Etheostoma spectabile (orangethroat darter): 116674208
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Entry
116674208 CDS
T08457
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116674208
04082 Neuroactive ligand signaling
116674208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116674208
Ion channels [BR:
esp04040
]
Ligand-gated channels
GABA-A
116674208
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
116674208
NCBI-ProteinID:
XP_032362652
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Position
24:4450211..4511699
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AA seq
547 aa
AA seq
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MDPDRTGGRGMRRNMFLWWILLLFSQGFVFRNVQGELPFISGNNAAMLVNWNAVDGNKKL
FAIYDTSVNEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNM
DYTLTMYFQQYWRDKRLAYLGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM
IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDTAV
TGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITIL
SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLA
LLEYAFVNYIFFGRGPQMQKKLAEKAEKANNERAAKYDAAREAGSRTASLKRSNQVKGLR
HSRSAEPHGHGNILLTTLEIHNEVAGGEITTSLADIRNSQSMVQLDSTASSHIQYRKQSG
GIGPRSTSKHSLDRAAQLKRSRLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSLFNL
VYWLYYV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgacaggactgggggcagaggaatgaggaggaacatgttcctctggtggatc
ttattgcttttctctcaaggatttgtatttcgcaacgtccaaggggaacttccttttatc
tcggggaacaatgctgccatgctggtcaactggaatgctgttgacggaaacaagaagttg
ttcgcaatctatgacacgagcgtcaatgaaccgggcaacatgtctttcgtgaaggagacg
gtggataaactactgaagggatatgatatccgactgaggccggactttggaggggcccct
gttgcagtcgggatgagcatagacgtggccagcatagacatggtgtcagaagtcaacatg
gactacacattgaccatgtatttccaacagtactggagggacaagcgtctagcctattta
ggaatccccctcaacttgaccctggataacagggttgccgaccagctctgggtccctgac
acctacttcctcaacgacaaaaagtctttcgtccacggagtcaccgtcaaaaaccgcatg
atccgcctgcatccagatggaaccgttctttacggcctcaggataactactacagcagcg
tgtatgatggatcttaggaggtatcccctggatgaacagaactgcactctggagatagag
agctatggctacaccacagacgacatagagttttactggaaaggaggcgacacggctgta
acgggggtgacgcggatcgagttgcctcagttctccattgttgattacaagctggtgtcc
agaaacgtagtcttttccacaggtgcctaccctcgactgtctctgagcttcaagctaaag
aggaacatcggctacttcatcctgcagacatacatgccatcgatcctgattaccatcctc
tcttgggtgtccttctggataaactacgacgcgtcagcagccagagtggctctagggatc
accacggtgctgacaatgaccactatcaacacccacttgagagagacgctgcccaagatt
ccctacgtcaaggccatcgacatgtacctgatgggctgcttcgtcatggtcttcctggcc
ctgctggagtacgccttcgtcaactacatcttcttcgggaggggtccccagatgcagaag
aagctagcggagaaggcagagaaagccaacaatgagagggcagccaagtacgatgctgca
agggaggcaggtagtaggaccgcatccctaaagcggtccaatcaggttaaaggtcttcgc
cactcacgctcggcggaacctcacggccacgggaacatcctgctaaccaccctggagatc
cataacgaagtggcgggaggtgagatcaccaccagcttggcggacattaggaactctcag
tccatggtgcagttggacagcaccgcctcgtcgcacatccagtaccgcaagcagagcggc
gggatcggcccgcgctccaccagcaagcactccctggaccgggctgcccagctgaaacgc
agccgcctgcggaggcggtcctcgcagctcaaaatcaaaatccccgacctgacagatgtg
aacgccatcgaccgctggtcacggatcatcttcccttctgttttctcactgttcaacctc
gtctactggctctactatgtctga
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