Etheostoma spectabile (orangethroat darter): 116674006
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Entry
116674006 CDS
T08457
Symbol
als2
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116674006 (als2)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116674006 (als2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
PH
RhoGEF
Tudor_2
Motif
Other DBs
NCBI-GeneID:
116674006
NCBI-ProteinID:
XP_032362365
LinkDB
All DBs
Position
24:7723678..7814089
Genome browser
AA seq
1695 aa
AA seq
DB search
METQRKSSGDDHGGERGLLHTWKGYSCSVTPERLFLPGPVLQVALGTRHGVLLVEGGQVY
SFGELPWKQSQAAEPAKPTLESALSGQRVVAVAAGSFHSGAVTEDGGVHMWGDNSSGQCG
LSGLSAVPNPTPVALLDSDTASPPTAPVLELACGEQHTLALSAQREVWAWGSGRQLGLSV
ATFPVWKPQKVEHLAGRYVLQVACGASHSLALVRCLSSQDVHRPLVDKCRQCNQLLFTMT
DKEDHVIISDGHYCPLGAEPAEDGDGLEAPASSSQVLRTSPSEPTLSYHAAASNPPALAG
GTDPTQDSENEASAGSAASNGAPPASDSGLSAQSNGGVLFGVKGSPYPDEQAVKDYLKRL
SENTQADQTVKATLLTSEGRLTTGSTLNNLVASCASAVGERVASTYEALSLKKMMNFYLP
SGVARADGPVAGLTGVTGDNTAERVRQEDSTQAKKSSSTGDIREEEAEGLRRRLSLPGLL
SQGRYAVHLLSSSYTLLLSPRLLRKAGRTRMRAVALTPLGGAVPGTQELFPTLQTEVWSW
GQGEHGQLGHGDSLARLQPLCIKSLNNKEVVRVAAGAHHSLALTAQSQVFSWGSNSSGQL
GHMESPTTVPRLAKLSEGIRVWDISAGDRHTLLLADGDCILPIIYYSGLQVKEGADESHA
KGAGQQEEGKEEEERVGGYTQQPVLLPFCMDLGYVSNVVAGGQRCVALSDRNVMGFIASL
HELASAERKFYCKLCTIKTQIIRPLLELESLSSALSQTAMGLLHTLAGRFSLLCHLTGQH
SASLTANLRRVRDVKSLLILDHASIFLDSYHEYCSAVGNFQVMGGFQTLTKPSLDFFGKN
PELLKRLSECSEENPTMADLLVALFFLPTHHLHEYGRLLLKLATCFEVCSNEYQVLQDSC
SKFESLTQLLKRKRKDADYTCHFWKSFPGKMTDSLRKPHRRLICESSNKALTLQNAGRFS
VNWFIVFNDALVHAQGVAPCKNLFSTHHVFPLATLWVEPIPEENTGLYGLKVITPEETFH
LLASSAMEKAKWLRSINQAVEQALSGAGQDTTSVDSGSGQKLEPPVSRTASYTFYKDGRL
KEATYEGCWLAGKPNGRGVLKWPDGRIYTGTFKNGLEDGFGEFWAPNKTLNKSDHYQGHW
KDGKMHGVGTYRYASGEVYDGFFQDNMRHGHGVLRSGKLNTSSPSVFIGQWLQDKKTGYG
VFDDITKGEKYMGMWQDHLRQGTGVVVTQFGLYYEGAFKDNKMMGTGILLSEDDTTYEGE
FSDDWTLNGKGVLTMANGDYLEGSFNGEWGSGLKVAGSYFKPHLFLDTDKDKTRAVKLGR
LCVRAEDKWKAVFEECWRQLGCEEPGRGENGTAWENIAVALTTNRRHIQDSPETLSLSHS
RTLESLEVIPQHVGVITMERYHTVRLYLVKACDTPLHPLGRLLETLVAVYRMTYVGVGAN
RRLLPQAVSEIKSYLNRIFQIVRFLFPDMPEEGGLIPEPTTSIQDKKDPGSSDAPLESPK
PGRVVSSSALLLPVLLPRLYPPLFTLYALEKEREDDVYWECVLRLNKQPDLALLAFLGVQ
QRFWPVSIPVPMPALGEKQQVLSSTKDVCFASAVETLQQISTTFTPSDKLQLIQLTFEEI
TQEVQALLKQDFLWSMDDLFPVFLYVVLRARIRNLGSEVSLIEDLMDPCVQHGEHGIMFT
TLKACYYQIQHEKIT
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccagaggaagagctctggggatgaccacggtggagagcgaggcctgctccac
acctggaagggctactcctgcagtgtcacccccgaaaggctgttcctccctgggccggtc
ctccaggtcgccctgggcacacggcatggagttctgctggtggaaggcggacaggtgtat
agttttggggagttgccatggaagcagagtcaagcggccgagccggccaagcccaccctg
gagagtgcgctcagcggccagcgcgtggtcgccgtcgcggctggaagcttccacagcggg
gcggtgacggaggacggcggcgtccacatgtggggcgacaacagctcggggcagtgcggc
ctgtcgggcctcagcgccgtccccaacccgactccggtcgccctgttggactctgacacc
gccagccccccgactgctccggtgctggagctggcctgcggggagcagcacaccctggca
ctgtcggcccagcgggaggtgtgggcgtggggcagcgggcgccagctgggcctcagcgtc
gccaccttccccgtctggaaaccccagaaggttgagcacttggcgggcaggtatgtgctc
caggtggcctgcggagcgtcccacagcctggcgctggtgcgctgcctgagctcgcaggac
gtccaccgccccctggtggacaaatgcagacagtgtaaccagctgctgttcaccatgacg
gacaaagaggaccacgtcatcatctctgacggccactactgcccgctcggcgcggagccg
gccgaggacggggacgggctggaagcgcccgcttcgtcgtcgcaagtcctcagaacatcc
ccgtccgagccgaccctctcctaccacgccgccgcctcaaaccccccggcgctcgcagga
ggcaccgaccccactcaggactcggagaacgaggcgtcggctgggtcggccgcgtccaac
ggagcaccaccggcgtcggactcgggcctctcggctcagtccaatggcggagttcttttc
ggggtcaaggggtccccctatccggacgagcaggccgtcaaagactatctgaagagactg
tcggagaacacgcaggcggatcagacagtgaaggcgactctgctgacgtccgaaggaagg
ctgaccaccggctccacgctcaacaacttagtggcgtcctgcgcctcggccgtgggcgag
cgggtcgcctccacctacgaggccttgtccctcaaaaagatgatgaacttctacctgccc
tcaggagtggcgagggcagacgggccggtggcggggctcacgggcgtcacgggcgacaac
accgcagagcgcgtccgccaggaggactccacccaggccaagaagagctccagcacgggg
gacatccgcgaggaggaggccgagggtctgcggcgccgcctctcgctcccaggactcctc
tctcagggtagatacgctgttcacctcttatcctcctcctataccctgctgctgtccccg
cggctgctgaggaaagccggtcggacgaggatgcgtgcagtcgccctcaccccattggga
ggggcggtccccgggacccaggagctgtttcccaccctgcagacggaggtgtggagttgg
ggccaaggcgagcacggacagctgggacatggagacagcctggccagattacagccgctg
tgcatcaagagtctgaacaataaggaggtggtgcgggtggcagccggtgctcatcattcc
ctcgctctgactgctcagtctcaggtgttttcatggggaagtaacagctctggtcagctt
ggacacatggagtcacccaccactgtcccccgccttgcaaagctgtcagaggggatccgg
gtctgggacataagcgctggagatagacacactctcctgctcgcagacggagattgcatc
cttccaatcatttactacagcggactgcaggtgaaagagggggcggatgagagccacgcc
aagggagcaggtcaacaggaagaagggaaggaagaggaggagcgagtagggggctacacc
cagcagcctgtactactgcccttctgcatggacctcggttatgtgagcaatgtggttgcg
ggcggccagcggtgcgtggcgctgtcggacaggaacgtgatgggcttcatcgccagcctc
cacgagctggcttcagccgagaggaagttttactgcaagctgtgtaccatcaagacacag
ataatacgcccgctgctggagctggagtctctgagttcggccctcagccagacggccatg
gggctcctccacactctcgcaggccgattcagcctcttgtgtcacctaaccgggcagcac
tccgccagcctcaccgcaaacctgcgccgagtccgtgacgtcaaaagcctgctcatccta
gaccacgccagcatcttccttgactcttaccatgagtactgcagcgctgtgggcaacttc
caggtgatgggaggtttccagaccctgaccaaaccctcactagatttctttgggaagaat
cccgagctgcttaaaaggctgtcggagtgcagcgaggagaaccctaccatggccgacctc
ctggtggcgctcttcttcctcccaacacaccaccttcacgaatacggccggctgctgctc
aaactggccacctgctttgaagtgtgctccaatgaataccaggtgctgcaggacagctgc
tctaagttcgaatctttgacccaactgctgaagagaaaaaggaaagatgctgactacacc
tgtcatttctggaagagcttccctggcaaaatgacggactctctccggaagcctcaccgc
cggctcatctgcgagagcagcaacaaagctctgacgctgcagaacgccgggaggttctcc
gtcaactggttcatcgtgttcaacgacgctttggtccacgcacagggcgtggcgccttgt
aaaaatcttttctccacccatcacgtcttccccttggccactctttgggtggagccgatt
ccagaggagaacactggcctatatgggttaaaggtgatcacaccagaggagacgttccac
ctgctggcctcctctgccatggagaaggccaagtggcttcgctctatcaaccaggcggtg
gagcaagccttaagcggagcgggacaggacactacgtcagttgactctggatcggggcaa
aagctagaaccccccgtctccaggacggcctcctacactttctataaggacggacggctg
aaagaggcaacgtacgaaggctgctggctcgccggcaagcccaacggcaggggagtctta
aaatggcctgatgggagaatatacacgggcaccttcaagaacggactggaagatggtttt
ggtgaattttgggctcccaataagacgctcaacaaaagcgatcactatcaaggtcactgg
aaagatggcaagatgcacggcgtcgggacgtacaggtatgccagcggtgaggtttacgat
ggattcttccaggataacatgcgacacggccacggcgtgctgcgcagtggcaagctcaac
acctcctcccccagcgtcttcattggccagtggctgcaggacaagaagaccggctacggc
gtctttgatgacatcacaaaaggggagaagtacatgggcatgtggcaggatcacctgcgg
cagggcaccggggtggtcgtcactcagtttggcctctactacgaaggagccttcaaagat
aacaagatgatgggcactgggatcctcctgtcagaggacgacaccacgtacgagggggaa
ttctctgacgactggactctcaacggaaagggcgtgcttaccatggccaacggtgattac
ctggagggctccttcaacggcgaatggggctccggcctcaaagtggcggggtcctacttc
aaaccacacctttttttggacaccgacaaagacaagacccgcgctgtgaagctggggcgt
ctgtgtgtgcgcgcggaggataagtggaaggcagtgttcgaggagtgttggaggcagctg
ggctgtgaggagccgggccgaggagagaacgggacggcctgggagaacatcgctgtggcc
ctcaccaccaaccgacgacacatccaggacagtccggagacgttgtcactaagccacagc
agaaccctggagagcctggaggtcatcccgcagcacgtaggcgtgatcaccatggagaga
tatcacaccgtccgcctctacctcgtcaaggcatgtgacacccccctccacccactgggc
cggcttttggagaccctggtggcggtctacaggatgacctacgttggagtcggagccaac
cgccggctgctgcctcaggctgtcagtgagatcaagtcgtacctcaaccgcatcttccag
atcgtcaggtttcttttcccagacatgccagaagagggcggtcttattccagagccaacc
accagcatccaggacaagaaggacccaggatccagcgatgccccgctagagtcacccaaa
cctggtcgtgtggtgagcagctcggctctgctgcttccggtcctgctcccccgcctctac
ccgccgctcttcaccctctacgccctggaaaaggagagagaggacgacgtctactgggag
tgtgtcctccgtctcaacaagcagccggacctggccctgctcgccttcctgggtgttcag
caaagattttggcctgtttccattcccgtcccaatgcctgcacttggagagaagcagcag
gtcctctctagcaccaaggacgtctgctttgcttccgcagtggaaacactacaacagatc
agcacaacattcaccccgtcagataagctgcagttgatccagctcaccttcgaggaaatc
acccaggaggttcaggcgctgttgaagcaggacttcctgtggtccatggacgaccttttc
cccgtcttcctctacgtggtgctgcgtgcacgaatcaggaacctggggtcagaggtcagc
ctgatcgaagacttgatggacccctgtgtgcagcacggagagcatgggatcatgttcacc
acactcaaggcttgttactaccagatccagcacgagaagatcacttaa
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integrated database retrieval system
