Etheostoma spectabile (orangethroat darter): 116672030
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Entry
116672030 CDS
T08457
Symbol
itgb1
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03271
Virion - Rotavirus
esp04145
Phagosome
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04514
Cell adhesion molecules
esp04530
Tight junction
esp04810
Regulation of actin cytoskeleton
esp04820
Cytoskeleton in muscle cells
esp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
116672030 (itgb1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116672030 (itgb1)
04514 Cell adhesion molecules
116672030 (itgb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116672030 (itgb1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116672030 (itgb1)
04530 Tight junction
116672030 (itgb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116672030 (itgb1)
04810 Regulation of actin cytoskeleton
116672030 (itgb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116672030 (itgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116672030 (itgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116672030 (itgb1)
04515 Cell adhesion molecules [BR:
esp04515
]
116672030 (itgb1)
04090 CD molecules [BR:
esp04090
]
116672030 (itgb1)
Membrane trafficking [BR:
esp04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116672030 (itgb1)
Exosome [BR:
esp04147
]
Exosomal proteins
Proteins found in most exosomes
116672030 (itgb1)
Cell adhesion molecules [BR:
esp04515
]
Integrins
Integrin beta subunits
116672030 (itgb1)
CD molecules [BR:
esp04090
]
Proteins
116672030 (itgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
Anemone_cytotox
Motif
Other DBs
NCBI-GeneID:
116672030
NCBI-ProteinID:
XP_032359468
LinkDB
All DBs
Position
22:21840855..21880096
Genome browser
AA seq
803 aa
AA seq
DB search
MDLKLLLISTLLGVFCYSHAQKEGNECINANAKYCGECIQAGAKCGWCKDPNFLKQGETV
STRCDELQSLIKRGCSDAMIENPHGEQKTLKNKTVTHRKKGAEKLRPEDITQIQPQKLSL
TLRSGEPQTFNLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMLEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSDGKRFNTLVGQQHI
SGNLDSPEGGFDAIMQVAVCGNHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNVYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYQELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIAYTSRCKNGVVSEGESGRKCSNISIG
DEVMFSISVTSKGCPKQGKPEIIKIKPLGFTEEVEITLNFICECECHKDGIKNSQLCHFG
NGTYECGACKCNEGRVGRQCECSSNDVATEDMDRTCRKDNGTDICSNNGDCVCGTCECKK
RDNPEERYSGQFCECDNFNCDRSGNKLCGGHGRCECRVCICDTMWTGSACDCSLDNSTCM
ASNKQICNGRGTCECGTCKCTDPKFQGPTCETCPTCPGVCTEHKECVQCRAFGTGEKKDT
CERDCSYFNLIKVKDRDKLPQPNDASYPVMHCKERDANDCWFYYTYAVNNNTEKEVHVVD
TLDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQE
NPIYKSPINQFQNPSYGRKAAVL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggacttgaagctgctcttgatatccacattgttaggagttttttgttacagtcatgct
cagaaagaggggaacgagtgcatcaatgccaatgccaaatactgcggggagtgcatccag
gcgggagccaaatgtggctggtgtaaagacccgaacttcctgaaacagggtgagactgtg
tcgacccgttgtgacgagctgcagtctttgataaaaaggggctgtagtgatgcaatgatt
gagaacccccacggggaacagaagaccctcaagaacaaaacagtgacacatcgcaaaaag
ggagcagagaaactgaggccagaggacatcacgcagatccagccccagaaactcagcctc
accctccgatctggtgagcctcaaactttcaacctaaagttcaaacgagcggaagattat
cccatcgacctgtactacttgatggatctgtcctactccatgaaggacgatctggagaac
gtcaagaacctgggaacaagtctaatgctggagatgtcaaagatcacctctgacttcagg
ataggttttggttcctttgtggaaaagacagtcatgccatacatcagcaccaccccggcc
aagctgctgaacccatgcaccggcgaccagaactgcaccagcccgttcagctacaagaac
gtgctgaagctgaccagcgatggcaagaggttcaacaccctggtgggccagcagcacatc
tccggaaacctggactctcctgaaggggggtttgatgccatcatgcaagtggctgtgtgt
gggaatcatattggttggaggaatgtgacccgtctgcttgtgttttccactgatgctggc
ttccactttgccggcgatggcaaactgggtggcatcgttctgcccaatgatggaaaatgt
cacttggagaacaatgtgtataccatgagccactactatgattatccctccattgcccac
ctggttcagaagctgagcgacaacaacattcagactatctttgcagtcacagaggagttc
cagcccgtttaccaagagctgaaaaatctgataccaaagtctgcagtgggaactctgtct
gccaactcaagcaatgtgatcaaccttattatagacgcttacaattctctctcgtctgag
gttattttggaaaacagcaagcttccagagggagtgaccatagcttacacgtcccgctgt
aagaacggagtggttagtgagggcgaaagtggacgcaaatgctccaacatctccatcgga
gatgaggtcatgtttagcatcagtgtgacatctaagggctgtccgaaacaaggcaagccg
gagatcatcaagataaagcccctgggattcacggaggaggtggagatcaccctcaacttc
atttgtgagtgtgaatgccacaaggacggtatcaagaacagtcaactctgccactttggt
aacgggacttacgaatgtggtgcctgcaagtgtaatgaaggacgcgtgggcagacagtgt
gaatgcagcagtaacgatgtagccacagaggacatggacaggacctgccgcaaagacaat
ggcaccgacatctgcagcaacaacggagactgcgtgtgcggcacatgtgagtgcaagaaa
agggacaaccctgaggagaggtacagcggccagttctgcgagtgtgacaacttcaactgt
gaccgctctggaaacaaactgtgtggaggtcatggccgctgtgagtgcagagtgtgtatc
tgtgacaccatgtggaccggaagtgcctgtgattgctctctggacaacagcacatgtatg
gccagcaacaagcagatctgtaacggccgaggaacatgtgaatgtggcacttgcaagtgc
actgaccccaaattccagggtcccacctgtgaaacttgccctacctgtccaggagtatgt
actgaacacaaagagtgcgtccagtgccgggcattcggcaccggtgagaagaaggacaca
tgtgagagagactgcagctacttcaacctgattaaagtgaaggacagggacaagctgccc
cagcccaacgacgcctcttaccccgtgatgcactgcaaggagagggacgccaacgactgc
tggttctactacacctacgctgtcaacaacaacacggagaaggaggtccatgtggtggac
acgctggactgccccgccggtcctgacatcatccccattgtggcaggcgtggtcgccggc
atcgtcctgattggcttagccctgctgctcatctggaagctgctgatgatcatccatgac
agaagagaattcgccaagttcgagaaggagaagatgaacgccaaatgggatacgcaagaa
aaccctatatacaagagtcctatcaatcagttccagaatccaagctatggacgtaaagct
gctgtcctttaa
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