Etheostoma spectabile (orangethroat darter): 116674210
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Entry
116674210 CDS
T08457
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-3-like isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
esp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116674210
04082 Neuroactive ligand signaling
116674210
04519 Cadherin signaling
116674210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116674210
Ion channels [BR:
esp04040
]
Ligand-gated channels
GABA-A
116674210
SSDB
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116674210
NCBI-ProteinID:
XP_032362659
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Position
24:complement(4361386..4444366)
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AA seq
450 aa
AA seq
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MTIKFVLILFIVLDQGARSDLLEYGDDDEDPNDTTVNQMLVPRSHQEDATLILNNLLKEY
DKTLRPDIGVKPTVVNVGIYVNSIGPVSSIDMEYQIDIIFAQTWVDTRLRYNSSSSMRLT
LNSNMVGLIWLPDTIFRNSKNADSHWITTPNQLLRIWNNGKVLYTLRMTINAECQLQLHN
FPMDEHSCPLVFSSYGYPRDEIVYKWNRNSVETSDQKYWRLYQFDFMGLRNTTDVLTTTA
GEYVVMSVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKSDATPARTALGITTVLTMT
TLSTVARNSLPRVSYVTAMDLFVTVCFLFVFAAMIEYAMLNYYSYSIRRPPVKTQRMAYS
SFTMGHTPRSMMPMGNSLFWQDYDDNCLYECLDGKDCQSFFCCYEECKEGGWRRGRIHVN
IGELDAYSRVFFPTSFLLFNIVYWVSYLYL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaagtttgtgctcatcctcttcatagttctcgatcaaggtgctcgttcggat
ctactggaatatggcgacgacgatgaagatcccaacgataccactgtcaatcaaatgctg
gttcccaggtcgcaccaggaggatgccacacttatactgaacaatttgctcaaggaatac
gacaagacgctgcggccggacattggagtgaaacctacagtcgtcaatgtgggcatatat
gtcaacagcatcgggcctgtgtcatccatcgatatggagtaccagatcgatattatcttc
gcccagacctgggtggacacccgtctgcgctacaacagcagcagcagcatgcgactaacc
ctcaacagcaatatggtcggcttgatctggctgcccgacaccatctttagaaattccaag
aatgccgactctcactggataacaacgcccaatcagctgctccggatctggaacaatgga
aaagtcctctacacactgaggatgaccatcaatgcagaatgccagctgcagctccataat
ttcccaatggacgaacactcctgtcctctcgtcttctccagctacggctacccacgggac
gagattgtgtacaagtggaaccggaactcggtggagacctcggaccagaaatactggagg
ctttaccagtttgatttcatggggctcagaaacactacagatgtgctcacgacgacagca
ggtgaatatgtggtgatgagcgtgtactttgatctcagccgaagaatgggctacttcacc
atccagacctacatcccctgtatcctgactgtggtcctctcctgggtctccttctggatc
aagagcgatgccacgcctgcaaggacagccctaggcatcaccacagtgctaacaatgacc
accctgagcacagttgccaggaactcgctacctagagtgtcctacgtgacggccatggac
ttgttcgtcacagtctgtttcctgtttgtcttcgctgccatgatagagtacgccatgctc
aactactactcctacagtatacgcagacctcctgtcaagacgcagagaatggcctactca
tccttcaccatgggtcacacgcctcggtccatgatgcccatgggcaactccttgttctgg
caggactacgacgacaactgcctgtacgagtgcctggacgggaaagactgccagagcttc
ttctgctgctacgaggagtgtaaagaaggcggctggaggagaggacgcatccacgtcaac
atcggcgagctggatgcctactctcgggttttcttccccacctccttcctgctcttcaac
atagtctactgggtcagctacctctacctctag
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