Etheostoma spectabile (orangethroat darter): 116673333
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Entry
116673333 CDS
T08457
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116673333
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116673333
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
CdiA_C_tRNase
Motif
Other DBs
NCBI-GeneID:
116673333
NCBI-ProteinID:
XP_032361495
LinkDB
All DBs
Position
23:complement(17649516..17686064)
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AA seq
1780 aa
AA seq
DB search
MSLIIHFVTALALWGPVGALLPEFGDVCTKGSCYPATGDLLIGRAHRLSASSTCGLQQPE
RYCIVGHLEDEKKCFVCDSRKPFNENTNQDSHTIENLVTTFAHNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFRTFRPAAMLIERSMDFGKTWQVYRYFAYDCESSFPGVPSRPM
ARVDEIVCDSHYSDIEPSTEGEVIFRVLDPVFQIEDPYSLRIQNMLKITNLRVKFTKLHT
LGDNLLDSRDDVIEKYYYSLYDMVVRGNCFCYGHASECAPMDGATFDAEGMVHGRCACNH
NTEGLNCERCQDFYHDMPWRPAEGQNTHACKKCECNHHSTSCHFDLAVYMTTGNISGGVC
DDCQHNTVGRQCEQCAPFYFQHPNRDLRDPNVCEPCNCDPSGSLQGGLCDSHNDVASGMI
SGQCRCKANVEGERCDHCRQGHYGLGQGPHGCLSCTCNPLGTLPGGNPCDSDTGRCFCKR
LVDGHNCDQCLPQHWGLSNDMDGCKSCDCDQGGAENNNCDPHTGQCVCREHMFGRRCDQV
ESGFYFIALDHYTYEAEDAKHGPGVTVVPRPYPLDRSPTWTGMGFVNMPEGAYLEFTINN
IPESMDYDILIRYEPQLPDQWEQVNIRVQRPVYNPPNYTSHCGNSIQGGDEQSISLPPGS
RHVLLVRPVCFEQGLNYTVRLTLPLYSSVSDVQSPYTLVDSLVLIPRVRELDMFHGVDGD
GAWDTFQRYRCLETSQSVVKSPLTDICNNYIFSVSALLHKGAMACQCDPQGSLSSVCEPS
GGQCRCRSNVVGRNCDHCAPATFLFSPNGCRSCECDARGSIDAFCHEATGQCECVPGATG
RQCSHCLPGFWGFPQCRACQCNGHSEYCHPQTGECQGCRDFTTGHHCERCLDGYHGNPVL
GSGGNCRPCMCPDGPRSGRQFSDSCYLMANSNQLVCVCSPGYKGARCDECAPGYFGNPLV
PGGRCMPCQCSSNIDMHDPGSCDARTGACLKCLYHTEGYGCQHCKQGYYGNAGTQSCRKC
MCYSAGTSPQACSSPDECQCNQLSGQCPCQPNVVGQKCDRCAVDTWNIASGTGCQRCDCH
PVHSSGSSCDEVTGQCLCKPGFGGKTCRECRELFWGDPEVKCHACDCDSRGISSNQCHRA
TGQCTCVKGVSGRRCDECARGYTGEFPTCKPCHQCFAVWDTVVGELTNQTQRLEAQVTQL
QTSGVTAPYKDLVASLERNAKAVREIVENNPAAVKLERTQDLMHQITGVMSYLNGKLNTT
EETLNVLHDDANTTDANLDALTAEANQLELSVQDLRQQVHKAKNANIQGAMDTIAAAHVQ
STTAELRANTSTSNPGNTVEVSATVRRATEDKLTSAQKEFDRKHQRNTQKLDKLSTELDK
FDLSPLSKKTCGGAAEGDGCPCSPCGGLGCVGEDGALHCGGEGCGGLVTTSQTALKSAKD
LDQEILTAMQEVDKLSRMVWEANSRANEAKVNAMDVLIKSNRSKQRVEQSNEQLRNLIKE
IRDLLTNEKADVSVIEAVANEVLALEMPTSTEKLKELTEEIREKVGTLTSVETILSQSAD
DIQAAETLLKQAKAASEEASNMKETADVVKAALVETERAQSIAMDAIQLAQNNTKGTLEL
LISVESETAMSELKLGNTTGRLLQLEMEVGLLRQNNLEVDRLAKAADWTTDQARLNAEEA
QQEFDTEVKDKMAEVEDLVEDKGESVLQARRRADMLQQEAKELLAQSSVKLQELGVLESS
YEANQIILEEKAAELAELEQTARRLLEEISYKVTLYSTCL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcataatccactttgtaacagctttggccctttgggggcccgtcggggccctg
ctgccggagttcggggatgtttgcaccaaagggagctgctaccccgccacaggtgacctg
ctgatcggccgcgcgcacaggctcagcgcctcctccacctgcggactccagcagccggag
cgctactgcatcgtcggacatctggaggacgagaagaaatgttttgtgtgcgactccagg
aagccgttcaacgagaacaccaaccaagacagccacaccatcgagaacctggtcaccacc
ttcgcccacaaccgcctcaagacctggtggcagtcggagaacggtgtggagaatgtgacc
atccagctggacctggaggccgagttccacttcacacaccttattatgaccttcaggacg
tttcggccagctgccatgttgatcgagcggtccatggactttgggaaaacatggcaggtt
tatcgttactttgcctacgactgcgagtcatccttccccggcgtgccctccaggccaatg
gccagagtggacgagatagtctgcgactcccattactcagacatcgaaccctccacagag
ggagaagttatatttcgggtgctggaccccgtctttcagattgaggacccctacagcctg
aggatacagaacatgctgaagatcactaatctccgggtgaagttcaccaagctccacaca
ttgggcgacaacctgctcgactcccgcgacgatgtgatagagaagtactactactccctc
tatgacatggtcgtccgtggcaactgcttctgctacggtcatgcctcggagtgcgccccc
atggatggagcaacgtttgatgctgagggcatggtccatggccgctgtgcatgcaaccac
aacacagagggattaaactgtgagcgctgtcaggacttctaccatgatatgccttggaga
cctgcagaggggcaaaacacccacgcctgcaagaagtgcgagtgtaaccatcactccaca
tcgtgtcacttcgacctggccgtgtacatgacgaccggcaacattagcggaggcgtgtgc
gacgactgtcagcacaacacggtgggccgacagtgcgagcagtgtgcacccttctacttc
cagcacccaaaccgagacctcagggaccccaacgtctgtgagccgtgtaactgtgacccc
tccgggtctctgcagggcggactgtgtgactcgcacaacgatgtggccagcgggatgatc
tcaggccagtgtcggtgcaaagccaatgtggagggcgaacgctgcgaccactgcagacag
ggacactacggactgggacaggggcctcacggctgcctctcgtgtacctgtaacccgctg
ggaactctgcctggaggaaacccctgtgattcagacacagggaggtgcttctgcaaacgc
ctcgtcgacggacataactgcgatcagtgtctgccgcagcactggggtctgtccaatgac
atggacggctgcaaatcatgtgactgcgaccagggtggggctgaaaacaataactgtgat
cctcacacaggacagtgtgtgtgcagggagcacatgtttggacgacgctgcgatcaagtc
gagtctggcttctacttcatcgctctggatcactacacctacgaggcagaggacgccaag
catggacctggtgtgacggtggtaccgaggccttaccctctggatcgcagtccgacatgg
accggtatgggttttgttaatatgccagaaggagcttacttagagttcaccattaacaac
atcccagagtccatggactatgacatccttattcgctatgagccccagctgccagaccag
tgggagcaggtgaacatccgagtgcagcgccccgtctataaccctccaaactacacctct
cactgcggcaactccatccagggcggagacgagcagtccatctctcttccacctggatcc
agacacgtgttgctggtgaggccggtgtgtttcgagcaaggactgaactacaccgttcgt
ctcactctgcctctctactcgtcagtcagtgacgtccagagcccgtacacactcgtcgac
tccttggtgctgataccccgggtcagggagctggacatgttccatggggtcgatggtgat
ggagcgtgggatacgtttcagcgctaccggtgtctggagaccagccagagcgttgtcaaa
agccccttgaccgacatctgtaacaactacatcttcagcgtctctgctctgctccacaaa
ggagccatggcatgccagtgtgaccctcagggttcactaagttctgtgtgtgagcccagt
ggaggtcagtgccggtgtcgatccaacgtggtcggcaggaactgcgaccactgtgccccg
gcgacatttctcttcagccccaacggctgcaggtcttgcgagtgtgacgctcggggttcg
atcgacgccttctgccacgaggcgacgggccagtgtgagtgtgtccctggggccacaggg
cgccagtgttcccactgcctgcccggcttctggggcttccctcagtgtagggcgtgccag
tgtaacggccacagcgagtactgccaccctcagaccggagagtgtcaaggctgcagagac
tttaccactggacaccactgtgagaggtgtttggacggttaccatggcaacccagtgttg
ggttcaggtggcaactgtcgcccctgtatgtgccctgatggaccccgcagtggacgccag
ttttctgacagctgttaccttatggctaatagtaaccagctggtgtgtgtgtgcagccct
ggctacaaaggtgccaggtgtgatgagtgtgctcccggttacttcgggaaccctctggtg
cccggtgggcgctgcatgccctgccagtgcagcagcaacatcgacatgcacgacccgggg
tcctgtgacgctcggacaggcgcctgtctcaaatgcctgtaccacactgagggctacggg
tgtcaacactgcaaacagggttactacggcaacgctggcactcagagctgcaggaagtgt
atgtgttactcagcgggcacatcccctcaggcctgttcctcccctgatgagtgtcagtgt
aatcagctcagcggccagtgtccctgccagccgaacgtggtcggtcagaaatgcgaccgc
tgtgccgttgatacgtggaacatcgccagcgggacgggctgccagcgctgcgactgccac
cccgtccactcttctggatcctcctgcgatgaggtcacaggacagtgcttgtgcaaaccc
ggttttggtggcaagacctgtcgggagtgcagagagctcttctggggggatccagaggtc
aaatgtcatgcttgtgactgcgattctcggggaatctccagcaaccagtgccatcgcgcg
acaggtcagtgcacctgtgtgaagggcgtgtcgggccgacgctgtgacgagtgcgccaga
ggctacacgggtgagttccccacctgtaaaccctgccaccagtgctttgctgtgtgggac
accgtggtgggcgagctgaccaatcaaacccaacgtctggaggcccaagtaacacagctg
cagaccagcggggtgacagcgccgtataaagacctggtcgccagcttggagaggaacgcc
aaagctgtcagagaaatagtagaaaacaaccctgctgcagtgaagctggagaggactcag
gacctgatgcatcagattaccggtgtgatgtcctacctaaacggaaagctgaacacgaca
gaggagaccttgaacgttctccacgatgacgccaacaccaccgatgcaaacttggacgct
ctgactgccgaggccaaccagctggagctgagtgtccaggacctgagacagcaggttcac
aaagcaaagaacgccaacatccagggtgccatggacactattgcagcggcacacgtgcag
tctacgacggcagagctccgcgccaacacctccaccagtaatcccggaaacacggtggag
gtgtcggccacagtacggagagccacggaggacaaactgaccagcgctcagaaggaattt
gaccgcaagcaccaaagaaacacacagaagctggacaaactgtccactgagctggataaa
tttgacctgtcaccactcagcaagaagacatgtgggggtgcggctgaaggggacggctgc
ccttgctccccctgcggtggtttgggttgtgtcggcgaggacggagctcttcactgtggc
ggagaaggatgcggaggcctcgtcacaacctcccaaactgctctcaaatcagccaaagac
ctggaccaggagatcctcacagcgatgcaggaggtggacaagctctccaggatggtgtgg
gaagccaacagccgcgcaaacgaagccaaggtgaacgccatggacgtgctgatcaaatcc
aaccggagcaaacagagagtggagcagagcaacgagcagctccgcaacctcatcaaagag
atacgagacctgctcaccaatgagaaggcagatgtttcagtgatcgaggctgtggccaac
gaggtgttggctctggagatgccgacctcgacagaaaagctgaaggagctgacggaggag
atcagggagaaggtgggcactctgaccagcgtggagaccatactcagtcagagcgctgac
gacatccaggctgcagagacgctcctgaaacaggccaaggctgccagtgaagaggcgtct
aacatgaaggagacagcagatgtggtgaaggcagccctggttgagactgagcgtgctcag
agtatcgccatggacgccatccaactggcccagaacaacacaaagggaactctggaactg
ctgatctctgtggagtcggagacggcgatgtcggagctgaagctcggtaacaccacaggt
cgtctgcttcagctggaaatggaggtcggcctcctgagacagaacaacttggaggtggac
cgcctggcgaaggcggccgattggaccaccgaccaggccagactgaacgcagaggaggcc
cagcaggagtttgacaccgaggtgaaagataaaatggctgaggtggaggacctggtggag
gataaaggggaatcggtgctgcaggcgaggagaagagcagacatgctgcagcaggaggcc
aaagagctgctggcccagagcagcgtcaagctgcaggaactcggagtgttggagagttcc
tacgaggccaaccagatcatcttggaggaaaaagctgccgagctggccgagttggagcag
accgcccgtaggctcctagaggaaatcagctacaaagtgacgctgtacagcacctgtctg
tga
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