggaaccatttccacaaacgaactccttgacagagagaacatcgcccagcac
aatatctccatcgtggcgaccaaacttaatagtccagttctgagcagtcgggtggccgtc
accgtccatgtgttggacatcaacgagttcccaccggaactctccagtccatatgagacc
tttgtgtgcgaaaatgccaaagtgggacaggtgattcagactttcagtgcaaaagaccag
gatctaccgacagctggacaacagttctccttcaaatcaccaaaagaagacataaaaaac
aagaatttcaccatccgggactttggaaacaacactgctggaattgtgacaaagcgaagt
ggctttagacggcgtttgcaggagatctatttccttcccgtggtgatcgacgataatggc
taccctcctaagagcagcaccggcaccctgaccatccgcgtatgtggctgcgaagcagac
ggttctctgctaacttgcagcgctgaggccatctttctccccgtgggtctcagcactgga
gctctgatcgccatccttctgtgtatcatcatcctgttagtaatcgtggtcctctatgtg
ggcttgagacggcaaaagaaaaaggaaacactcatgtcatccaaagaggacatccgggat
aatgtgatccactatgacgacgaaggagggggagaggaggacacgcacgcatttgacatg
gggacacttcgcaatcctaaggttgtcaaagagaacctgttccgcagggacgtcaaacct
gagatgaagagaggtcccaggccgcctgtctctcaggacagcgccgacatccgagatttc
atcaaccagcgtctgaaagagcacgacttggacaactcggcaccgccctatgactccctg
gccacgtacgcttacgagggcgacggctctgtggccgagtcgctaagctccatcgagtcc
ctcgccagagacctcgaggaggactatgattacctcaatgactggggcccccgctttaag
acactagcagggatatttggggaacagtcagaaactcattcggactcaaccaccacggag
aacacacattga
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