Etheostoma spectabile (orangethroat darter): 116672115
Help
Entry
116672115 CDS
T08457
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116672115 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116672115 (nup58)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116672115 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Siah-Interact_N
Nup49_C
PSY3
Tox-ODYAM1
PBC
Motif
Other DBs
NCBI-GeneID:
116672115
NCBI-ProteinID:
XP_032359640
LinkDB
All DBs
Position
22:16485673..16501741
Genome browser
AA seq
600 aa
AA seq
DB search
MSGFNFGSGTLGSTNTGGGFAFGAATSAPVANAGGFSIGTALGTAAASLATSTSTTPSLG
LGGSLFAQKPTGGFSFNTPASSAAAPTAGLTLGAPSTTAASTGFSLAFNKPTASATPFSL
TTTSISSSAPAGAGLSFGSVLTSMAPQQPASAGFSLGLGGTTTTTAATSTGPSLGGSLFA
NTLSAGLGQTTLGLGGGLTLGSLLAASTAVSAAPAPSIGLGGVDFSTSSESKSDTSSGAN
AQDSKALKDENLPPVICQDVENFQKFVKDQKQVQEDISRMSSKAISKVQDDIKSLKQLLS
VSASGLQRQALAIDKLKLETAQELKNADIALRTQKTPPGLQHENTAPSDYFRGLVEQFEV
QLQQYRQQIEELENHLTTQSSGTHITPQDLTLAMQKLYQTFVALAAQLQSVNENVKILKH
QYLSYRRSFLEDSTDVFESKRVSNRKWQSTPRVTTGPAPFSSVPNAAAVAMAATLTQQQQ
PTPGTQAPLGAGYGNPFALAVGTSLGSSTLGGFGGGPGFGGVGTGGSSFAFSSTSKPTGG
SLSAGFGSSSSTGFNFSSNPGINPSAGLTFGVSNPAAAGFGAAPLLQLKKPPAGNKRGKR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctttaactttggatcagggactcttggttctaccaacactggtggaggattc
gcatttggggcagcaaccagtgcacctgtggccaatgctggaggcttctctatcgggact
gctctgggtacagcagccgcaagccttgccacctccaccagtaccaccccatctcttggt
ctcggaggaagtctctttgctcagaaaccaactggaggtttttctttcaacacacctgcc
tcaagcgctgcggctcccactgcaggccttacattaggtgccccatctactacagctgcg
tccactggcttcagcttggcctttaacaagcccaccgcctcagcaacacccttctccctc
accactacttccatttcctcatcagcccctgcaggagcaggtttatcatttggctctgtc
ctgacatccatggctccacagcagcctgcatcggcaggcttcagccttggtcttggtggc
acaacaaccaccacagctgcaacctcaacaggtccatcactgggcgggagtctcttcgcc
aacactttgtctgcaggtttgggtcagaccactcttggactaggcggcgggttaacgttg
ggttctctgttagctgcctccacagcagtatcagcggcccctgcccccagtattggcctg
ggtggagtcgacttcagtacttcctctgagagtaagagcgacacttcatctggagccaac
gcacaggacagtaaagctctgaaagacgagaacctgcccccagttatttgtcaggatgtc
gagaatttccaaaaatttgtgaaagaccagaaacaggttcaggaagacatcagcaggatg
tcatctaaggccatttccaaagtccaagatgacatcaagagcctcaaacagctcctctct
gtcagtgccagcggtctgcagcgccaagccctggccatcgacaagctaaagctggagaca
gcgcaggagctgaaaaatgctgacatagcactgcgtacacaaaagactccccctggactt
cagcatgagaacactgctccatcagattatttccgtggcctggtagagcagtttgaggtg
cagttgcagcagtaccgccagcagatagaagaactggagaaccacctgacaacgcagagc
agtggcacccacatcactcctcaggacctgacattggccatgcagaagttgtaccagacg
tttgttgcgctggctgcccagctccagtctgttaatgagaatgtcaagatcttgaagcac
cagtacctttcctaccgtcggtctttcctggaagactcaacggacgtctttgagtccaaa
cgggtatctaacaggaagtggcagagtacgccgcgagtcacaactgggcctgccccattc
tccagtgtgcccaacgctgcagcggttgccatggcagccacgttgacccagcaacaacag
cctactccagggacccaggcacccttgggggcagggtacggaaacccctttgccttggca
gtgggcactagcttgggctcttctacccttggaggttttggtggtgggccaggatttggt
ggggtggggactggggggtcttcttttgccttctcctccaccagtaagcccacaggaggc
agtctgagtgcaggttttggtagcagcagcagcacaggctttaacttcagtagtaaccct
ggcataaacccctcggcgggcctgacctttggcgtgtctaacccagctgctgcaggcttc
ggcgcagcaccccttctccagctcaagaaacctcctgctggtaataaacggggcaagaga
tag
DBGET
integrated database retrieval system
