Etheostoma spectabile (orangethroat darter): 116671981
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Entry
116671981 CDS
T08457
Symbol
drosha
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116671981 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116671981 (drosha)
03009 Ribosome biogenesis [BR:
esp03009
]
116671981 (drosha)
03036 Chromosome and associated proteins [BR:
esp03036
]
116671981 (drosha)
Enzymes [BR:
esp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
116671981 (drosha)
Messenger RNA biogenesis [BR:
esp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
116671981 (drosha)
Ribosome biogenesis [BR:
esp03009
]
Eukaryotic type
90S particles
RNase
116671981 (drosha)
Prokaryotic type
rRNA processing factors
116671981 (drosha)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
116671981 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
116671981
NCBI-ProteinID:
XP_032359353
LinkDB
All DBs
Position
22:4901995..5004637
Genome browser
AA seq
1359 aa
AA seq
DB search
MSFHQDRESSKGGIPPGQHGSPQNYRPTNLRPPPPHPPVPPYHFDPQTPPISSYHGNSGY
MPPHPDFMQYPPPAPSQTPSSLNQCPMRPPFPKPPVRHGYPEPPPNFPPPPLPSSTAGPT
SGSQVAAQNAYHPYMMPPVPPPPLTHPSMPPPIASHSMGYHSPYSMNYPHPPHPPFPPPT
FNPGYNQNPSSFKPDHSFRHGGQYKYEKPLDNRRSPERGYRHDDHRQKGFGYGSHSDRHK
MESPGERKDRGRSPDKRGRPEGGRYRSEYDRGRASPRHRSRERSRERYRHRESRRSQSPD
RPRKRPRSRSTSRDRKRGRWEEERDRRTESSSGLSRERSYSSARSRDSEESFADREREKE
RERDRDRETEKEKEKGDFEKEEEELLKPAWIRCTHAENYYSNDPMDQVGDSTVVGTSKLR
DLYERFEEELGRRQERAKAARPVWDPPKTKLDEDPGGPSCKTNDSSSESDCESDGEGSTC
SSSSDSDVFDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYP
GEEPVKHCRPMNNNSGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHAPLT
NIPLCRVIRFNIDYTIHFIEEMAPENYCVQGLELFASYLFKDILELYDWNLTGPEFEASG
CQRFHFMPRFVRFLPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEELEWQKYAE
ECKGMIVNHPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWK
SYVKLRHLLANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSD
VCQHAMMLPVLTHHIRYHQCLMHLDALIGYVFKERCLLQLAMTHPSHHLNFGMNPDHARN
SLSNCGIRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAV
VEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESD
LRHAMANCFEALIGAVYLEGGLDESRQLFGRLLFNTKGLQEVWLNYPQHPLQVQEPQTDR
QLIETSPVLQKLTSFEDSIGVLFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQ
LVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQDFAITNDKTKRPVALRTK
TLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTE
GKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFP
QMAHQKRFIERKYRQELKEMRRERERQEKETDEPEECRK
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccatcaggatcgggagagctccaagggaggaatccccccaggccagcacggc
tcccctcagaactaccgacccaccaacctgaggccgccacctccccatcctcctgttccc
ccgtaccacttcgatccacagacccctcccatttcaagctaccatggaaacagtggatac
atgcctccacaccctgacttcatgcagtaccctccaccagcaccttcccagactcccagt
tctcttaaccagtgccctatgcgcccacctttccccaagccccctgttcgccacggctac
ccggaacccccgcctaactttccacctcctccccttcccagctccacagctggtcccaca
tcagggtcccaggtggctgctcaaaatgcctaccacccttacatgatgcctcccgtgccc
ccaccaccattaacacacccatccatgcccccacccatagcttctcactctatgggctac
cactctccatactccatgaactacccacatcctccccaccctcctttccctcctcctacc
ttcaaccctggctacaatcagaaccccagctcattcaaaccagaccacagcttccggcac
ggggggcaatacaagtatgagaagcccctggacaacaggaggtctccagaaagagggtat
cgccacgatgatcacagacagaagggctttggctacggtagccatagtgacaggcataaa
atggagtctcccggagagaggaaggaccgcggtaggagtccagacaaacgcggcagaccg
gagggcgggcggtacaggtctgagtacgacagaggccgggcttcccccagacacaggagc
agggaacgtagcagggagaggtatcgtcacagagaaagtcggagatcccagtcgcctgac
aggccaagaaagaggcctcgaagtcgttccacaagcagagacaggaaacgtggtcgctgg
gaagaggagagggaccggagaacggagagctcttccggcctgagcagagagcgtagctac
tcctccgccaggagccgagactccgaagagtccttcgctgacagagagcgagagaaggaa
cgagaacgggaccgagacagagagactgagaaagagaaggaaaagggggattttgagaaa
gaagaagaagagctgctgaaacctgcctggatccgctgcacacacgctgagaactactac
tccaatgaccccatggaccaagtgggagactctactgtggtggggaccagtaaactgcgg
gacctgtatgagcgctttgaggaagagctggggcggagacaggagagagccaaggccgct
cggccagtgtgggacccgcccaagaccaaactagatgaggatccaggtgggccttcctgc
aaaactaacgacagcagtagtgagtcagactgtgagtcagacggtgaaggaagcacctgc
tccagcagctctgactccgacgtgtttgatgtcattgctgagatcaagagaaagaaagct
caccctgaccgcctgcatgaggagctgtggtacaacgatcccgggcagatgaatgatggc
cccttgtgtaagtgcagtgccaaggccagacgtacagggatccgccacagcatctacccg
ggggaagagcccgtgaaacattgtcgcccaatgaacaacaattcgggaaaactgttccac
tacaggatcactgtgtctcctccaaccaacttcctgaccgacaggccgacggtgatcgag
tacgatgaccacgagtacctgtttgaaggattctctcttttctcccacgcccctctcact
aacattccattgtgccgtgtgatccgcttcaacatagattacaccattcacttcatagag
gagatggcaccggagaactactgtgtccaaggcctggagctgttcgcctcctacttgttc
aaagatattcttgagctgtatgactggaacctgacaggtcctgagtttgaggcctctgga
tgccagcggttccatttcatgccccgctttgtccgattcttacctgatggcggaaaggaa
gtgctgtccatgcatcaggtgctgctctacctgctgcgcagcagcaagcccctggtcccc
gaggaggagattgcagacatgctgcagtgggaggagctggagtggcagaaatacgcggag
gagtgcaagggcatgatcgtcaaccacccgggcatgaaaccaagctcagtgcgtatcgac
caactggacagggagcagttcaacccagatgtcatcaccttccccatcatcgttcatttt
gggatcaggccggctcagctcagctatgccggagaccctcagtaccagaagctgtggaag
agctatgtgaaactacgccaccttctggccaacagccctaaggtcaagcagattgacaag
cagaagctgacacagagagaggaagctcttcagaagatccgtcagaagaacactatgcgc
cgtgaggtgacagtggagctcagcagtcagggcttttggaagaccggcatccgctccgac
gtctgtcagcacgccatgatgctgcctgtcctcacccatcacatccggtaccaccagtgt
ctgatgcacctggatgcgctcattggctacgtcttcaaggagcgctgcctccttcagctg
gccatgactcaccccagtcaccacctcaactttggtatgaatcctgatcatgcccgcaac
tcgctgtctaactgtggcatccgccagcccaagtacggagacaggaaggtccaccacatg
tacatgaggaagaagggaatcaacactttgattaacatcatgtctcgtctggggcaggat
gacccctccccttccaggatcaatcacaacgagagactggagttcctgggcgatgctgtt
gtcgagttcctcaccagtgtccacttgtactacctttttcccagtttagaggagggcggc
ctggctacctacagaacagccatcgtacagaaccagcacttagccatgctagccaagaaa
ctggagttggatcgcttcatgctctacgcccacggaccagatctgtgccgggagtcggac
ctgcgacacgccatggccaactgctttgaggctcttattggtgctgtgtatttggaagga
ggcttggacgagtcccggcagctctttggtagactccttttcaacaccaagggcctacag
gaggtctggctcaactaccctcaacatcccctgcaggttcaggaacctcagacggacagg
cagctgattgagacatctcccgtcctccagaaactgaccagcttcgaggactctattgga
gttttgttcacacatgtgcgtcttctggccagagccttcaccctgaggactgtgggcttc
aaccacctcaccctaggccacaaccagaggatggagttcttgggagattctatcatgcag
ctggtggccacagagtacctcttcatccacttccctgatcaccatgaaggacatttaaca
ctgctccgcagttcgctggtaaacaaccgcacacaggccaaagtggcggaggagttgggc
atgcaagactttgccattactaatgacaaaaccaaacggccagtcgcactacggaccaag
actctggctgacttgttggagtctttcatcgcagctctgtacattgataaagatctggag
tatgtgcacaccttcatgaacgtctgctttttcccccggctgaaggagtttattctgaac
caggactggaatgacccaaagtctcagctgcagcagtgctgtttgaccctgagaacagag
ggcaaggagcctgacatcccgctgtacaagaccctgcagacagtggggccctcacacgca
cgcacctacaccgtcgctgtgtatttcaaaggggagcgaatcggctgtggcaaaggccca
agcatccaacaggcggaaatgggagctgcgatggatgcgctcgaaaaatataacttccca
cagatggctcatcagaagcgcttcatcgagcggaaatacagacaggagctgaaggagatg
agacgagagcgggaacgtcaggagaaggagaccgacgagccggaggaatgcaggaagtga
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integrated database retrieval system
