Etheostoma spectabile (orangethroat darter): 116674503
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Entry
116674503 CDS
T08457
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116674503 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116674503 (dhx36)
03012 Translation factors [BR:
esp03012
]
116674503 (dhx36)
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116674503 (dhx36)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116674503 (dhx36)
Translation factors [BR:
esp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116674503 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
HerA_C
Motif
Other DBs
NCBI-GeneID:
116674503
NCBI-ProteinID:
XP_032362833
LinkDB
All DBs
Position
3:complement(29184945..29217144)
Genome browser
AA seq
1074 aa
AA seq
DB search
MSSGYGGGGGRRGRRGGRGNRDGSRERWDRGGGGGSRGHSSDFDQDRDGGGRGGPRDRPP
PHLKGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDQPGPWRDGW
DARVSTSDSWQTSASSSGHCYFDGDLSEEEKQKIEFKSEEEEEEVTPGQKKATHKSQRYF
SPAVKDEPPEAWDDEEQQQQEEEEEKEKLRREDKDLEFLLQEVARDRSLDDCLKRDLQSK
ESDPKYREMLKFREKLPSYGKKEELVQLINSNRVLVVSGETGCGKTTQVTQFILDDYINR
GVGSMCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSVLYCT
TGIILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLIIVKNLLNFRDDLKIVLMSATLNA
EKFSKYFDNCQIIHIPGLTFPVKEFLLEDIVEMTRYRSKNRDSRPSWKKGFWQGRHSRPE
KEEKEAEYKESWPSYARTLQDRYSDNTIEALEMLDNDEKIDLELIVALIRHIVLNEEEGA
ILIFLPGWAEISSLNDLLTAQKMFQSDRFVIIPLHSLMPTVNQTQVFKKPPPGIRKIVIA
TNIAETSITIDDVVYVIDGGKIKETHFDTNNNISTMTAEWVSLANAKQRKGRAGRVCPGQ
CYHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSIAQFLEKALDPPTEKAVNLA
IKNLIDLNALDRSENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDP
FFIPLGKEKMADMRRKTLSRNSKSDHLTIVNAFQGWVEAKQRGARYEREYCWDNFLSANT
LQMLHNMKGQFAEHLMRTGFVSSRDPKDPKSNVNSDNEKLIKAVIVAGLYPKVAMIRPSN
SKKRPGVKVYTQADGKVCIHPKSVNAEETQFNYTWLIYHLKMRTSSIFLYDCTEVSPFSL
LFFGGDITIQKDEGQETISVDQWIVFRSPARIAHLVKSLKKELDSLLEEKVRNPAPVNWE
NRQSKDCAVITAIIDLITTQEKPTGSTKGYDRTWTPAPRGQHGHFKDDDDDDDD
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgagttctggatatggcggtggaggagggcgaagaggcagaagaggaggtcgagggaac
agagatggaagcagagaaagatgggacagaggaggcggaggaggttcaagaggacacagc
tccgactttgaccaggaccgagatggtggagggagaggcggaccacgggaccgtcctcct
ccacacctgaagggacgcgagattggcctgtggtacgcaagatacggagccgtgaggagg
aaacaggccgaccgcagatcgcgggcagtggtccagatggatgaggccagggagcagcac
attaccaagctgcttaactctgtccaaaatgatcagcctggtccttggagagacggctgg
gatgcaagagtctctacatctgacagctggcagacatctgccagtagcagtggtcattgt
tactttgacggggatctgtctgaagaggaaaagcagaagattgagttcaaatctgaggag
gaggaggaagaagttactccaggccaaaaaaaagcaactcacaaatcacaacgttacttc
tctccagcagttaaagatgagcccccagaggcgtgggatgatgaagagcagcagcagcag
gaggaggaagaggagaaagagaaactaagaagggaagacaaggacctggagttcttattg
caggaagtagccagagacagatcactggatgactgcttaaagagggatctgcagagcaag
gaatcagatccaaagtacagagaaatgctgaaattcagggaaaaactaccgtcctatggg
aaaaaagaggagctggtgcaactgatcaactcgaaccgtgtcctggtggtgagcggggaa
acggggtgcggaaaaacaactcaggtcacccagttcatcctagatgactacatcaataga
ggcgtgggctcaatgtgtcgtgtggtctgcacacagccccgtcgcatcagcgccatctcg
gtagcagagcgtgtagcagcagagagggcagaaagtgttgggaatggaaattcttgtggt
taccaaattcgcctacagagccggttaccacggagacaaggttcggtcctgtactgtaca
acgggcattattcttcagtggcttcgctcagacccattgttgtctagtatcagccacctg
gtgttggacgagatccacgagagaaacctgcaatcggacgttttgctcatcattgtgaag
aacctactcaactttcgagacgacctcaagatcgtcctcatgagtgccacgctcaacgca
gagaagttttctaaatattttgacaactgtcaaatcatccacatccctggtttgacgttc
ccagtaaaggagttcttgcttgaggacattgtggagatgaccaggtatcggtccaagaat
cgggacagtcgcccctcatggaagaaaggcttttggcaggggcgccactccagaccggag
aaggaggagaaagaggctgaatacaaggagagttggcctagttatgcacggacactgcag
gacagatactctgacaacaccattgaggcactggagatgttggacaatgatgagaagatt
gacctggagttgattgtggcgctgatccgccatattgtgctcaatgaggaggaaggagca
atcttgatcttcctgcctggctgggccgaaatcagcagtctcaatgacctgctcactgct
cagaagatgttccaatcagaccggttcgttatcatccctttgcactccctcatgccaacc
gttaatcagacgcaggtgttcaaaaagcctccaccaggaattagaaagattgtgattgct
accaatatagctgagaccagcatcaccatagatgacgttgtgtacgtgatagatggaggc
aagattaaggagacccactttgacaccaacaacaacatcagcactatgacagcagagtgg
gttagcctggccaatgccaagcagaggaaaggacgtgccggcagagtgtgtcccgggcag
tgctatcatctgtacaatggtctcagggccagcctgctggatgcctatcaattacccgaa
atcatgaggacaccgctggaggagctctgcctgcagatcaagatattgaagcttgggtct
atagctcaattcctggagaaagccctggaccctccaactgagaaggccgtcaacctagcc
atcaagaacctcatagacctgaacgccctggaccgttcagagaatctgacagcgctgggt
ttccacctggctcgtctgcctgtggagcctcacattggcaagctcatcctgtttggagct
ctgttgggttgcctcgaccccgtactcaccatcgctgcatcactcagcttcaaagaccct
ttcttcatccccctgggtaaagagaagatggcagacatgaggagaaagaccctgtccaga
aactccaagagtgaccacctcaccattgtcaacgccttccagggctgggtggaagcgaaa
cagcgtggcgccaggtatgagagggagtactgctgggacaacttcctgtctgccaataca
ctccagatgctgcacaacatgaagggtcagtttgctgagcatctaatgcgtacaggtttt
gtcagcagcagggaccctaaagaccctaagtctaacgtcaactcagacaacgagaagtta
atcaaggcagtcattgtagctggtctatacccaaaggtggccatgataagaccatctaac
agcaaaaagaggccgggggttaaggtgtacacccaggctgatggaaaggtgtgcatccac
cctaaatcagtcaatgctgaggagactcagttcaactacacatggctcatctaccacctc
aagatgagaacgagcagtatcttcctgtacgattgcactgaggtgtccccgttctcgctg
ctgttcttcggaggagacatcacaatccagaaagacgagggccaggagactatctccgtg
gaccagtggattgtcttcagatccccggcacgcatcgctcaccttgtcaagagtttaaag
aaagagctggattccctgctggaggagaaagttcgtaaccctgctcctgtaaactgggaa
aaccgtcagtccaaagactgtgctgtcatcacagccatcatagacctcatcaccacccag
gagaagcccaccggcagcactaaaggctacgacaggacgtggacacctgcccctagagga
caacacggacacttcaaggacgacgatgatgacgacgatgattaa
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