Etheostoma spectabile (orangethroat darter): 116673115
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Entry
116673115 CDS
T08457
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116673115
Spliceosome [BR:
esp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116673115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
116673115
NCBI-ProteinID:
XP_032361135
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Position
23:18861814..19095832
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AA seq
635 aa
AA seq
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MRTRECVRLATLAFEGGPSRLLLHLSPSVSAARRSLGESDPLLYLPGRARSGGGAHTHTH
TRGETVLTHIHTQPGQAGNMTSSYNLEFLPDMMVESRLLVPGDRINGTAGKMNGALEHSD
QPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTR
KAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFS
AFGQIEECRILRGPDGLSRGVCRSDSLPSTRCAFVTFSTRAMAQNAIKAMHQSQTMEGCS
SPIVVKFADTQKDKEQRRLQQQLAQQMQQLNSATTWGSLTGLGGLTPQYLAVRRAATSPT
ITSSTPYYSPMANAAALLQQATSSSNLGAFSGIQQMAGMSALQLQNLATLAAAAAAAQNS
ASPNTANPLSTNAASLGALASPAAGTTASSNASAMNSLTSLGTLQGLAGATVGLNNINAL
AGSVNSMAALNGGLGGAGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQGAA
GSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDN
PVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcggacaagagagtgtgtgcggctggctacacttgcctttgagggaggcccttctcgg
ctcttattgcacctgtccccctccgtctccgcggccaggcgcagtttgggcgagagcgat
ccgctcctttatctaccaggcagggcgcgcagcggcggaggcgcacacacacacacacac
acgcgtggcgaaactgtactcacacacatccatacacagccagggcaggcaggcaacatg
acttcatcctacaatctggaatttctgcccgatatgatggtggagagccgcctgcttgtt
cccggagacagaattaacggcacggccgggaagatgaacggggcgctggagcattcagac
cagccagacccggacgccatcaagatgtttgtgggccagatcccgcgctcctggtcagag
aaggagctgaaggagctgtttgagccgtacggagccgtctaccagatcaacatactccga
gaccgcagccagaaccctccacagagcaaaggctgctgttttgtcacgttttacacaagg
aaagctgccctcgaagcccagaatgcactgcataacataaagaccttaacagggatgcac
caccctattcagatgaaacctgcagatagtgagaaatctaacgcggtggaagacaggaag
ttgttcatcggcatggtgtcgaagaagtgcaacgagaacgacatccgggttatgttctct
gcgtttggccagatcgaggagtgccgaatcctcagggggcctgacggactgagcagaggt
gtgtgtcgctccgactcacttccatccacacgatgtgcgtttgtcacgttttccaccaga
gctatggcacagaatgcaatcaaagccatgcaccagtctcagactatggagggctgctcc
tcccccatcgtggtgaagtttgccgacacgcagaaggacaaggagcagcggcgtctgcag
cagcagctggcgcagcagatgcagcagctcaacagcgccaccacctgggggagcctgacg
ggcctgggcggcctcaccccgcagtatctggctgtaaggagagccgccacgtcacccacc
atcacctcctccaccccttactacagccccatggccaacgccgccgcattgctccagcag
gcgacctcctccagtaacctaggagccttcagcgggatccagcagatggccggtatgagt
gctctgcagttgcagaacctggccactttagcagcggcggcggcggcggcccaaaactca
gccagtcccaacaccgctaaccccctgtccaccaacgctgcctccctgggagcattggcc
agcccagcggcgggcacaacagccagctccaacgccagcgccatgaactctctgacctct
ctgggcaccctgcagggcctggcgggcgcgaccgtgggcctgaacaacattaatgcacta
gcaggtagcgtcaacagtatggcggctctcaacggaggactgggcggcgcagggctcacc
aacgggacggcaggcaccatggacgcgctgacgcaggcttactcagggatccagcagtat
gccgccgcggcgctgcccaccctctacagccagtccctgctgcagcagcaaggggccgcc
ggcagccagaaagagggtcccgagggtgccaacctgttcatctaccacctgccccaggag
ttcggagaccaggacatactgcagatgttcatgcctttcggaaacgtggtctctgccaaa
gtcttcatcgacaaacagacaaaccttagcaagtgcttcggcttcgtcagctatgacaat
cccgtgtcggcacaggcggccatccaggccatgaacggctttcagatcggcatgaagcgg
ctgaaggtgcagctgaagcgctccaagaacgacagcaaaccgtactga
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