Etheostoma spectabile (orangethroat darter): 116673685
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Entry
116673685 CDS
T08457
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116673685 (ddx4)
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116673685 (ddx4)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116673685 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Utp25_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116673685
NCBI-ProteinID:
XP_032361790
LinkDB
All DBs
Position
24:14708284..14726543
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AA seq
658 aa
AA seq
DB search
MDEWDEGETSTTNTNAVTSHTSSEEDLSLDIITFLGTQGDSWNTGVGDFGRGRGGRGRRG
GFKSSFSSDGDENGNDGGGYNNTGGDRGGFRGRGRGRGFGRTDCGEFNGDDDGERENGFR
GGSRGGRGSRGGGFRQGNDQGAKGGFGGGYRGKDEEIFSYGGDNDPEKKDASDGDRPKVT
YVPPTLPDDEASIFSHYESGINFDKYDDIMVDVSGTNPPQAIMTFDEAALCESLRKNVNK
SGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQLMADGVAASSFSELQE
PEAIIVAPTRELINQIYLEARKFAFGTCVRPVVVYGGVSTGHQIRDILRGCNVLCGTPGR
LLDMIGRGKVGLSKLRYLVLDEADRMLDMGFEPDMRRLVGFPEMPSKENRQTLMFSATYP
EDIQRMAADFLKTDYLFLAVGVVGGACSDVEQTFIQVTKFSKREQLLDFLKTTGTERTMV
FVETKRQADFIATYLCQEKVLTTSIHGDREQREREQALADFRSGKCPVLVATSVAARGLD
IQDVQHVVNFDLPNNIDEYVHRIGRTGRCGNTGKAVSFYDPEADGQLARSLVTILSKAQQ
EVPSWLEESAFSGPGATGFNPSRKGFASTDSRKGGSFQDNGTRSQPAAQTAADDEEWE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgggatgaaggggaaacgtctactactaatacaaatgcagtgaccagccac
acctcaagtgaagaggatctatcattggacataatcacctttttaggcacacaaggagac
tcctggaacactggcgttggtgactttggaaggggtcgtggtggcagaggcagacgagga
ggatttaaaagctcattttcctcagatggtgatgagaatgggaatgatggtggtggctat
aacaatacaggaggagatagaggtggtttcagaggcagagggcgtggcagaggatttggc
aggacagattgcggtgaattcaatggagatgatgatggagagcgtgaaaacgggtttaga
ggaggaagcagaggaggaagaggcagcagaggaggtggtttcagacaaggtaatgaccag
ggtgccaaaggaggctttggaggaggctaccgtgggaaagatgaagagatcttctcttat
gggggtgataatgatccagaaaagaaggatgcaagtgatggtgacaggcccaaggtcacg
tatgttcccccaacactccctgacgacgaggcctccattttttcccactatgagtcaggc
attaactttgacaagtatgatgacatcatggtggatgttagtggaaccaacccaccgcag
gctatcatgacttttgatgaggcagcattatgcgagtccctgagaaaaaatgtcaacaag
tctggttatgtgaagccgacccctgtgcagaagcacggcatcccaatcatctctgccggt
agagatctcatggcctgtgcccagactggatctggtaaaacggctgcattcctgctccct
attctgcagcagctgatggcagatggtgtagcagccagcagctttagtgagctgcaggag
cccgaagccatcattgtggccccaaccagggagctcatcaaccagatttatctggaggcc
aggaagtttgcttttgggacatgtgtacgcccagtcgtggtttatggtggagtcagcact
ggacaccaaatacgagacatcttaaggggatgcaatgtgctgtgtggaacaccagggaga
ctgttggacatgattggaagaggaaaggttgggttgagtaagctgcggtacttggtgctc
gatgaggctgaccggatgttggatatgggttttgagcctgacatgcgccgcttggtgggt
ttccctgaaatgccgtccaaagagaaccgccagactctgatgttcagcgccacctaccct
gaagacatccagagaatggctgcggacttcctcaagacagattatttgttcttggctgtg
ggtgtggttggcggagcctgcagtgatgtggagcaaacatttatccaagtcaccaagttc
tccaagagggaacagctccttgactttcttaagaccactggaacggagcgcaccatggta
tttgtggagaccaagagacaagcagatttcattgccacttacctgtgccaggagaaggtt
ttgactaccagcattcatggtgatcgtgagcagcgggagcgagagcaggctctggcagac
ttccgctctggcaaatgtccagtcttggtggcaacctcagtagctgcccgtggtctggat
attcaagatgtacagcatgtggtgaactttgatctccctaacaacattgatgaatatgtc
caccgtattgggagaactggccgctgtggtaacactgggaaggcggtgtctttctatgac
cccgaagctgacggccaattggcccgctcccttgttacaattctgtccaaggcccagcaa
gaagtaccgtcatggttagaggagtcggcgtttagcggccctggagccacaggcttcaac
ccctccaggaagggctttgcctcaacggactccaggaagggaggatctttccaagacaac
ggcacaaggagccagcccgctgctcagactgcagctgatgatgaagaatgggaatag
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