Etheostoma spectabile (orangethroat darter): 116674209
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Entry
116674209 CDS
T08457
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116674209
04082 Neuroactive ligand signaling
116674209
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116674209
Ion channels [BR:
esp04040
]
Ligand-gated channels
GABA-A
116674209
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116674209
NCBI-ProteinID:
XP_032362657
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Position
24:complement(4446310..4473781)
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AA seq
473 aa
AA seq
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MVVMDLHTVTGLNSGQVSRISVMTRFVLSLLLLCGCQNSLCLSSSEAQKEAAANDNSTVF
TRILDGLLDGYDNRLRPGLGENVTEIQTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERL
CFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGSLLYTMRLTI
SAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTEGEAKPVVVAEDGSRLNQYHLIG
LTSSTENIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPAR
TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSW
AWDGKKALEAQPPKKRDPMVLSKKPNNVCSAGVNYTPNLTKDVSISTISNTTSVQLRASE
TKMVDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNRVPLVEGVVTST
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggatctgcatacagttacaggtctgaacagtggacaagtgagtagaatt
tcagtcatgacgaggttcgtcctttccctcctgctcctctgtggatgccaaaatagtctc
tgcctgtcctcctcagaggctcagaaggaggcggccgccaacgacaacagcacagtgttc
accaggatcctggacgggctcctcgacggttacgacaacaggctgcggccggggctcgga
gaaaatgtcacagagatccagacgaatatttttgtcaccagctttggcccggtgtctgac
acggagatggaatataccatagacgtcttcttccgtcagagctggaaggacgagcggctg
tgcttcaaagggcccatggagatgctgccgttgaacaacctgctggccagcaacatctgg
acccccgataccttcttccttaatggcaagaagtctattgctcataacatgaccacgcct
aacaagctgctgaggctgaaggacgacggcagtttgctttacactatgagactgaccata
tcagcagaatgccccatgcagctggaggatttccccatggatgcacatgcctgccctctc
aagtttggcagctatgcctatccggtgtcagaggtggtctacacttggactgagggagag
gctaagcctgtggtggtggcagaagacggctctagactcaaccagtatcatctcatcggg
ttaacgtccagcacagagaacatacacacaagcagaggacagtacacagtgatgatggcc
cacttctacctgaagaggaagattggatattttgtcatccagacatatatgccgtgtttc
atgactgtaatcctgtcccaggtgtcattttggctaaacagagaatccgttcctgcaagg
actgtctttggggtgaccactgtgctgaccatgaccaccctcagcatcagcgcaaggaac
tcactccctaaagttgcctacgctacagctatggattggttcattgccgtctgctacgct
tttgtcttttctgccctcatcgagttcgccacggtgaactacttcaccaagaggagctgg
gcctgggacggcaagaaggccctggaagcacagcccccgaagaaacgagaccccatggtg
ctgtccaaaaagcctaacaacgtttgctcggcgggcgtcaactacacccccaacctcacc
aaggacgtgtccatctccacgatctccaacacaacgtcggtgcagctccgagcctcagag
accaagatggtggaccccaagaaaacctacaacagtgtcagcaagattgacaagatgtct
cggatagtgtttcctgtcctctttggaaccttcaacctcgtctactgggccacgtacctt
aacagagtaccgctggtggaaggagtggtgacgtcaacgtaa
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