Etheostoma spectabile (orangethroat darter): 116672883
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Entry
116672883 CDS
T08457
Symbol
caprin2
Name
(RefSeq) LOW QUALITY PROTEIN: caprin-2
KO
K18744
caprin-2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116672883 (caprin2)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116672883 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
116672883
NCBI-ProteinID:
XP_032360755
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All DBs
Position
23:complement(22032790..22056712)
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AA seq
937 aa
AA seq
DB search
MSSGSPESIHCARVKATRVALNMVQLSPSPTLDVTPPPERSEEGEERLEDLLMAESPNVG
SPGGLTALQLSLEACTPYHGYEAYIEDGLICLKHKVRNLEKKKLKLEDYKKRLNWGRKLN
KDQMAALEKYEVVLHNLAFARELHKTLDTLTQTLLRAQRKVVKKQQLVKEEAERERLSTV
LQIQHVLHSMQQENVRQDLLAGHNQAPLIPAQRLHRLGQLAALLGVNRDNRLSLEEQMEQ
AALAYLDLLQGKDKPVAGSTFKLFKXEVTRLLNCKYFSCLPPPPKKSPEMLLKSNSHNTT
SKSKPNEVPKEFFNRLYLSDPKTPPTPNWKGNFQTTREPPDSWDMEVSDVPTSPQAAVYK
PWRGAATFIPKGPVTTKKQYADCKQRKEKRVKGEQHVKLAVDMDMPVEVFNSPYALPKDP
VLRKQHLEDLMTKIHGSFSFMQDSHLDGEISPTNGHPRLKRRPSASPSSLGHTDLRSPVK
DLSEPMHSTPLPARLMERKATLANREQCLETCDRTFSSMDLPHEPLQLADMKFSSPPLYR
RESIISAGQEKSRPQTPVTESGKQSPCNGVASGTSTPPQGQSFSTPPTRQTLTSAQFQNI
QSMNASLPQNGDLSYKPDSAVFNEPRYSTASTQTPPEMAPSEDELQLVYQADQMVGNGGQ
IFLSPGQSSGSMGRPGQSYYTRGSVRGMARGGKGLAQTFRASGWHRGGSYVPQTHLRDAG
PVLYAARDSGYQHSYRRGGGRRNSSAAWSDSSQVSTPDREGAYTIVGHDSGHGDSLSVST
VDVPLTPHGHHHTLLPMQLYPLSQPMRVAFNASRTANFAPGNLDQPIVFDQLHSNLGEMY
DIHIGRFTCPVNGTYVFIFHILKLAINVPLYINLMRNEEVMVSAYANDGAPDHETASNHA
ILPLFQGDQVWLRLHRGAIYGSTWKYSTFSGFLLYQD
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcggctctccggagagtattcattgcgcacgagtcaaagctacaagagtggcg
ctcaacatggtgcagctgtctccttcacctaccctggatgtcacccctccacctgagcgc
tcggaggagggggaggaaagacttgaggaccttttgatggctgaaagccccaatgtgggc
tcgcccggtggtctgactgccctgcagctcagcctggaggcctgcacaccctaccacggt
tatgaggcctacatagaagatggtctcatctgcctcaaacacaaagtccgcaacttggag
aaaaagaagttgaaacttgaagactacaagaagaggctgaactggggcaggaaacttaac
aaggatcagatggctgctttggaaaagtacgaggtggtgctgcataacctggcatttgca
cgggagctgcacaaaactctggacaccttgactcagacgctgctgagagcccagaggaag
gtggtgaagaagcagcagctggtgaaggaagaggcggagagggagcgtctgagcaccgtg
ctacagatccagcacgtcctccacagcatgcagcaggagaatgttaggcaggacctgctg
gctgggcacaaccaggcacccctaatcccagcccaacggctgcaccgcctggggcagctt
gcagccctgcttggagtcaacagggataacaggctaagtttagaagagcagatggagcaa
gcggctctggcctacttggacctgctacagggcaaagacaagcctgtggctggatccaca
tttaagctcttcaaangagaagtcaccaggctgttgaactgcaagtatttcagttgtctt
ccacctccacccaagaagtctccagagatgctcctgaagtcaaacagccacaacaccaca
tcaaagtcaaaaccaaatgaagttcctaaggagtttttcaacagactgtacctgagcgac
cctaagactcctcccactccgaactggaagggaaacttccagaccacgagggagcctccc
gactcctgggacatggaggtctcagatgtacccacgtcaccccaagctgcagtctacaaa
ccatggagaggagctgctacttttatccccaaaggcccagtcactaccaagaagcaatat
gctgactgcaaacagaggaaagagaagagagtcaaaggagagcaacatgttaagttggca
gttgacatggatatgcctgtagaggttttcaactctccatatgccttgcccaaagaccct
gtcctgaggaagcagcaccttgaggacctcatgacaaagatccatggctccttcagtttt
atgcaggactctcatctggatggtgagatctcccccactaatggccaccccagactgaag
agacggccatctgcatctccatcttctctgggtcacacagacttgagaagcccagtaaaa
gacctttccgaaccaatgcactccacccccctgcctgccagactaatggagcgcaaagcc
accctggcaaacagggagcaatgcctggagacgtgtgacaggacgttttcctcgatggac
ctacctcatgagccgctgcagttggctgacatgaagttttcttcgccgccgctataccgc
agggagtcaatcatctcggctggtcaggagaagagccgtccacagacaccagtaactgag
tctgggaagcagtccccctgtaatggggtggcatctggcacctccaccccccctcaggga
caaagtttttctacaccccccaccaggcaaactctgacatctgcacagtttcagaacatc
cagtcaatgaatgcctctttacctcaaaatggagacttgagctacaaaccagattctgca
gttttcaatgagcccaggtacagcactgccagtacccaaacaccaccggagatggctccc
tcagaagacgaactacagcttgtgtaccaggcagatcaaatggttggtaacggtggacag
atcttcctgtcccctggccaatcaagtggaagcatgggtcgtcctggccagtcgtactac
accagaggatctgtgagaggtatggcacgtggtggcaagggactggcacaaacctttcgt
gcttctggttggcatcgaggaggatcctacgtcccacagactcatctaagggacgctgga
cctgtcctctatgctgctagagactctggatatcaacacagctacagacgtggaggagga
aggcgtaactcaagtgcagcctggagtgactcttcccaggtgagcaccccagacagggag
ggagcttatacaattgtgggtcatgactctggtcacggggattccctgtcggtttccacc
gtggatgtccctctcactccccacggccaccatcacaccctgcttcccatgcaactctac
ccgctctcccagccgatgcgagtggcctttaacgcttctcgcacggccaactttgctcca
ggcaaccttgaccagcccattgtgtttgaccagctgcacagcaacctaggggagatgtat
gacattcacatcggccgcttcacttgccccgtcaacggtacctatgttttcatcttccac
atcctgaagcttgccatcaacgtgcccctctacattaacctcatgcgcaacgaagaggtg
atggtgtcagcgtacgccaacgatggcgccccagatcatgagacggccagcaaccacgcc
atcctgccacttttccaaggagatcaggtgtggctccggttacatcgtggggccatctat
ggcagcacctggaagtacagcaccttctccggcttcctgttgtaccaggattga
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