Etheostoma spectabile (orangethroat darter): 116672301
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Entry
116672301 CDS
T08457
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116672301 (trpc1)
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116672301 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
116672301
NCBI-ProteinID:
XP_032359945
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Position
22:complement(11100478..11114560)
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AA seq
804 aa
AA seq
DB search
MVAGFYSGMHISVWPYSLSVVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLA
CEKGDYYMVKKLLEENRHGELNLNCVDVLGRDAVTITIENENLDILQLLLEHGCQATDAL
LVAIDSEVVGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEI
LTMLLKQDISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPI
LRAFELSADLRELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDH
LDKRGLLEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATV
LSVAMLWPLLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFSFLLLLNLYSLVYNEGKKN
TMGPALEMIDYLLILWIIGMVWSDVKRLWYEGLEDFLDESRNQLSFVMNSLYLATFALKI
VAHSKFKNVEDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQ
MLQEFGKFLGLFLLVLFSFTIGLTQLYGKDHKDPDKYKPKDCEGIFCQRQSNDAFHTFMG
TCYALFWYIFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSF
RQIANHEDKEWKFARAKLWLSYFDDKCTMPPPFNILPSPKTVCYLVTSMSKWICSHTSKG
KVKRQNSLKEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLS
KFRNEMRDLLGFRTSKYAMFYPRS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctggtttctatagtgggatgcacatcagtgtttggccgtactcgctctccgtc
gtaatggcagctctgtaccagggcacggacgcttcctctccggataaatttctggccttg
aaagacgtgagagaggtgaaagaggaaactacgctggatgagaagctcttcctgctggca
tgcgagaaaggtgactactacatggtgaagaaactgctggaggagaacagacatggcgag
ctcaacctcaactgcgtagatgtgctgggacgggatgccgtcaccatcaccatcgagaac
gagaacctagacatcctgcagcttcttctggaacatggctgccaggcaacagatgccttg
ttggtggccatagactctgaggtggtgggagctgtggacatcctcctcaaccacagaccg
aggcgatcctccaagccctccattgctaaactgatgcagcggattcagaacccagagtat
tctaccaccatggacgtggctccggtcatcctggcagcccacagaaataactacgagatc
ctgactatgctgctgaaacaggacatctcgcttccccggccccatgctgtaggctgcgag
tgcacactctgcaatgctaaaaacaagaaggacagcttacgacactcccggttccgcctg
gacatctaccgctgcttggccagcccctctctgatcatgctgactgaggaagatcccata
ctcagggcctttgaactgagtgcagacctcagggagctcagcctggttgaggtggagttt
aggaatgattatgaggagctggcaaagcagtgtaagatgtttgccaaggacctgctggct
caggctcgaaattctcgagagctagaagtgattcttaaccacacatccaatgaggatcac
cttgacaagagaggcttactggaagagcgaatgaacctcagtcgactcaagcttgccatc
aaatacaaccaaaaagagtttgtggctcagtccaactgtcaacagttcctcaacaccgtc
tggtttggagagacggccagctaccggcgcaaacacacttgtctaaagatggccacggtg
ctgagcgtggcgatgctttggccgctgctctctgtctgctaccttctggtgccacgctcc
cgtgtgggccagatcatccacacgcccttcgttaagttcatcatccacagcgcctcctac
ttctccttcctgctgctgcttaacctgtactctctggtctacaatgagggcaagaaaaac
accatgggccctgcgctggagatgatagattacctgctcatcctctggatcataggtatg
gtgtggtcggatgtgaagcgtctgtggtacgaagggctggaagactttctggatgagtca
aggaaccagctgagcttcgtgatgaattccctttacctagccacctttgccctcaagata
gttgctcacagcaagttcaagaatgtggaggacacagagaggaagaactgggatgccttc
catcccatcttggtggctgagggcctgtttgcctttgccaacgttctaagttacctgcga
ctcttcttcatgtacaccaccagctccatcctggggccgctacagatctctatgggtcag
atgctgcaagaatttggaaagtttttgggcctcttcctgttggtgttattctccttcacc
attggactgacccagctttatgggaaggaccacaaagacccagacaagtataaaccaaag
gactgcgagggaatattctgccagcgacagagcaatgatgcattccacacgtttatgggg
acctgctatgctctattctggtacatcttctccctggcacacgttgcgctcttcgtcacc
cgcatcagctacacagaggagctgcgctcttttgtgggcgccatgatcataggcacctac
aacattgtagtggttattgtgctgaccaagctgctggtggccatgctccataaaagcttc
agacaaattgctaatcacgaggataaggagtggaagtttgctcgggccaaactgtggcta
agctactttgatgacaagtgtaccatgcctccaccgtttaatatcctcccatccccaaag
actgtctgctacctggtgaccagcatgagcaagtggatctgttcgcacacttcaaagggc
aaggtgaagagacagaacagcctcaaggagtggaagaacctgaagcaaaagcgtgatgag
aactatcagaagatcatgtgttgtctggttcatcgctatttgacctccacgcggcaaaag
atgcagagcacagaccaggccacggtggaaaatctgaatgacctgcgccaagacctgtcc
aagtttcgcaacgagatgagggacctgctgggcttccggacatccaaatatgccatgttc
tacccaaggagctaa
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