Etheostoma spectabile (orangethroat darter): 116672880
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Entry
116672880 CDS
T08457
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
esp04054
]
116672880
Pattern recognition receptors [BR:
esp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116672880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NLRC4_HD2
NACHT
FISNA
LRR_1
LRR_4
NOD2_WH
PRY
SPRY
LRR_8
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
116672880
NCBI-ProteinID:
XP_032360750
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Position
23:complement(22784688..23554448)
Genome browser
AA seq
1325 aa
AA seq
DB search
MEKRRKRQRQKDGVEQIDSQRQRIHQRPDSAGPEPSCVSVKSNWSNGRLLDFKGEQPSAR
KRIHQRPDSAGPEPSCVSVKSNWSNGRLLDFKGEQPSARKRVNQESSEGPSGQPAQQHQT
HLDSIFRLLEDDIVTFVNNELKKMQKLLRPDYPECSESQREGEDEEQRRTREAFLKITLH
FLRRMKQDELADCLQSRCPAGVCQRKLKSKLNKNFQRVFEGIAKAGNQTVLNQMFTEIYL
MKGGAAGVNEEHEVRQIETALRNPDRPETIIRCEDIFKTPPGRDEPIRTVMTTGVAGIGK
TVLTQKFTLDWAEGKANQDIQFTFPFTFRELNVLNERKFSLVELVDYFFSETKEAGICRF
EEFPVVFIFDGLDECRLPLDFLNTKILTDVTKSTSVGVLLTNLIRGNLLPSARLWITTRP
AAANQIPPGCVDMVTEVRGFTEPQKDEYFRKRFRDEEQASRIISHIKTSRSLHIMCHIPV
FCWITATVLEDVLKTREGGELPKTLTEMYIHFLVVQAKVKNIKYDGGAETDPHWSPESRK
MIESLGKLAFEQLQKGNLIFYESDLKECGIDIRAASVVSGVFTQIFKEESGLYQDKVFCF
VHLSVQEFLAALHVHLTFTNSGVNLLAEEQTSSTQFYQTAVDKALQSPNGHLDLFLRFLL
GLSLQTNLKLLRGLLTQTGSSSETNQETVEYIKEKMDKDLSAERSINLFHCLNELNDGSL
VEQIQVSLSSGRLSTDELSPAQWSALVFILLSSEEDLDVFDLKKYEASEEAFLRLLPVVK
ASNKALLSGCNLSERSCEALSSVLSSQSSSLRELDLSNNNLQDSGGKLISDGLKSPHCTL
KTLRLSGCNLSERSCEALSSVLSSQSTSLRELDLSNNNLQDSGGKLISDGLKSPHCTLET
LSLSGCLISEEGCSSLVSALNFNPSHLRELDLSYNHPGDSGVKLLSAGLEDPLWRLDSLR
LSGCDLSERSCEALSLVLSSQSSSLRELDLSNNDLQDSGVELMSPGLKSPHCRLETLRLS
GCNLSERSCEALSSVLSSQSSSLKELDLSNNNLQDSGGKLISDGLKSPHCTLETLSLSGC
LISKEGCSSLVSALSSNPSHLRELDLSYNHLGDSGVKLLSVGLKDPLWRLDTLRVEPAGV
RWLTPGLRKYSCELTVDTNTVNRKLKLSDNNRKVTRVKEDQPYPGHPERFESWSQLLCRD
GLTGRCYWEVETRGGVYISLSYRGIRRRGYSDDCVLGYNDQSWSLVCYNGRYFVCHNNRG
TSISVPRVSGRVAVYVDCPAGSLSFYTVSSDSLIHLHTFNTSFTQTLYPGFRIWSLGSSV
SLCPV
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagaaggaagaggcaaagacagaaggacggggtggaacagattgatagccaa
agacagaggatccatcagagaccagactctgctggacctgaaccaagctgtgtgtccgtc
aagagcaactggtcaaatggtcgcctccttgactttaaaggagagcaaccctctgctaga
aagaggatccatcagagaccagactctgctggacctgaacccagctgtgtgtccgtcaag
agcaactggtcaaatggtcgcctccttgactttaaaggagagcaaccctctgctagaaag
agagtgaaccaggagagttcagagggtcccagtggtcagcctgcccagcagcatcaaacc
cacctggactccatctttaggctcttggaggatgacattgtcacttttgtgaataacgag
ctgaagaagatgcagaagcttcttagaccagattacccagaatgctcagagagtcagagg
gagggtgaggatgaagagcagaggaggaccagagaggcgtttttgaagatcacactgcac
ttcctgcggagaatgaagcaggacgagttggctgactgtctgcagagcagatgtccagca
ggagtttgtcagcgtaaactcaaatctaagctaaacaagaacttccagcgtgtgtttgag
gggattgctaaagcaggaaaccaaaccgttctgaatcagatgttcacagagatctacctc
atgaagggaggggctgcaggggtcaatgaagaacatgaggtcagacagattgaaacagca
ttgaggaacccagacagaccagaaacaataatcagatgtgaagacatctttaaaacccca
cctggaagagatgaaccaatcagaaccgtgatgacaacgggagtggctggcatcggaaaa
acagtcttaacacagaagttcactctggactgggctgaaggcaaagccaaccaggacatc
cagttcacattcccattcaccttcagagagctgaatgtgctgaacgagagaaagttcagc
ttggtagaactggttgattacttctttagtgaaaccaaagaagcaggaatctgcaggttt
gaagagttcccggtggtcttcatctttgacggtctggatgagtgtcgacttcctctggac
ttcctcaacactaaaatcctgactgatgttacaaagtccacctcagtgggtgtgctgctg
acaaacctcatcagggggaatctgcttccctctgctcgcctctggataaccacacgacct
gcagcagccaatcagatccctcctgggtgtgttgacatggtgacagaggtcagagggttc
actgaaccccagaaggatgagtacttcaggaagagattcagagatgaggagcaggccagc
agaatcatctcccacatcaagacatcacgaagcctccacatcatgtgtcacatcccagtc
ttctgctggatcactgctacagttctggaggacgtgttgaagaccagagagggaggagag
ctgcccaagaccctgactgagatgtacatccacttcctggtggttcaggccaaagtgaag
aacatcaagtatgatggaggagctgagacagatccacactggagtccagagagcaggaag
atgatcgagtctctgggaaaactggcctttgagcagttgcagaaaggcaacctgatcttc
tatgaatcagacctgaaagagtgtggcattgatatcagagcagcctcagtggtctcagga
gtgttcacacagatctttaaagaggagagtggactgtaccaggacaaggtgttctgcttt
gtccatctgagtgttcaggagtttctggctgctcttcatgtccatctgaccttcaccaac
tctggagtcaacctgctggcagaagaacaaacatcatcaacacagttctaccagactgct
gtggacaaggccttacagagtcctaatggacacctggacttgttcctccgcttcctcctg
ggtctttctctgcagaccaatctgaaactcctgcgaggtctgctgacacagacaggaagt
agctcagaaaccaatcaggaaacagtggagtacatcaaggagaagatggataaggatctg
tctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatggttctcta
gtggagcagatccaagtgtccctgagttcaggacgtctctccacagatgagctgtctcct
gctcagtggtcagctctggtcttcatcttactgtcatcagaagaagatctagacgtgttt
gacttgaaaaaatacgaggcttcagaggaggcttttctgaggctgctgccagtggtcaaa
gcctccaacaaagctctgctgagtggctgtaatctgtcagagagaagctgtgaagctctg
tcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaac
ctgcaggattcaggagggaagctgatctctgatggactgaagagtccacactgcacactg
aagactctcaggctgagtggctgtaacctgtcagagagaagctgtgaagctctgtcctca
gtcctcagctcccagtccactagtctgagagaactggacctgagtaacaacaacctgcag
gattcaggagggaagctgatctctgatggactgaagagtccacactgcacactggagact
ctcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctg
aacttcaacccctcccatctgagagagctggacctgagctacaatcatccaggagactca
ggagtgaaattgctgtcagcgggactggaggatcctctctggagactggacagtctcaga
ctgagtggctgtgacctttcagagagaagctgtgaagctctgtccttagttctcagctcc
cagtcctctagtctgagagagctggacctgagtaacaacgacctgcaagattcaggagtg
gagctgatgtctcctggactaaagagtccacactgcagactggaaactctcaggttgagt
ggctgtaacctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcc
tctagtctgaaagagctggacctgagtaacaacaacctgcaggattcaggagggaagctg
atctctgatggactgaagagtccacactgcacactggagactctcagtctgtcaggttgt
ctgatctcaaaggaaggctgttcttctctggtctcagctctgagctccaacccctcccat
ctgagagagctggacctgagctacaatcacctaggagactcaggagtgaagctgctgtca
gtgggactcaaggatcctctctggagattggacactctcagggtggagcctgctggagtc
agatggttgacaccaggtctgaggaagtattcctgtgaactcacggttgacacaaacacg
gtgaacaggaaacttaaactgtctgacaacaacaggaaggtgacacgtgtgaaggaggat
cagccatatcctggtcatccagagaggtttgagtcctggtctcagctgctgtgtagagat
ggtctgactggtcgctgttactgggaggtcgagacgagaggaggggtttatatatcattg
agttacagaggaataaggaggagaggatacagtgatgactgtgtgttgggatataatgat
cagtcctggagtctggtctgctataacggtcgttactttgtctgtcacaataacagagga
acatccatctccgtcccccgtgtctctggaagagtagcagtgtatgtggactgtcctgct
ggctctctgtccttctacacagtctcctctgactcactgatccacctccacaccttcaac
acctcattcactcagactctctatcctgggtttaggatctggtctcttggatcctcagtg
tctctgtgtcctgtgtaa
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