Etheostoma spectabile (orangethroat darter): 116672295
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Entry
116672295 CDS
T08457
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
esp03037
]
116672295 (nphp3)
Cilium and associated proteins [BR:
esp03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
116672295 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
AAA_16
TPR_11
NACHT
TPR_19
KAP_NTPase
AAA_22
TPR_6
ATPase_2
AAA
AAA_14
T2SSE
AAA_19
Motif
Other DBs
NCBI-GeneID:
116672295
NCBI-ProteinID:
XP_032359935
LinkDB
All DBs
Position
22:11039931..11052433
Genome browser
AA seq
1301 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEIASMQKKESKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIQVYDLNDSDSDDNQTTVTAAGTQCEYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVPQALWSNTVRCFLIFTQETKAELDVFIKKHSP
VLRRMCEGLGHFYLNVCFPEENAASYAVERKQEIERSSVCVLLVKSTVTSSVVEDCEEAF
VQNPDGHPLVLYLRTEEDHNLTGPTRQLLERVNAADKAAKVKVVDHSGSAEEGAELIYSQ
LEKVIKQELLAIQGEDVDSKDSGIEEGHEEDSDVLWDLHDEQEQIESYQQARSSTTSQLG
FQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIEQLQKQSPNTLFLYHFVGRPL
STSSEPVLIIKRLTVKLLQHFWSISGLSMEPSKILEEFPRWLERLSARHQGNIIIIIDSI
DQIQQAERNMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSPREVKSIVNAEC
QSMDLKLTKDQEKKLERHSRSATTCNALYVTLLARMMISSIAGWSLEKCLEQCLQCQDTM
SLYRLALKMMLNSLNTDREQHIMREILCLVCASHNGVSESEVLDLFPDLELPVLSSVLYH
LNRLCIVTLRCGLIRFQHLQAWEAVRLEFLGGGSSLPSYRQKLIQYFSQQLSQDHVTWRV
ADELPWLLQQQEDRTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFDS
LKHYEKSCESDDTMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSVA
RSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHASVARELESLAMLYQKQNKYEQ
AEKLRKRSVKIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDSADSAKTLNELGVLYYL
QNNLDAAKMFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETSEDMYERALDIR
KRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELSLEIREKSFGPKHPSVATALVNL
AVIYCQLKKHSDALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEKAAELYK
RAMEIKEAEPSLVCGNAPSRHSSSGDTFSLRGPAPLPHAPR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcctctttggtcagcccaggagaggtaattgaggatggatatggaggt
gaaggaggggaagcctgtgagatcccagttgaggtcaagcccaaagcccgactcctgcgc
agttcctttcgcagaggaccccgggtgattggggccagttttaaatccacaggttctgtg
gatctagagtatgctgctgagtatgaaagactccgtaaagagtatgaaatctttcgcgtc
agtaaaaataatgagatcgcatccatgcaaaagaaggagtctaagctggatgaggagaac
aagaggctgagggctgagctacaggctctgcagaagacctaccagaagatccttagagaa
aaagagagtgctcttgaggcaaagtatcaagctatggaaagggctgccacctttgaacat
gacagggacaaagtaaaacgacagtttaagattttccgggagacaaaagaaaaggagatt
caggatctcctgcgcgccaagagggacttggaggccaaactgcaacagttgcaagctcag
ggcattcaggtctatgacctcaatgattcagactcagatgacaaccaaaccacggttact
gctgcagggacacagtgtgagtactggtctggtggtgtgctgggaagtgagccctctatg
ggtagcatgatgcagttgcaacagacattcaggggaccggagtttgcccacagtttgata
gatgtggagggaccctttgcaaatgtgagcagagatgactgggatgctgcagtggccagt
ctgcttcaggtctcccctcatgtaccccaggccttatggagtaacacagtgcgctgcttc
ctgatctttacccaggagaccaaagcagagcttgatgtctttataaagaaacactctcct
gtgttacggagaatgtgtgagggtcttggccatttctacttgaatgtctgctttccagag
gagaatgctgcctcttatgctgtggagcgcaagcaggagattgaaaggagctctgtgtgt
gtgcttcttgtcaaatctactgtcaccagctctgtggtggaagattgtgaggaggctttt
gtgcagaatccagatggccatccactagtgctctacctcaggactgaagaagatcacaat
ttgactggacccactaggcaactgctagaaagggtcaatgctgcagacaaggctgctaaa
gtcaaggtggtggatcatagtggttctgcagaggagggggctgaactgatttattctcaa
cttgagaaagtcatcaaacaggagttgctggctattcaaggagaagatgttgactctaag
gactctgggatagaggagggacacgaggaagactcagatgtgctgtgggacctgcatgac
gagcaggaacagattgagtcctaccagcaggcccgtagcagcaccacctcccagttaggc
ttccagaagtatatagatcgtttgaatgacatgatagctgctccccctcctacccctcct
ctgctggtgtctggtggtccaggctcaggaaagtctctcctgctctccaaatggattgag
cagctgcagaagcagtcccccaacaccttgttcctttatcattttgttggtcgcccactt
tccacaagctcagagccggttctcattatcaaacgcctcacggtcaaactgctgcagcac
ttctggtctatttctggcctgtccatggagcccagtaagatcttagaagagtttcctcgc
tggcttgaaagactatcagcacgccatcaaggaaacattatcattatcattgactccatt
gaccaaatacagcaagcagaaagaaacatgaagtggctgattgaccctctccctgtcaat
gtcagagtggtggtgtccgtcaatgtagagacatgtcctcaagcttggaggttatggccc
acactccatttagacccactgagtcccagagaggtcaagagcattgttaatgcagagtgc
cagagcatggatctcaaacttaccaaggaccaggagaagaaactggaaaggcacagtcga
tctgcaacaacctgcaatgcattgtatgtcacactactggcaagaatgatgatcagcagc
atagcaggttggtcactggaaaagtgcctggagcagtgtctacagtgccaggacaccatg
tcactctaccgtctggcactgaagatgatgctgaactcccttaacacagacagagagcaa
cacattatgagagagatactgtgccttgtgtgtgccagccataatggagttagtgaatca
gaggtactcgaccttttcccggacctggaattgcctgtcctgtcctctgtgctttaccat
ctgaacagactctgcattgtaaccctccgttgtgggctcatcaggtttcaacacctgcag
gcttgggaagctgtgaggttggagttcctgggtggaggaagtagcttgccttcttacaga
cagaaactcatacagtactttagtcagcaattaagccaggatcatgtgacatggcgtgtt
gcagatgaactgccatggctgctccaacagcaggaggataggactaaactacagcttagc
ctcctgaacctgtttgtctcacaaaacctctacaagaggggtcatttttctgagctgctg
gcctattggcaatatgtgggcaaagacaaaagctccatggccactgagtactttgactcc
ctaaaacactatgagaagagctgtgagagcgacgacaccatgaccaagctggcaaacctg
tatgagaccttgggacgtttcctcaaagatctgggcctccctagtcaggctgtagcgcct
ttacagaggtcccttgagattagggagacagccttggacccggaccatcccagcgttgct
cgctctctgcaccagctggccggggtttatgttcagtggaagaagtatggtaacgctgag
cagctgtacaagcaggccctggagataagtgagaatgcatacggagcggagcatgcaagc
gtagcacgagagctggagtcactcgccatgctctatcagaaacaaaacaaatatgaacaa
gcagaaaaactcaggaagaggtcagtgaagatccgtcagaagactgctcgccagaaaggt
catatgtatggctttactttgttgaggcgcagagccctacagctggaagagctgactctg
ggaaaagactctgcagactctgccaagacacttaatgaactgggtgtcttgtactacctc
caaaacaacctggatgcagccaagatgttcttgacccgctctctggagatgcgtcaacgt
gtccttggtccagatcacccagactgtgctcagtccctcaacaacctggctgcactgcac
acagagagaagggagtatgagacgtctgaagacatgtatgagagggcgttagatattcgc
aagagggccttgtccccagaccacccctcactggcatacacactcaaacacctagccatg
ctctataaacgcagaggaaagctggaaaaggctgtgccactgtatgagctgtctctggaa
atcagggaaaaaagttttgggcccaaacaccctagtgtggccacagcactggtcaacctg
gctgtgatctactgccaactaaagaagcacagtgatgccttgcctctttatgaacgagcg
ctgaaagtgtatgaggatagtttggggcgctcacacccacgtgtcggagagactctaaaa
aacttggctgtgctaagctatgaagagggtgacttcgagaaggcagcagagctttacaaa
cgtgcaatggagataaaggaggcagagccatctttggtgtgtgggaacgccccctcccgc
cactcctccagtggggacacgttcagtttgagaggacctgctcccctcccacatgctccg
aggtga
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