Etheostoma spectabile (orangethroat darter): 116673070
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Entry
116673070 CDS
T08457
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116673070 (prdm4)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116673070 (prdm4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf_PR_Knuckle
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
NOA36
TFIIA
zf-C2HE
SOG2
DUF5810
Motif
Other DBs
NCBI-GeneID:
116673070
NCBI-ProteinID:
XP_032361053
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Position
23:7166928..7173634
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AA seq
875 aa
AA seq
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MNDMNLSPVGMDQLSVPSVSASHLGLPTSPTHNPIPTPGMPVAIPSLGPSLGSLPSALSL
MLPMGPLSDRVMCGLPERNYSLPPPPYPHLESSYFRHILPGILSYLADRPPPQYIHPSSL
NMDGTLSVASNNPSGLDPYSGPGGPLEQGLVPMDSRQVSGQGDLHQTGAHELDSTGLAME
SRVSSPMSPDRMGEELATMDGVRVVAVSDTQQQLGGGRQPQPHESLTGVDSSGGVMPLHG
PPVLELPVVMEPDHMGGRVGNAGGGGAGGLGEQLHPNGELNSGVVSVALTGSMASQGQLE
SVSLHGHSGMGLEAVNVSPITAEVSLGPENSLVLVNSTLQLEDSTSNKENMVTAYTIWCT
LCERSYTSDCPEHGPVTFIPDAPIQSRARLSLPRPLCLRISVADEPLGVFPRDVIPPRTC
FGPMVGQHCSNVDLSDWPEKDTPQIWKMYHNNVLEFYIVTTDENECNWMMFVRKARTREE
QNLVAYPANGKLFFCTTTEIHPDQELLFYYSRDYCRLIGVPQVPEGQICQCGKECSSFSE
LKSHLGSHNSSHSHNQPPHSHSPSQQDHSQQQQQPQQQQQEQQPQQHTHQEEKLTNGNSS
SSSSPWLCHTHAAGQTNSDNNSSRSSSNRNSNNAISRAKGQSHVREKKFKCSMCSRAFIT
STKLNVHFMGHVGMKPHKCEYCSKAFSDPSNLRMHLKIHTGQKNYRCTVCEKSFTQKSHV
ASHMLIHTGAEKHKCDLCDRAFIRKHDLKQHMFSHTHERRIQCPKCNKHFLKTNHLKMHM
NSHEGRRDFVCEKCNKAFLTKYHLTRHLKICKGPKTERVSRKEPELDDEEEDEEEEEEDD
GRGRGAERLVDSANNEGCGLDVGGYNSEKSLSPSH
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatgaacctgagtcctgtgggcatggaccagctcagcgtgccctcagtgagt
gccagccacctgggtctgcccacctcccccacacacaaccccattcccactccaggcatg
ccagtggctatccccagcctgggtccttccctgggctcccttccttctgccctctccctg
atgctccccatgggtcctctgagtgacagagtgatgtgcggcctgccagagaggaactac
tctttgccgccgcctccatacccccacctggagagcagctacttccgacacatactgcca
ggtatcctgtcctatctggcggaccgtccaccacctcaatacattcatcccagcagcctt
aacatggatgggaccctgtctgtggccagcaacaatccttcaggtctggatccctacagt
ggccctggtggcccactggagcagggcctggtgcccatggactccagacaggtcagtggg
cagggagacctccaccagactggtgctcatgagctggactctacaggattggctatggag
tcacgtgtcagcagccccatgtcccctgaccggatgggagaagagctggccactatggac
ggagtcagggtggtggcggtgtctgacacccagcagcagctcggcgggggaaggcagcct
cagccacatgagagcttgaccggagtggactcatccggtggggttatgcccctccatggt
ccccctgttcttgaacttccggtggtgatggagccagatcatatggggggcagagtgggg
aacgctgggggaggaggagcaggaggacttggtgaacagctccacccaaatggggagctg
aactccggagtcgtcagtgtggcgctcaccggctccatggccagccagggccaactggag
tcagtgtcactccatggacactctggaatggggctggaggcagtgaatgtgtctcccatc
actgcagaggtgtctctggggccggaaaacagcctggtgctggtcaactccaccctgcag
ctagaggattctacctccaacaaggagaacatggtcactgcctacaccatatggtgcaca
ctgtgtgagcgctcgtatacctcagactgcccagagcatggcccagtcaccttcatccct
gacgcgcctatccaaagccgggctcgtctctctctgccgcgtcccctgtgcctgcgcatc
tcagtggctgacgaacctcttggagtttttccacgggacgtcattcctccaaggacctgc
tttggaccaatggtgggccagcactgtagcaacgtggatctttctgattggccagaaaag
gacacaccacaaatatggaagatgtaccacaacaatgtgctggagttctacattgtgaca
acggatgagaacgagtgcaactggatgatgtttgtccgcaaagcaaggacccgtgaggaa
cagaacctggtggcgtaccctgccaacggtaaactgttcttttgtacaaccacagagatc
cacccggaccaggagttgctcttctactatagcagagactattgtaggctgataggtgtt
cctcaggtgcctgagggtcagatctgccagtgtggcaaagaatgctcctccttctctgag
ctcaagtctcaccttggcagccataacagtagccacagccataaccaacctccacacagc
cacagtccatcgcagcaggaccactctcagcaacagcaacaaccacagcagcagcaacaa
gagcaacaaccacagcaacacactcaccaggaagagaaactgaccaatgggaactcaagc
tcctcctcttccccatggctctgccacactcacgctgcaggacaaacaaatagtgataac
aacagcagcagaagcagcagtaacagaaactctaataatgctatctcaagagcaaaaggt
cagagccatgtgcgagagaagaaattcaagtgcagcatgtgttcccgggcttttatcaca
tccactaagctcaatgtgcacttcatggggcacgtggggatgaaacctcacaagtgtgaa
tactgtagtaaagccttcagcgatcccagcaacctcaggatgcacctcaagattcacaca
ggtcagaagaactacagatgcacagtttgcgagaagtcgtttacccagaaatcccatgtg
gcgtcgcatatgctcatccacacaggtgcagagaagcacaagtgtgacctctgtgaccgg
gcattcatcaggaaacacgatttgaaacaacacatgttctctcacacacatgagcgtcgg
atacagtgcccaaagtgcaacaagcatttcctcaagaccaaccacctgaaaatgcacatg
aactctcacgagggccgaagagactttgtctgtgagaaatgcaacaaagcattcctgacc
aaataccacctcacccgtcaccttaaaatatgcaaaggacccaagacggaaagagtgtcc
cgtaaggagccggaattggatgatgaggaagaagatgaagaagaagaagaggaggatgat
ggtaggggaagaggagcagaaagactcgttgactcagctaacaatgaaggctgtggttta
gatgttggaggatataattctgaaaagtccctgtcaccctctcattga
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