Etheostoma spectabile (orangethroat darter): 116672963
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Entry
116672963 CDS
T08457
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116672963 (ctr9)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
116672963 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_7
TPR_11
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
116672963
NCBI-ProteinID:
XP_032360926
LinkDB
All DBs
Position
1:complement(7534863..7544021)
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AA seq
1165 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEADKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GFFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLHECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKSGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQMMKDKEDKRNKEVEEQKKLLEQRALYVEKTKNLLTFAEGSKEMAK
EKKKGGGRRKKGDIDEFVNDDSDEDLPMRKKKKRRGGSGSEQEEGEDGEKKSRKKRRKPA
RGGDDSNDEEGGSRPKKQRKPKERKKFEKPQPERLPPSLKGKIKSKAIISSSESSSDEDG
LKIAEDRQQRDSGSGSDGEDGPRKRIASDSESDGGRNHSGSEGGRNHSGSEAGSPRHSAG
SEDDSGSDRPVKKRRVQLQSDSEQSDAESKRSRSGSDDESRPGSPVAASDRGSDRGSEVG
SDNEGSPRRSDNGSEHEASNNDDSD
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctctatcgagatccctttacgggacacagatgaggttatcgagcttgac
tttgaccagctgccagaaggagacgaggtcatcagcatcctgaagcaggagcatacacag
ctgcacatatggattgctttggctttggagtactacaagcagggcaaaacggaggacttt
gtcaagcttttagaggcagctcgtatcgatggaaacctcgactacagagaccacgagaag
gatcagatgacctgtctggacacattggcggcttactatgtccagcaagcacgtaaagag
aaaaacaaagatgccaagaaagagctcatcacgcaggccacgctgctctacacaatggca
gacaagatcatcatgtatgatcagaaccatttgttgggacgagcctgtttctgcctgctg
gaaggagacaagatggaccaggctgacgctcagttccactttgtcctcaatcagtccacc
aacaacatcccggctttgctcggtaaggcctgcatctcctttaataaaaaggattacaga
ggagcactggcatactacaaaaaggctctgcgtacaaaccccggctgcccagctgaggta
aggctggggatgggccattgttttgtgaagctcagcaaactggagaaggctcgtttggcg
tttgggcgagccctggagcttaattcaaaatgtgtgggcgctcttgttggtttggcggtg
ttagagctcaatagcaaggaggcagattccatcaagaacggagtgcagctcctgtcacgg
gcctacaccatcgaccccagcaaccccatggtgctcaaccaccttgccaaccacttcttc
tttaaaaaggattacagtaaagtgcagcatctggccctccacgcttttcataacacagag
gtcgaggccatgcaggctgagagctgctaccagttagctcgctcgtttcacgtgcaggag
gactatgaccaagcatttcagtattactaccaggccactcagtttgcctcgtccaccttt
gtgttgcccttctttggcctggggcagatgtatgtgtatcgaagagacaaggagaatgcg
gcacagtgctttgaaaaggttttgaaggcctaccccaacaactacgaaacaatgaagatt
ctgggatctctctacgcaacatctgacgatcaggaaaagagagacatcgccaaaggtcat
ttgaagaaggtaacggagcagtacccagatgatgtggaggcgtggatcgagctcgctcag
atcctggagcagacggacattcagggagcattgtctgcatacggcacagccacacgcatc
ctgcaggagaaagtgcaggccgatgttccccctgagatcctcaacaacctgggggctcta
cacttcagactgggcaaccttggagaggccaagaaatactttcttgcctctctcgagcgg
gccaaagctgaaggcgagcatgacgagcattactacaacgccatttctgtcaccacctcc
tacaatctggcccgcctgtatgaggcaatgtgcgaattccacgaagctgataaactctac
aaaaacatcctgagagaacatcctaactacgtggactgttatttgcgtcttggagcaatg
gctcgcgacaaagggaatttctacgaagcttctgattggttcaaagaggccctgcagatt
aatcaggatcacccggatgcctggtcgctgattgggaaccttcacttggccaaacaggaa
tggggaccgggtcaaaagaagtttgagcgtattctgaagcagccatccacacagaacgac
acctactccatgctggctctgggtaacgtgtggctgcagactctgcaccagcccaccaga
gaccgggagaaggaaaagagacaccaggatcgagccctggccatatacaaacaagtcctg
cgaaatgatgccaagaacctttacgctgccaatggcatcggtgccgtcctggcccataag
ggctttttcagagaggcccgcgacgtgtttgcgcaggtgagggaggccacagcagacatc
agcgacgtctggcttaatctggctcacatctacgtggaacagaagcagtacatcagcgcc
gtgcagatgtatgaaaactgcctgaagaaattttacaaatatcagaacacggaggtgctg
ctgtatcttgcgagggcgctcttcaaatgcggtaaactccatgagtgcaagcagatgctg
ctgaaggcccgtcacgtggcgcccagcgatacggtgctgatgttcaatgtggccctggtg
cttcagagactggccactcttgtgctgaaagatgagaagagcaacttgaaggccgtgctt
agcgctgtcaaagagcttgaactggctcacaggtatttcagctacctcagcaagtctgga
gacaagatgaggtttgacctcgctctcgccgcttctgaggccaggcagtgctctgacctg
ctgagtcaggctcagtaccatgtggcgagagccagaaagcaggatgaggaggagaaggag
cttcgtgccaaacaagaacaagagagggacctgctgcgtcagcagatgatgaaagacaag
gaggataagcggaacaaagaggtggaggaacagaagaagctcctggagcagagagccttg
tacgtggagaagaccaagaacctgctcaccttcgcagagggatcaaaggaaatggccaaa
gaaaagaagaagggcggtgggcgtcgcaagaaaggcgacattgacgagtttgtcaacgac
gactctgatgaggacctgccaatgaggaagaagaagaagaggaggggcggcagcggcagc
gagcaagaggagggcgaggacggagagaagaagtcacgcaagaagaggaggaagcccgct
agaggaggagatgacagcaatgacgaggaaggagggtcacggcccaagaagcagcgtaaa
cccaaagaacgcaagaagtttgaaaagccccagcctgagcgtttgccaccgtctctcaaa
ggaaagatcaagtccaaggctatcatctcctcttcagagtcgtcttcagatgaggatggc
ctgaaaatagccgaagacagacaacaaagagacagtggttcaggatctgatggggaggac
ggccccaggaagcgtattgcatctgacagtgagtcagatggaggtaggaaccactctggc
agcgagggaggtaggaaccactctggcagcgaggcgggcagccctcggcattctgcgggc
tccgaggatgactctggcagcgaccgtccagtgaagaagaggagggtgcagctgcagtcc
gattcagagcagtcggacgccgagagcaagaggagtcggtcagggtccgacgacgagtcc
cggcccggttcgcctgtcgctgcgtccgaccgaggatcagacaggggatctgaagtgggc
tcagacaacgagggctccccgcgccgctctgataacggctctgaacatgaagcgtccaac
aatgatgacagcgattaa
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