Etheostoma spectabile (orangethroat darter): 116673426
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Entry
116673426 CDS
T08457
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116673426 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esp03400
]
116673426 (apex1)
Enzymes [BR:
esp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
116673426 (apex1)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
116673426 (apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
116673426
NCBI-ProteinID:
XP_032361659
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All DBs
Position
23:2367628..2373089
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AA seq
310 aa
AA seq
DB search
MKRGKKEEDAAADGDNDTGSASAKKTKKAKEPEAPIMYEDPPDKMTSKDGREANMKITSW
NVDGLRAWVKKKGLDWVREEAPDVMCLQETKCAEKSLPADITSMPEYPHKYWSASDEKEG
YSGVAMLCKTEPLKVTYGIGNEEHDKEGRVITAEFPNFFLVTAYVPNSGRGLVRLDYRKT
WDVDFRAYLSELDMQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPEEREGFGQLLESG
FIDSFRELYPEQANAYTFWTYMMNSRGKNVGWRLDYFVLSSSLLPGLCDSKIRNKALGSD
HCPITLHIAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggcaagaaggaagaagatgcagctgcagacggagacaatgacacaggctct
gcatctgcaaagaaaacaaagaaggccaaggaaccagaggccccaataatgtacgaagat
ccacctgacaaaatgaccagcaaagatggacgtgaagccaacatgaagatcacctcctgg
aacgtcgacggcctgagggcctgggtgaaaaagaagggcctggattgggtgcgtgaggag
gctccagatgttatgtgcctgcaggagacaaagtgtgcagagaaatccctccctgctgac
atcacctcaatgccagagtaccctcacaagtactggtccgcgtcagatgaaaaggagggt
tacagtggtgtggcaatgctctgcaagactgaacccctaaaagtcacctatggcattggt
aacgaagagcatgacaaggaggggcgcgtcatcaccgccgagttccctaacttcttcctg
gtgacggcctatgtgccaaactccggcagaggccttgtgcgccttgactaccgcaaaacc
tgggacgtggacttccgggcgtatctgagcgagctggacatgcagaagcccctggttctg
tgcggcgaccttaacgttgcacaccaggagatcgatctgaagaacccaaaggggaacaag
aagaacgccggcttcaccccagaggagcgtgagggcttcggccagctgctggagtccggt
tttatcgacagcttccgcgagctctacccagagcaggccaacgcctacaccttctggacc
tacatgatgaactcccgcggaaagaacgtcggctggaggcttgactactttgtactgtcg
tccagtctgctgccaggcctgtgcgacagcaagatccgcaacaaggccctgggaagcgac
cactgccccatcactctgcacatagctgtgtag
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