Etheostoma spectabile (orangethroat darter): 116672452
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Entry
116672452 CDS
T08457
Symbol
myom1
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116672452 (myom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116672452 (myom1)
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116672452 (myom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
FN3_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Ig_RIMBP2
Ig_CD22
C2-set_3
Adeno_E3_CR1
SirA
Vma22_CCDC115
Motif
Other DBs
NCBI-GeneID:
116672452
NCBI-ProteinID:
XP_032360209
LinkDB
All DBs
Position
22:9665584..9698016
Genome browser
AA seq
1606 aa
AA seq
DB search
MSGSLPFYQKHHRHYDHGYRSRETESKLSQYQTSSRYTAGSSTSATRTSRGLKVSSHSGL
EASRLSPVLKRAKPTYLAVDKENQIIGYVVPIFRGSQEFGFSNTEEARVRDTSAYMARRD
LFTSGLEMERSEQISRREAMRESAERISLNKRIHEHGEHFKRMNEDSLMHAPEFVIKPRS
HTVWEKQCVRLHCTVSGWPDPRVVWYKNNVAIDPIGNAGKYKLESRYSVHSLEINRCDFD
DTAQYRVSAMNSKGELSAYASVVVKRFKGEIDESLPSPRRASTEDGPVSEYGINFQTHIV
DKFGVSFGREGEIMSLGCTVIIYPALHHYQPEIQWYRDDVLLSPSKWNHMHWSGDRATLT
LTHLNKEDEGLYTLRVTTKSGYETYSAYVFVKDADAEVERAPGAPLDVRCLDANKDYIIV
TWKQPAVDGGDSILGYFVDRCEVGTNHWIQCNDTPVKFARFPVTGLVEGRSYLFRVRAIN
KSGMSRPSRISEPVAAMDPSDRARMRGTSAPWTGQIIVTEEEPAEGVVPGRPLELQVTEA
TKNYVVLSWSPPGEKGLEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSYS
FRVRCCNSAGVGEPSDPTEAITVGDKLDIPSAPSKVVPTRNTDTSVVVSWVASSEAKELV
GYYIEGSIVGSNVWEPCNNKPVKATRFICHGLITGEKYVFRVRAVNAAGLSQFSPESEAV
EVKAAIGGGIPHASPAPPYGITVLECVCDSMVLAWKQPSFIGGADITGYFVDYREVIDGV
PGKWHEANIKAISERAYRVSDLKENKKYQFQVRAANMAGVGIPSLPSNTFLCEEWTIAVP
GPPHDLQVREVRSNSLVLLWKPPVYQGRDPVNGFYVDIKEEDAPEEVWRGVNNKATEKTY
IKIKNLKEGERFVFRVRAQNKAGVGECSDVTEPVLALTKPGTKEIEVDVNDDGIISLNFE
YGDLTPDSKFVWSKNYEEITDQSRLTIETKGNKSKAIFNTPGEEDIGIYSCLVTHTDGAS
SSYTLSEEELKRLLEVSHDHKFPIIPLKSELAVELLEKGKVRFWLQADKISANGKVDYIF
NEKALSQGEKYKMNFDKNTGVIEMIMESLTPADEGTFTFQLQDGKATNQSSLVLIGDVFK
ELQKESEFQKKEWVRKQGPHFIEYLGYEVTPECCVILKCKVGNMKKETSAHWYKDGREIK
SDEHLGFTEGVLKLEIAQRGSPAGTADYADDLIWRRLKISKKDAGVYEVVLKDDRGKDTS
TLNLTDQGFKDLMNEVFSFIANSSTPLKITSTDQGIRLYTFVSYYNDLLQVTWHYKDSAI
AFSDRIKSGVVGEQLWLQITEPTEKDMGKYAIEFNDGKGGLRRTVELSGQAFDDAFAEFQ
RLKAAAVAERSRARVAGGLPDVVTIQEGKALNLTCNISGDPVPEVTWLKNDKEITSDDHC
ILKFSSGKFASFTITGVNMSDSGKYSILVKNKYGTESGDFTLEITEGTPDLGVTSYSTDA
EGNVVFGPNTPKERMKTTVTGIKKQKRKGDSVTKTLQMEKVEDKDKGKATVEPKASDSEQ
TEKAKEEVAEQPLTADQSEAPEQPADRVEEPGPVAETQPETWSESN
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatctttgccattctaccagaagcaccatcgccactatgaccatggctacaga
agcagggagacagagtctaaactcagccagtaccagaccagcagcagatatactgctggc
agcagcacctcagccaccagaacgagtaggggacttaaagtgtcttcacattctgggctg
gaggcgagcagactgagccctgtactcaagagagccaagccaacttacttggctgtggat
aaagagaaccaaatcatcggctacgtagtgcctatcttcaggggcagtcaagagtttgga
ttttcgaatacagaggaagcaagggtgagggacacttctgcatacatggcccgaagggat
ttgttcaccagtggcctggagatggagaggtcagagcagatctccaggagggaagccatg
cgcgagtcggcggaacgcatctctctaaacaaaaggattcatgaacacggggaacacttt
aagcgcatgaacgaagacagcctaatgcacgccccggaatttgtgattaaaccacggtcc
cacactgtgtgggagaagcagtgtgtgcggctgcattgcactgtcagtggctggcctgac
ccacgagtcgtctggtacaaaaacaatgtggcaattgacccaattggcaatgctgggaag
tataaacttgagagcagatacagcgtgcactcactggagattaacagatgtgattttgat
gacacagcgcagtatcgcgtctctgccatgaactccaagggagagctgtctgcatatgcc
tctgtcgttgttaaaaggttcaaaggtgaaattgatgagtccctgccatcccccagacgg
gccagtactgaagatggcccagtgtctgagtatggcatcaacttccagactcacattgtt
gataaatttggtgtgtcgtttggaagagagggtgagatcatgagtctgggatgtacggtc
atcatttaccctgccctgcaccactaccagccagagatccagtggtacagagacgatgtt
ttgttgtctccttctaaatggaaccacatgcactggagtggagatcgagccacgctgaca
ctcacacacctcaacaaagaggacgaggggctctacaccttgcgtgtcaccaccaagtct
ggatatgaaacctactccgcctacgtctttgtcaaagatgctgatgctgaggttgaaaga
gctcccggtgcccctctggatgtgcgctgtctggatgccaacaaggattacattattgtc
acctggaagcagccagctgtcgatggaggcgactccatcctgggctactttgtggacaga
tgtgaggttggaaccaaccactggatccagtgcaatgacactccggttaagtttgcccgc
ttccccgtcactggcctagtggagggccgttcctatttgttccgtgtgcgcgccatcaac
aagagtggcatgagccgcccatcccgaatctctgagccagtggctgctatggacccatca
gaccgcgcccgcatgagaggtacatctgctccctggactggccaaatcattgtcacggag
gaggagcctgcagagggtgttgttcctggcagacctcttgagctgcaggtgacagaggca
accaagaactatgtggtgctgagctggagcccacctggagagaaaggcctcgagggtgtc
atgtactatgtggaaaagtgtgtttcgggcacagacagctggcagagggtgaacacagag
atcccagtcaagtctcctcgctttgcactgtttgatctcgccgaggggaaatcctacagc
ttccgcgtccgatgttgcaactctgccggtgtcggcgagccatctgacccaacggaggcc
atcactgttggcgacaagcttgatatcccatctgctccaagcaaagttgttcctaccaga
aacacagacacatcagttgttgtgtcttgggtagcgtctagtgaggccaaagagttggtg
ggctactacattgaggggagcattgtgggcagcaatgtgtgggagccatgcaacaacaag
cctgtaaaggctactaggttcatctgccatggtctgatcacgggagagaagtacgtgttc
agggtgagggcagtaaacgcagcagggctcagccaattctccccagagtctgaggctgtg
gaggtgaaggctgctatagggggcggcatccctcatgcttcccctgctccaccctatggc
atcactgtcctggagtgtgtgtgtgactccatggtgctggcctggaaacagccgagcttc
attggcggggcagacatcactggctactttgtggattaccgtgaggtcattgatggcgtg
ccggggaagtggcacgaggccaacatcaaggctatcagcgaaagggcctacagggtgtct
gacctaaaggagaacaagaagtaccagttccaggtgcgtgcagccaacatggcaggtgtc
ggcatcccttcactgcccagtaacaccttcctgtgcgaggagtggaccatcgccgtgcca
ggacctcctcatgacctgcaggtaagagaggtgcgaagcaactctctggtgttgctttgg
aaaccacctgtgtaccagggccgcgatccggtcaacggattctacgttgacatcaaggaa
gaggatgcgccagaggaggtgtggagaggagtcaacaacaaggctacggagaagacgtac
atcaagattaagaatctgaaggaaggagagaggtttgtgttccgtgtgcgcgctcagaat
aaagccggtgttggagaatgctccgatgtaacagagccggtcctcgctctcaccaaacca
ggcaccaaggagatagaagtagatgttaatgatgatggcatcatctccctgaactttgaa
tacggtgacttgacccccgactctaaatttgtgtggtccaagaattacgaggaaatcaca
gaccaatcccgcctgacaatagagaccaagggaaacaaatccaaagcgattttcaacact
cctggggaggaggatattggcatttactcatgtcttgtcacacacactgatggtgcttca
tccagctacactctttctgaggaagagttgaaaaggctgctggaggtcagtcatgaccac
aaattccccattattcccctgaagtcagagttggctgtcgagctgctggagaaggggaag
gttcgcttttggctccaggcggacaagatttccgctaacggcaaagttgactatatcttc
aacgaaaaagctctctctcagggcgagaaatacaagatgaactttgacaagaacaccggc
gtgattgagatgatcatggagagtctgacgccggcagatgagggcaccttcaccttccag
ttgcaggatgggaaagctaccaaccagtccagcttggtactgataggagacgtgttcaag
gagctgcagaaggaatcagagttccagaagaaagaatgggtcagaaagcaaggtcctcac
tttatcgagtatttgggttacgaagtgacaccggagtgctgcgttatactgaaatgcaag
gtcggcaacatgaagaaggagacctctgcccattggtacaaagatggacgtgagatcaaa
tcagacgagcatctcggcttcactgagggagtgctgaaactggaaattgctcagcgcggc
tcccctgcaggcacagcagactatgccgacgacctaatctggagaagactaaaaatttcc
aagaaggacgctggtgtgtatgaggtcgttctgaaggatgacagaggaaaggacacttct
acattgaatttgacggatcaaggtttcaaggacttgatgaatgaagttttcagtttcatc
gccaattcctccactccactgaagatcacaagcacagatcagggcatccgcctctacaca
tttgtcagctactacaacgatttactccaagtgacatggcactacaaggattcagccatt
gccttctctgaccgtataaagagtggtgtggtgggagagcagctgtggctgcagatcaca
gagcccacagagaaagacatgggcaaatatgccattgagttcaacgatggaaaaggtggc
ctgagaaggaccgttgagctgtctggtcaagcatttgacgatgcttttgcagaattccag
agactcaaagctgctgctgttgcagagagaagtcgtgctcgagtagcaggaggcctgcct
gatgtggtcactatacaagagggcaaggctctcaatctcacctgcaacatttcgggcgac
ccggtgccagaggtcacatggctgaagaatgacaaggagatcacgtccgacgaccactgc
atcctcaagttttcgtcaggcaagtttgccagcttcaccatcaccggcgtgaacatgtcg
gactcgggcaagtacagcatcctggtgaagaacaagtacggcacagagagcggggacttc
accctcgaaatcacagagggaacacctgacttgggggtaacttcatactcgactgatgca
gagggaaatgtggtgtttggcccaaacacccctaaggaaaggatgaaaaccactgtaact
ggaataaaaaagcagaagcgaaagggtgattctgtaactaagactcttcaaatggaaaag
gttgaagacaaagataaggggaaggctacagttgaacccaaagcttcagattcagaacaa
acagaaaaagcaaaagaagaagttgctgagcagcctttgacagctgaccaatcagaagcc
cctgagcagcctgcagacagagtggaggagcctggaccagtagctgaaacacagccagaa
acatggagtgaatctaattga
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