Etheostoma spectabile (orangethroat darter): 116672789
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Entry
116672789 CDS
T08457
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esp03009
]
116672789 (utp20)
Ribosome biogenesis [BR:
esp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116672789 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
116672789
NCBI-ProteinID:
XP_032360543
LinkDB
All DBs
Position
23:complement(4663907..4690463)
Genome browser
AA seq
2808 aa
AA seq
DB search
MKIKSKSSYHKSENTYRFLTFAERLANVNIDVIHRIDRTGSYAEEVETYFSEGLTKWRDL
NLTEHFTTFLKEVSNQSQSFNMLVFHQKSIVESLKMHLAVKNSLAYQPLLDLVVQLARDL
QTDFYPHFPDFFILITTLLETKDTEVLEWAFTCLSYLYKYLWRLMVKDMTNIYSLYSTLL
EHKKEHIRKFAAESFSFLMRKVPDLDGLLSHVFSDLQEHPDKAEGAGQLLFEMCKGVRNM
FHSCAANALRVALRKLGPSTNPAASLPWDTVRDALDHMAQAAANHIDRQHFLVLWESLQV
SVVEVLGVMEKKGQEAAQQLERLLFILHTLVSHKDGAKITKPEAVCQTVLMLIQSSSLSA
SCSRLLLQITSSLLLGENVTLPKALIQETVQKVFGSTMGQDVILEFTKEMFTMKQFEQLF
LPSLLRFTAGLFGCSDHLSRHCGLDALVSLILAKAPPPTDGSMAFETYPLLFTGQTTGRG
FSSKEAGEASNAISEQPAVPEMVLSLIQFPEEQDHSISDLSLPWAALVLLPHLRPIAPAS
VVPAVTAYLNHLLCEIETEKLGKAGLFVARQALSCLLTLDGSAQLLSLVTVDKINSILRR
FPTDLSALLLGDLYYTRLSLSGVSEHLSHSALLELHQILHANLSSNISKIRLLTLRILSH
FEAELPPQSEGEENVEVQPVFAVCLQAELVPASVQDYRDKLLHLRKLRHDLVQRSLPQGP
PGTFQQVPLRYLIAMLFVNFRPLWDAVIELLVSHARGMDNKDFWRVYHEQLEMVAGLAEK
ELQDSGEDDEEEECGLQGEPGCDVIERGDLGVLFLEQLKLTSNPNERTDFPNFRSLLWRC
MTEFPDRVEPRSRELSPLLLRFIRNEFYPADLLVAPTQDLRKVSDADLEESGMAVEEEEE
REEEEQEAQEGGRQQRKALPRRAAAKQLIVHLKVFAKFTNPRSLYMESRLSELYNQLLCH
QDQQIQRVALECVLTYKDSNIVPYKENLERLLDDKHFKEEIVHFNITEETGVVNASHRAK
LIPLLMRILFGRLRSKAGSKFQGKASASTRSSIILRFLAGCQAEELGIFIDLLLEPVCHH
SQGSCLAAVEKAVAETDVAAVLPLGRQHSLLNIINVLIQKLGHLIHSYLPKVLQILLCVT
ASVSTLLDNNRDQLRAGCISPLKNLRRLGILRIQDFFDGFDSYSFSEDELDAVFQAVIWP
QVCRLPTESPYSPTPLLKLIHVWCKNARFFPLLAKQRPNQPECDILLNVFGLLSAKNASP
VTIAMVMDIAESLATAEDFVATEAETELSVNGCVFPEPKEGALVTAVSLSKGSRVLLPHV
STLLQYLSGVVRNTERLRKKKFRAHVAKELNILSKVSRFVSDREQSSVLISLLLPYLQKC
HNPEETEIDVLATVQNLLRQCVQPSAFLRPLSKLFSIIHNKLPRQALTNVFQTLSDLEPS
LAYITDLATKLNAFDSRHLDEIYFDVRLAAFQDATNRVKNMTTLDLDYISTIMHNCFHTF
EIGDMSLGDNATLCLSAVITQLAAVGAGEQLYKDIVQHTILDAVHKGLRSKTESVQHEYT
SVLACLVKTFPTRKEFRDLVQLTNYNDLESDFFEHMKHIQIHRRGRALRKLAKQLTEGQV
VMTPRSLQNYIMPYAMTALLDEKMLKHESMISASVEVVGAVCRRLTWSKYLYYLKHFVHI
LQTAQAEQKLAASLLVTVLEAFHFDHNTLNREMEAAKAREAGSVAVDADDEEQAAADESD
ASDDEETMEVDGKTAPSDIAMGTDTTSGSKDVLCKEAATLEAKRPGAPSKPSALASGLPQ
SKEELESLISGIHTTVSNSVLPRLHKCLTAKIKRDDEHKAVKSKDVKDEEVARIPIAFAM
IKLMQSLPIHIMEANLPGILIKVCVVLRNRFQEIRDVARGTLVKIIETLGCKYLQYLLKE
MQGLLAKGYQVHVLTFTVYQLLSVLSPTLKSGDLDPCMNMLIDIFNNELFGPVAEEKEVK
GIVSKLMEARHSKSMDSYELLARFCSKESVTKLILPLKEFLENSCSLKVCNRVSAVLRRL
VLGLLVNEGMTSHDILLLCHSLVSQSLPLLTKRDREKASAKPPPDPRLPPPSCLLLPPTP
KRGGQKAPVSSRTNMHILVDAGLKLLHLSLKKSKVTSSEASALEMLDPFVLLLLDCLNSM
HVKVITEALVAFTWLLKFPLPAVEQNADELTKHLFVLLKDYSKAGAARGENYNLVQNCFK
AITILVKNVKSNQISETQLQVLLGYAEEDIYDQSRQATAFGLLKAILSRKLIVPEMEQVM
KKVAKLSVTGSNAMIRIHCRQIYLKYLLDYPLGKKLREHLDFVVAQLPYEHDTGRESVLE
MLAYIFQTFPQKLLLQHSGLFFAPLALVVVNDDSARCKKMAAMAIKTLLTKLDLNNQNTL
FSLVTTWLNAEKASLRRLGAQVCGLFVEVEEERFARRMDDLLPLLEKEINPDNYEDIEEE
QEERGADRLLFSFLTLITKLSQHCGLLELSKPHDTLSRIWGHIEAHLRYPHCWVWLTASQ
LFGQLFAAHQAEQLVALWRGEEMDASPLSPATAFITSRLDKRMRELALCFCHQLQSKFLD
TASGEQVIKNLLFVGKVIYLVSPECDITPPQEEVKEREEQQRENEEEEEEEVEDKDDRPP
SLLWLMKKLSLMAKREAAYTPKVPLKRTCVFKFLGAMAMDLGKERLGPYLATIITPLYRE
LDSTYADQDPTLKNLAQELIELLKRHVGLERFSLAFSAVQKEFSQRRVTRKRHRAMQAVA
NPEIAAKKKLKKHKNKIEAKKRKIEFLRPGYKAKKHRSHALKDLAMVQ
NT seq
8427 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaaatccaagtcttcgtatcacaagtctgagaacacgtacaggtttctcacg
tttgctgaaagacttgccaatgttaacattgatgtcatccatcgcattgacaggactgga
tcttatgcagaggaagtagaaacatacttttctgaaggactgacaaaatggagagacctc
aacttgaccgagcatttcactacatttttgaaagaggtttcgaaccagagccagtcattc
aacatgctggttttccatcagaagtcgatagtggagagtctgaaaatgcacctggctgtc
aagaacagtctggcctaccagccactgctagatctggtggtgcagctggccagagacctg
cagactgacttctacccccacttccctgacttcttcattctgatcaccacactgctggaa
accaaggacacagaggtcctggagtgggctttcacctgtctctcctacctctacaagtac
ctgtggaggctcatggtgaaggacatgaccaacatctacagtttatacagcacactgttg
gagcacaagaaagagcacatccgcaagtttgcagcagagagtttctcttttctgatgaga
aaggttccagatcttgatggcctgctgagtcatgtgttctcagatctgcaggagcacccc
gacaaggcggagggagcaggtcagctgctgttcgaaatgtgcaaaggagtccgaaacatg
tttcactcctgcgctgcaaatgctctccgtgtagctttgcgtaagctcggaccctcaacc
aacccagcagcctcgctgccgtgggacactgttagggacgctttggatcacatggcccag
gctgcagccaatcacattgacagacaacacttcctggttttatgggagtccttacaggtc
agtgtggtggaggttctgggtgttatggagaagaaaggacaagaagcagcccagcagctg
gagaggctgctgttcattctccacaccctggtgtcccacaaggatggagcaaagatcacc
aagccggaggctgtctgccagacggtgttgatgctgattcagagctcgtctctgtcggct
tcttgttcccgtttgctcctccaaatcacctcctctctgctcctcggggagaacgtcaca
ctgcccaaagcactcatccaggagacggtccaaaaggtgtttggcagcacaatggggcaa
gatgtgatactggagttcaccaaggagatgttcaccatgaaacagtttgaacagctcttc
ctccccagcctgttacgcttcaccgctgggttgtttggctgcagcgatcacctgtctcgc
cactgtggcctggatgcactggtcagtctgatcctcgccaaagccccgccccccacagat
ggctccatggcctttgaaacctacccgctgctcttcaccggacagaccacaggcagaggg
ttcagcagtaaggaggcaggtgaggccagcaatgcaatatcagagcagcctgcggtgcca
gagatggtgctgtcgctgatccaatttcctgaggagcaggaccattccatctcggatctg
tcactgccttgggccgccctggtgcttctgccacacctcaggcccattgctccagctagt
gttgttcccgctgtgactgcttacttaaaccaccttctgtgtgagattgagacagagaaa
ctgggaaaagctggtctgtttgtagccagacaggccctgagctgcctcctcactctggat
ggctctgcccagcttctctcactggtcactgtggacaagatcaactcaatactacggagg
tttcccactgacctgtctgccctgctgctaggagacctgtactacacccgcctgtcactc
agtggggtttcagagcacctatcccacagtgcactactggagctccaccagatactgcac
gccaacctctcctccaacatctccaagatccgcctgctgactctaaggattctctctcat
tttgaggcagagcttcccccacagtctgagggtgaggagaatgtggaggtgcagccggtg
tttgcagtttgcctgcaggcggagctggtgccggcgtctgtgcaggactacagagacaag
ctgcttcacctccggaagctgagacacgacctagtgcagcgcagtctgccccaggggccg
cccggaaccttccagcaggtgcctctgcgttaccttatcgcaatgctgtttgtcaacttc
aggccactgtgggacgcagtaattgaacttctcgtgagccatgccagagggatggacaac
aaggacttctggagggtctaccatgaacaactggagatggtggcgggactggctgaaaaa
gaattacaggacagcggcgaggatgatgaagaggaagagtgtggtcttcagggcgagccg
ggctgcgacgtcattgaaaggggagacttgggggtactgttcctagagcagctgaagttg
acatccaaccccaacgagaggacggacttccctaacttccgcagcctgctgtggcgctgc
atgacggagtttcctgacagagtggagccacgcagccgggagctgagcccgctgctgctc
aggttcatcaggaatgagttctaccccgccgacctgctggtggcacccactcaggacttg
aggaaggtgagtgacgctgacctagaggagtctgggatggctgtggaggaagaggaggag
agagaggaagaggagcaggaggcgcaagagggaggcagacaacagaggaaggctcttcca
aggagagctgctgcaaaacagctgattgtccatctaaaggtgttcgctaaattcaccaac
cctcgctccctctacatggagagccgcctcagtgagctctataaccagttgctctgccat
caggaccagcagatccagcgtgtggcactggaatgtgttctcacatacaaagactccaac
atagtgccatacaaggagaatcttgagaggctactggacgacaaacacttcaaagaggag
attgttcatttcaacattactgaggaaacaggagtggttaatgcttcgcacagagccaaa
ctcatcccactgctcatgaggatcctgtttggccgtctgcgcagcaaagcaggaagtaag
tttcaggggaaggcgagcgcctccacccggtcctccattatcctgcgtttcctggcaggt
tgccaagctgaggagctgggaatattcatcgacctgctgctggagcccgtctgccatcac
agccaaggttcatgcctggcagcagtggagaaagccgtggcggagacggacgtggctgcc
gtcctgccgctgggccgtcagcacagcctgctgaacatcatcaatgttctgatccagaaa
ctgggccacctcatccacagctacctgcccaaggtgctgcagatcctgctgtgtgtcacc
gcctctgtgtccaccctcctggacaacaaccgggaccagctgcgcgcaggttgcatcagt
ccactgaagaacctgaggcgactcggtatcctgaggatccaggactttttcgacggcttt
gactcctacagcttcagtgaagacgagctggatgctgtcttccaggctgtcatctggcct
caggtgtgtcgcctccccacagagagtccttactcccccactcctctactaaaactcatc
catgtgtggtgcaaaaatgccaggtttttcccccttttggccaaacagaggccaaaccag
ccagagtgcgatattctccttaatgtcttcggcctcctctcagccaaaaacgcttcccct
gtgaccatcgccatggtaatggacatagctgagtccctagcaaccgctgaagactttgtt
gccacagaggccgagacagagctaagcgtcaacggctgtgtgttcccggagcctaaagag
ggcgctctcgtcaccgcagtctcattaagtaagggctccagagtgctgctgcctcacgta
tccacgctgctgcagtacctcagtggagtcgtacgcaacaccgaaagactcaggaagaag
aagttcagggcacacgtggccaaagagctcaacatcctctccaaggtcagtcgatttgtg
agtgacagggagcagagctcggtgctcatcagcctgttgctgccctacctccagaaatgc
cacaatcctgaagagacagaaatcgacgtcctggccacagtgcagaacctgctgcgacag
tgtgtgcagccctcggccttcctgcggccgctcagcaaactcttctctatcatccacaac
aagctgcccaggcaggccctcactaatgtcttccagactctgtcagatctggagccttcc
ctcgcgtacatcacagatttagcaacaaagttaaacgcgttcgacagtcgacacttggat
gagatctactttgacgtgcgtctggcggcgttccaagacgccaccaacagggtcaaaaac
atgacgactctggacctggactacatcagcaccatcatgcacaactgcttccacaccttt
gagattggtgacatgtcgctgggagacaacgccaccttgtgtctgtcggcagtgatcacc
cagctggcggcggtcggggctggagagcagctctacaaggacattgtacaacacaccatc
ttggacgctgtacacaaggggcttcgcagcaagacagagagtgtgcagcatgaatacacg
tcggtgctggcctgcctggtgaagacctttcctaccaggaaggagttcagagacctggtg
cagctcaccaactacaatgacctcgagtctgacttcttcgagcacatgaagcacatccag
atccatcgtcggggccgtgccctgaggaagttagccaagcagctgactgagggccaggtg
gtgatgacaccgcgttccctccagaattacatcatgccgtacgccatgaccgccctgcta
gatgagaagatgctcaagcatgagagcatgatatcggcgtctgtggaggtggtgggcgct
gtctgtcgaaggctgacatggtccaagtacctgtactacctcaaacactttgtccacatc
ctgcagacagcacaggcggagcagaaactggctgccagtttgctggtcacggtgctggag
gcttttcattttgaccacaacaccctcaacagagaaatggaggctgccaaggccagagag
gccgggagtgttgcagtggacgcagatgatgaggagcaagctgcagccgacgaatcggac
gcaagtgacgatgaggagacgatggaggtagacggtaagactgctccatcggatattgcc
atgggaacggacaccaccagtggaagcaaagatgtcctatgtaaagaagcagccaccctt
gaagccaagaggcccggagctccttctaagcccagcgcactggccagcgggctgccgcag
agcaaagaggagctggagtctctgatcagtggcatccacaccactgttagtaacagtgtg
ctgcctcgcctgcacaagtgtctcactgcaaagataaagcgtgacgatgagcacaaggca
gtgaaatcgaaggatgtgaaggatgaggaggtggcgaggataccgatagccttcgccatg
atcaagctgatgcagtctctgccgatacacatcatggaggccaacctgcctgggatcctg
atcaaggtgtgtgtggtgctgaggaaccgcttccaggagatccgcgacgtggcgagggga
actctggtgaagatcatcgagactttaggctgcaagtacctgcagtatctgctcaaagag
atgcaggggctcctggccaagggctaccaggtccacgtgctaacattcacagtataccag
ctgctgtccgtcctcagtccaaccctgaagagcggggacctggacccatgcatgaatatg
ctcatcgatatcttcaacaacgagctgttcgggcctgtggccgaagagaaggaggtgaag
gggatcgtctccaagctgatggaggcccgacacagcaagagcatggactcctacgagctg
ctggctcggttttgcagcaaggagagcgtcaccaagttaattttgccacttaaggagttt
ctggagaattcctgcagcctgaaggtgtgcaaccgggtgagtgccgtgctgcggcggctg
gtcctgggtctgctcgtcaacgagggcatgacttctcatgatatcttactgctgtgccac
agcctggtcagccagagtctgccgctgctcaccaagagagaccgagagaaagcctcggct
aagcctcccccagacccccgactgcctcctcccagctgtctgctcctgcctccaactcca
aagagggggggtcagaaagctccagtcagcagccggaccaacatgcacatcctggtggac
gctggcctcaagctgctccacctgagtctgaagaaatctaaagtgacgtcgtctgaagcc
tcggcgctggagatgctggatcctttcgtgctgctgctgctcgactgcctcaactccatg
catgtcaaggtgatcacggaggctctggtggcgttcacttggctgttaaagttccctctg
ccagcagtggagcagaatgccgacgagctgactaagcacctctttgtcctgctgaaggat
tactccaaggccggagccgcccgcggggagaactacaacctggtccagaactgctttaag
gccatcaccatactggtaaagaatgtcaaaagcaaccagatctcagagacacagctgcag
gtgctgctgggatacgctgaggaggacatctacgaccagtctcgccaggccaccgccttc
ggcctgctgaaggcaatcctgtccaggaagctcattgtcccagagatggagcaggtgatg
aagaaagtggccaagctttctgtcaccggcagcaacgctatgatcagaatccactgtcga
cagatctatctgaaatacctgctggactacccactggggaagaagctgagagagcacctg
gactttgtggtggcccagctgccctacgagcacgacacaggcagggagtctgtgctggag
atgctggcctacatcttccagacttttcctcagaaactgctactgcagcacagcggcctg
ttctttgccccgctggccctggtcgtggtcaacgatgactcagcgcgctgtaagaagatg
gccgccatggccatcaagaccctgctgaccaaactggacttgaataaccagaacaccctg
ttctccctcgtcaccacttggctgaatgcagagaaggccagcctgcggcgtctcggggct
caggtttgcggtctgttcgtggaggtggaggaggagaggtttgcccgtcgcatggacgac
ttgctgcctctgctggagaaagagataaaccctgacaactacgaagatatcgaggaggag
caggaggagagaggcgcagacaggctgctgttcagttttctgactcttatcaccaaactg
agccaacactgcggcctgctggagctcagcaagcctcacgacacactcagtcgtatctgg
ggtcacatcgaagcccacctgcggtaccctcactgctgggtgtggctgaccgcctcgcag
ctttttggtcagctgtttgcagcccaccaggcggagcagctggtcgctctctggagaggt
gaggaaatggatgcttcccctctgtcaccagccacagccttcatcaccagcagactggac
aagaggatgagagagttggcgttatgtttctgccatcagctacagtccaagttcttagac
acggcgtcaggagagcaggtgatcaagaacctgctgtttgtcggcaaggtgatatacctt
gtttcccccgagtgtgacatcacacctcctcaggaagaagtgaaggagagggaggagcag
cagagggagaacgaggaggaagaggaggaggaagtagaagataaggatgatcggcctccc
tccctgctgtggttgatgaagaagctgtcgctgatggccaagagagaggcagcatacact
cccaaagttcccctgaagagaacgtgtgtatttaagttcctgggcgcgatggccatggac
ctggggaaggagcgactcggcccctatctggccactatcatcactcctctatacagggag
ctggacagcacctatgctgaccaagatcctaccctgaagaatctggcgcaggagctgata
gagctgctgaagagacacgtggggctggagagattctctctggccttctctgctgtccag
aaggagttttcacagaggcgagtgacacgtaaacgacacagagccatgcaggcggtggct
aacccagaaatcgcagccaagaagaaactcaagaagcacaagaacaaaatcgaagcaaag
aagaggaagatcgagttccttcggcccggatataaagccaagaagcaccggagccacgcg
ctcaaagacctggccatggtgcagtga
DBGET
integrated database retrieval system
