Etheostoma spectabile (orangethroat darter): 116673348
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Entry
116673348 CDS
T08457
Symbol
parpbp
Name
(RefSeq) PCNA-interacting partner
KO
K27412
PCNA-interacting partner
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esp03400
]
116673348 (parpbp)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116673348 (parpbp)
TLS (translesion DNA synthesis) factors
Other TLS factors
116673348 (parpbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
FAM161A_B
Motif
Other DBs
NCBI-GeneID:
116673348
NCBI-ProteinID:
XP_032361530
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Position
23:complement(17265254..17280042)
Genome browser
AA seq
587 aa
AA seq
DB search
MEAVGDRLKVMVKVFRRECHRVFHSERTTIHGADGMLMLLQLVMADVNKQHGGEFKVALS
DVLMAWKHLLFDKLHLPPPNIARLENYDLILETYESFLKRSNTVDLVDILSVYKQLSLVD
SDPQEPVSPIQLFEFLSGNMDVSELPSSVPSTPSSKSRPCNSQVKIAVRRVFCSYLNLLV
NAKNDMALALTIDVPSRALGRQAFTAIKHAARNNNTSLFLAVTSFVRAIQLGGKGYAPAE
SDPLRKHVKGLSDFVQFLDNLEEILGEIPDPSVCGARLVAAIRAVLVKGRSSGDAVFAAA
EETTKELKERICQLHQIQKGIANGSGTGISPARPKAYAVNHCTAYGGRDTVKVLMALLDE
EALTPPCQNKADLLSEDQPTLSGAEGTCILNMFRSPEVSTGCSPEPLKNRVQSRLDLLKP
KPRDKVIRSQFACTYKDEELPLNRVLEFPSTSQVPTCVHPAPKRPTIPAVDEECSSDVEE
TTKAKSTSECPNKEQNGVQRGPALEPRSGNVQNRGAGPGNRKKTGTQIQRKGNKRKQVDS
DQHGGSENEPPQKKLVLVQTQGKNVSKASSKKKLIAGQGKLTSFFRL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtaggggatcgtctgaaggtgatggttaaagtctttaggagagagtgccac
agggttttccactctgagaggaccaccattcacggagctgatggcatgctgatgttgctg
cagctggtcatggcagatgttaataagcagcacggcggagagttcaaagtggctctgagt
gatgtcctgatggcctggaaacacttactgtttgacaaacttcacctgccaccccccaac
attgcacgcctcgagaactatgatctcatcctggagacatacgaatctttcctgaaacgc
tccaacactgtggacctggttgatatcctctccgtgtacaaacagctgagcctagtggac
tcagacccacaagagcctgtgagcccgatccagctgtttgagtttttatcaggtaacatg
gatgtctcagagttaccgtcttcggtcccatcaacaccatctagtaaaagcaggccctgc
aactcacaggtaaaaatagcagtgagaagggttttctgctcctatctgaatttgctcgtg
aatgccaagaacgacatggcgctggcgctaaccattgacgtccctagccgcgctcttgga
cgtcaggcatttaccgccataaagcacgctgcacgtaacaacaacacttctctcttcttg
gctgtgacatcttttgtgagggccatccagctcggagggaagggctacgctccagctgag
tctgacccactgaggaagcatgtcaaaggcctgtctgactttgttcagtttctagacaac
ctggaagaaatactgggagagattcccgacccaagtgtgtgtggagccaggctggtggcc
gccatcagggcagtgctggtgaagggacgcagcagcggagatgcagtgttcgctgcagct
gaggagacgacaaaggagctgaaggagaggatctgccagctacaccagatccagaaaggg
attgctaatggaagcgggacggggataagccctgccaggccaaaggcttacgcggtcaat
cactgcactgcatacggaggtcgggacacagtgaaggtgctgatggctctgctggatgaa
gaagcgctgactcctccgtgtcagaacaaggcagacctgctgtctgaggaccagcccacc
ctcagtggagcagaggggacctgcatcctcaacatgttcagatcccctgaagtgtctact
ggatgctctccagaacctctaaagaaccgagtccagagccgcctagacctgctcaaaccc
aagcccagagacaaagtcattcgatcccagtttgcgtgcacatacaaagatgaagaactg
ccactcaaccgtgtgctggagttccccagcaccagccaggtccctacctgtgtgcaccca
gcacccaaacgcccaacaatcccagctgtggatgaggagtgcagctctgatgtggaggag
acaaccaaagccaagtctacgtctgaatgcccgaataaggagcagaacggcgtgcagcgg
gggcccgctcttgaaccaagaagtggaaatgtgcaaaacagaggtgcaggcccgggcaat
aggaagaaaaccggcactcagatccagagaaagggcaacaagaggaaacaggtggattcg
gaccaacatggtggttcagagaacgagcctccacagaagaaacttgtcttggtccaaacg
cagggcaagaatgtcagtaaggcctcgagtaagaagaagctgatagctgggcagggaaag
ctaaccagcttcttcagactctaa
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