Etheostoma spectabile (orangethroat darter): 116672774
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Entry
116672774 CDS
T08457
Symbol
lum
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
esp00535
]
116672774 (lum)
Proteoglycans [BR:
esp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
116672774 (lum)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_14
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
116672774
NCBI-ProteinID:
XP_032360517
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Position
23:14269756..14273896
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AA seq
343 aa
AA seq
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MFPLRVPLLAVLVSVALSQYNDYYDYQPNFMQGPSGPNCNQECDCPINFPTAMYCDSRKL
KFVPVVPTGIKYLYLQNNQIEEIKAGVFDNVTDGLRWLVLDYNQITNAKIAKGTLDKLTG
LEKLFFSYNNLTEPVVPPSKSLDELKLMHNMLSKFPSGLLTDKENLTSINLQHNQLTSDA
IGGAFKGPKKLLSLDVSHNKLKKLPAGVPSSLEILYADYNEIDSVGAGYLNKMPSLQYLR
ISNNKLVDSGLPSGVFNVTSLVELDLSFNKLKSIPEINERLEQLYLQANEINKFDLASFC
KYVTPVNYSHLRHLRLDANNITQSSMPYDSSNCLRQLSDVMFE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttccctctccgtgtacccttgttggccgtattggtcagcgtggccctgtctcagtat
aatgattattatgactaccagcctaattttatgcaaggaccctcagggcccaactgtaat
caagaatgcgactgcccaatcaacttccccactgccatgtattgtgacagccgcaagctc
aagtttgttccagtagtcccaacagggatcaagtacctgtacctccagaacaaccagata
gaagagatcaaggcaggagtgtttgataatgtcactgatggacttcgctggctggtactt
gactacaaccagattaccaatgctaagatagcaaagggcacactcgacaaacttacaggc
ctggagaagctattcttcagctacaacaacctgacagagccagttgtccctccctcaaag
tcccttgatgagctgaagctaatgcacaacatgttatccaagttcccctctggactcttg
actgacaaggagaacttgacctccatcaacctacagcacaatcagctaacgtccgatgcc
atcgggggggcgttcaaagggccaaagaagctgctgtccctggacgtgagccacaacaag
ctgaagaagctgcctgccggagttcccagttcactggaaattctctacgctgactacaac
gagattgacagtgtcggagcaggatacctgaacaagatgccctcgctgcagtacctaagg
atctccaacaacaagctggtggactctggactcccttctggagtgttcaatgtgacatca
ctcgtggagctggacctgtctttcaacaaactgaagtccatccctgagatcaacgagcgg
ctggagcaactctacctccaggccaacgaaatcaacaagtttgacctggcaagtttctgc
aagtatgtaactcctgtcaactattcccacttgaggcatctgcgtctggacgccaacaac
atcacacaaagcagcatgccctatgactcctccaactgcctccgccaactttcagatgtc
atgtttgaataa
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