KEGG   Etheostoma spectabile (orangethroat darter): 116673935
Entry
116673935         CDS       T08457                                 
Symbol
zc3h13
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 13
  KO
K22909  zinc finger CCCH domain-containing protein 13
Organism
esp  Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:esp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:esp03019]
    116673935 (zc3h13)
Messenger RNA biogenesis [BR:esp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    N6-methyltransferase complex
     116673935 (zc3h13)
SSDB
Motif
Pfam: zf_CCCH_4 zf-CCCH zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 116673935
NCBI-ProteinID: XP_032362211
LinkDB
Position
24:complement(13824908..13837058)
AA seq 1813 aa
MSKIRRKVTVENSKTISDSSSSSSTTTSSTSNPAAPSRRPSVFERLGPSTGSNAADSHCR
NWLKTGNCSYGNTCRYTHGTQPRGKGFSFSRSAERPTGDLRERMKNKRQDADPENVKRDL
DEPTSPTAKQRDSSRGRHREKEDIKITKERTPASEEEPTEWETNREDSDIGDYDYELSLE
MKRQKIQRELMKLEQENLDKREEIFIKKDEAPTKTRTTAIPKASPEPISSKDSPSARKST
GSPKHKSGVKGPGSGKKEKKAPLSSPVSETTRPSKGSHSKKKGPRTPSPPPPVPLDIPVI
GKKHKGKHKNKEKSEEKLKEAKDRGRDAEKHKEKKEKRRDRSDSSHKAKRSVTSEERSGS
VSSPFRGTSPPARKKSTSPKASSHKTPVLASPPRRSPTPPRHHHTPTPPRHHSPSSHSGS
SAQRHSSSPRRRRSSSLTYHRSTAALASASSPPCSRRSRSPPASHDPSSPPRRSDRSSPS
QRRSRGRERSRGERERSPPAQERRHERRDESRSKREKDSVRDDRDYDSEQVSSRDARDDR
EPRESRERRDARDRGRETARDSRDHRDNRDIKDSRESRTETRSSRESLERRDRERERDRE
RKDRERERERTDTHRKEEPAQDDRSYGRGHGREDGGRADGRTENRTDRAEKNGRGRGRAN
ETSEKGSNRNSRGSQLESSHDNWDPRSSAVRERSAERSTDRSVTERSSERGSDRDRYDGD
RRGEHARDSSYDRRGGHGERDRRDNRERDQRAASPNRHQGRSEESERDERREERRTDRTE
ERRDDRTRDRERERDREREREKEKEKDREREREKEREKEAERERVRERERERERERERER
EEREREREERERERERKERERERERELRERERQREWEERERGRDERRERRDDDRPVRETR
DDRKTSRKRPRVESSPSPRASPKRATRDLSPADSDGYNSAEEKSADKNRMLSQVVRPQEP
LLRSPLRAALSDEKPSHWKDEERRGAGDKRDTRSRHEDPEPRVERIRGGDRRGEHLADGP
SDSRSRGREQRESTPPPPPPALAPGNEDTAGPSXHEEGKKKTKSQRKGLKKGRKEEEIGG
GSSSSLAGAGDRFNPEPPASVPADGPSPILSPRKVAKKKALERKRKRSRESDVSDEDSSA
PQPHNKRKRGPRTPPPSIRPDNRGTGANAEPSPLTKMDNFSDWSDEEVTDRGAPLETQAP
PAPAERTPAEPLKRGVGPRVGRDRERCNPAPIAPLLPQDPSILMQTLPPQPLMSQPMLRK
LPPEQARSSSMGSNQSRASSRRLRSPSNESAHRDDPQGPRARRGRLQGANSRDRERERER
ERERDRPVVNDPPVVERKSRIDQLRRGEPSRSTSSDRQDSRSLSSRRSSPDSERQARSMS
RAGSYDSREREREREPFERERDRKDLRPQPPLPPQPQQQQPLLLQQPLQQQRDWEPEPRD
WPSRGLMRPGRESILRERDIRDRERLLPEGQFQQHERERERDRERDSRGDRGGDRERERM
MMMDLPPHGDPRVPGRGDLRGDMRGDLRVDMMRQERGDYEPLLPREAFSPPEPEKPSNSH
HLMGEQRELEKTESIDGDDDGKEDEGQSVASVGEEYEPISDDELDEILADSQKKEDHQQD
DEKITGPLDVIDVDWSSLMPKQKQEPRAAGAALLRFTPGAVLLRAGISKRLAGPELLEQV
REVCKSELDDPKDADKLFEHDLGALNMAAMNRRVERAGLLRNLGPCCKALCARRDFAIRR
QLLKNDKGQTKQYPTTPVVDNELLQMSMRLFRRTMAGQASGPERSDSGSAPAAEVAPAGS
SKLGTAQPEVCVS
NT seq 5442 nt   +upstreamnt  +downstreamnt
atgtccaagatcaggcggaaggtaacagtggagaattcaaaaaccatatctgatagcagc
agcagcagcagcaccacgaccagcagcaccagcaaccccgccgccccctcccgccggccc
agtgtgtttgaaagactcggccccagcactgggagtaatgctgctgatagtcactgtaga
aattggctgaagaccggtaattgcagttacggcaacacttgtcgctacacacatggaact
cagccacgaggcaaaggatttagctttagtcggtcagccgagagacccacaggtgatctg
cgggagaggatgaagaataaaagacaggatgctgacccagaaaacgtgaagcgagaccta
gacgagcccacatcccccacagcgaaacagagagactcctccagaggccgacacagggaa
aaggaggatataaagattacaaaggagcgcaccccagccagtgaagaagagcccacagag
tgggaaaccaatcgtgaagactctgatattggtgactacgactacgagttatcactagag
atgaagcgccagaagattcaacgtgagctgatgaaattggagcaggaaaacttggacaag
agggaggagatattcatcaagaaagatgaggcccccaccaaaacaagaaccaccgccata
ccaaaggcctccccagagccgataagcagtaaagattcaccctcggccaggaagtccact
ggatcccccaaacacaaaagtggagtcaaaggcccaggctctgggaagaaagaaaagaag
gccccactatcctcacctgtttcagaaactaccaggccttcaaaagggagccacagtaag
aagaaagggccccgtacccctagtcctcctcccccagtcccgctggacattcctgtgata
gggaagaaacacaaaggcaagcacaaaaacaaggagaagtcagaggagaagctgaaggaa
gcgaaagatcgggggcgagatgcagaaaaacacaaagagaaaaaggagaaacgcagggac
cgatcagacagctcccacaaggcaaagcggtcagtgacgtcggaggagcgttctggtagc
gtgtcatctccctttaggggcacttcaccaccagccaggaagaaatccacatctccaaaa
gcttcatcccataagacgcccgtactggcctccccacctcgcaggtctcccactcctccc
cgccaccatcacacccccactcctccccgccaccactctccctcctctcactctggctcc
tctgcccagcgacactcttcatctccccgccggcgccgctcgtcctctcttacataccac
cggagcaccgcagccctggcctctgcctcctcccctccatgctcccggcgctcccgatcg
ccccctgcctcccacgacccctcctcacccccccgccgatctgacaggtcgagccccagc
cagcggcgctccaggggccgcgagaggagccgtggtgaaagagagaggagtccgcctgct
caggagcgcagacatgagcgcagagatgaaagccgcagcaagcgagagaaagacagcgtc
cgcgacgaccgggactatgactctgaacaggtctcatcacgggacgctcgcgacgaccgg
gagcccagagagtctcgcgagaggcgggatgctcgcgaccgaggaagggaaacagcccga
gactctcgcgaccaccgagacaacagggacataaaggactccagagagagcaggacggag
actcgctccagtcgagagtcgctggagcgccgtgaccgcgaacgagagcgggaccgggaa
aggaaagacagagagcgagaaagagagagaacagacacccacaggaaggaggaaccggct
caggacgacaggagttatgggagaggtcatggacgcgaagatggagggcgtgctgatgga
cggacggagaacaggacggacagagctgagaagaatggacgagggagagggcgtgctaat
gaaacctctgagaaaggctcaaaccgaaactcccggggttcccaactggaaagcagccat
gacaactgggatccacggagcagcgcggtgcgcgaacggagcgcggagaggagcacagat
cgcagtgtgaccgaaagaagctctgagaggggttcagaccgagatcgctatgacggcgac
aggagaggagagcacgcccgagactcctcgtacgacaggagaggagggcacggcgagcgg
gatcgcagagacaaccgagagagagatcaaagagcagcctcaccaaatagacaccagggg
agatcagaggagtctgagagggatgagaggagagaggagcgcaggacagatagaacagaa
gagaggcgcgatgacaggacccgagaccgggagcgagagagggacagggagcgggagagg
gagaaggaaaaggagaaggacagggagcgagagagggaaaaggagcgagagaaagaggct
gagagggagcgggttagagagcgagagcgggagagggagcgagagagggaaagggagcgc
gaggagcgggagagagaaagggaggaacgagagagggagagggagaggaaggagcgggag
agggaacgagagagggagctacgggagcgagagaggcagcgggaatgggaggagcgagag
aggggaagagatgaaaggcgggagaggcgagatgacgaccggcccgtcagagaaacacga
gacgaccgcaaaacaagtcgtaagaggcccagggtggagagcagcccgagcccccgagcc
tctcctaagcgagcaactcgggacctcagtccagcagacagcgacggctacaacagtgca
gaagagaaaagtgctgacaaaaatcgtatgctgagccaggtggtgcggccccaggagccc
ttgttgcgttctccgctgagggctgctctatcggatgagaagccaagccactggaaggat
gaggagcgcagaggtgccggggacaaaagggatacgcgcagccgtcatgaggacccggag
cctcgtgtagaacggattagaggaggcgacagacgaggagagcaccttgcagacggccca
tctgactcccgtagcagaggcagagagcagcgagagtctacgccgcctccccctcctcca
gccctcgcacctggcaatgaagacaccgctggccccagtncccacgaggagggcaaaaag
aagacaaagtcgcagaggaagggcttgaagaagggtcgcaaagaagaggaaataggcggt
ggcagcagcagcagcctggctggggcaggagatcgtttcaaccccgagcccccagccagc
gttcctgcagatgggccttcacccatactttcacccaggaaagtggccaagaagaaggcg
cttgaacgaaagaggaaacggtcacgagaatctgatgtgtctgatgaggactcatctgcc
cctcagccacataataaaaggaagaggggtccccggacgccaccaccctcaataaggcct
gataatcgaggtactggagccaacgcagagccatctcctctgaccaaaatggacaatttc
agtgactggtcagatgaggaggtcacagaccgaggagcaccgctggaaacgcaagctcca
ccggctcctgctgagaggactcctgctgagcctcttaagagaggggttggtcccagggtg
ggcagggacagggagcggtgcaaccctgctcccatcgcccctctgctcccccaagatccc
tcgatattgatgcagactctgcctccgcagcccctcatgtcccagcccatgctccgcaaa
cttcccccagagcaggcacgcagcagcagcatgggaagcaaccagagccgcgcgtcgtcc
agacgcctgcgatcaccctccaacgagtcagcccatcgagatgatccgcaaggtccacga
gcccgccggggcaggctgcagggcgccaactcacgggaccgagagagggaaagggagaga
gaacgggagagagacaggccggtcgtgaatgaccctccagtggttgagagaaagtctcga
attgaccagttgaggagaggagagcccagccgcagcacctcctcagaccgacaggattcc
cgcagcctcagctccaggcgcagctctcctgactctgagaggcaggcccggtccatgtct
cgcgccggctcctatgacagtcgcgagcgggagagagagagggagccatttgagcgggaa
cgagaccgaaaagacctccggcctcagccgccgctgccacctcagccccagcagcagcag
cccctgctcctccaacagcccctacaacagcagagagactgggagcccgaacctagggac
tggcctagcaggggactgatgcgtccaggccgggaatctatcctgagggagcgggatatc
agggacagggaacgcttactccctgaaggacaatttcagcagcatgaacgggagcgggag
agagacagagagagagacagtagaggtgacagaggcggcgatcgagagagggagaggatg
atgatgatggatctaccgcctcacggggaccccagggtccccggacgaggagacctgagg
ggcgatatgagaggagacctgcgagtggacatgatgagacaagagaggggcgactatgag
cctctgctgccaagagaagccttcagccccccagagccggagaaaccgagcaacagtcac
catctcatgggagagcaacgggagctggagaagacggagagcatcgacggagacgatgat
ggcaaagaagatgaaggccagtcggtggcatctgtgggagaggagtatgaaccaatcagt
gatgatgagctggatgaaatactggctgacagccagaaaaaagaggatcatcagcaagac
gatgaaaaaattacaggtcctcttgatgtcattgatgtggactggtccagcctgatgccc
aaacagaagcaggaaccccgggcagcaggggcagctttgctccggttcaccccaggggcc
gtgcttcttagggcgggcatctccaagcgacttgctgggcctgagctcctggagcaagtc
agagaggtgtgcaagtccgagctggatgaccccaaagatgctgacaagctgtttgagcat
gacctgggggccctgaatatggcagccatgaacaggcgggtggaaagggccggtttactg
agaaacctcgggccctgttgcaaggccctgtgtgcccgcagggacttcgccatccgccgg
cagctgttaaagaatgacaagggccaaaccaagcagtaccccactacgcctgtggtagac
aacgagctgctgcagatgagcatgcgtctcttcagaaggaccatggctggccaggcctca
gggcccgaaaggtccgacagcgggtcagcaccggccgccgaggtcgctccagctggtagt
agtaagctcggcacagcacagcctgaggtgtgtgtgtcctga

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