Etheostoma spectabile (orangethroat darter): 116672387
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Entry
116672387 CDS
T08457
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116672387 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
esp01002
]
116672387 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116672387 (shh)
Peptidases and inhibitors [BR:
esp01002
]
Cysteine peptidases
Family C46: hedgehog family
116672387 (shh)
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Morphogens
116672387 (shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Vint
PT-HINT
DUF7764
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
116672387
NCBI-ProteinID:
XP_032360098
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All DBs
Position
22:10656250..10664830
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AA seq
413 aa
AA seq
DB search
MLLWTRIVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTKKAVKHLQTGDRVLAADDDGNPIYTDFIM
FIDQDSTTRRLFYVIETDSGQKITLTAAHLLFVGHNTTGEERMSAIFASQVQSGQKVFVF
DGERSRLEPVTVKRIYTEEHYGSFAPVTVQGTVVVDQVLASCYAVIEDHDLAHWALAPIR
LAHCVSSWLFRSQPQVSAQNDGMHWYSKILYQLGTWLLDSHSIHPLGMSVYPS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgtattggtcggtctcatctgcttatccttggtgtcatct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctgggggcaagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacactgacatcattttcaaggatgaggagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagttgaactctctggccatctcagtgatgaatcagtggcctggtgtg
aagctgcgggtcacagagggatgggacgaagacggacaccacttcgaggagtcgctccac
tacgagggcagggcggtggacatcaccacctcggacagagacaagagcaaatacggcact
ctgtccaggctggcggtggaagccggattcgattgggtctattatgaatccaaagcccac
attcactgctctgtgaaagcagaaaactctgtggcagcaaagtcgggcggctgcttccca
ggctcctccacggtcacccttcaggatggtaccaagaaggcggtcaaacaccttcaaacc
ggcgacagagtcctggcagcagatgacgatggaaacccgatttacaccgacttcatcatg
ttcatagaccaagactcgacgaccaggaggctcttctacgtgatcgaaaccgactcgggc
cagaaaatcaccctcaccgccgcgcacctcctcttcgtcggccacaacaccacgggagag
gagcggatgtcggcgatcttcgccagccaagtccaatctggacaaaaggtgtttgtgttt
gatggtgagcgaagtcgactcgagcctgtgaccgtaaaacggatttacacggaagagcac
tacggctcttttgcgccagtgaccgtgcaggggaccgtcgtggtggaccaggtccttgcg
tcctgttacgcagtgatcgaagaccacgatctggcgcactgggccctggcacccatcagg
ctcgcccactgcgtgtcctcgtggcttttccgttctcagcctcaagtcagtgcacagaac
gacggaatgcactggtactccaagatcctgtatcaattaggaacttggctcttggacagc
cactcgatccatccacttgggatgtcagtttatccaagttga
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