Etheostoma spectabile (orangethroat darter): 116676541
Help
Entry
116676541 CDS
T08457
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116676541 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116676541 (exosc5)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116676541 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
116676541
NCBI-ProteinID:
XP_032363473
LinkDB
All DBs
Position
3:30490501..30498167
Genome browser
AA seq
220 aa
AA seq
DB search
MMEVRGSSNVSLREFGSEQSLLSRPDGSASFIQGDTSVLAAAYGPAEVKVSKEIYDRATL
EVLIQPKVGLPSIRERAQEQCVRETCEASLLLSLHPRSSLTLILQLIHDDGSLLSCFLNA
ACVALMDAGLPMSCLFCGVTCAIDADGHIITDPTAAQEKESRALMTFAIDSTQRRVMMSS
TRGSFSVHELQQCIAVSQKASEKIFQFYRDSVRRRYSKTL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagtgcgcggctcttcaaacgtcagtctgagagagtttggcagtgaacagagc
ctcctgtcccgacctgacggttcagcttccttcatccaaggagacacaagtgtgttggct
gcagcatacggaccagccgaggtcaaagtcagtaaggaaatctatgaccgggcaaccctg
gaggtgttgatacagcccaaagtgggactgccaagcataagggagcgagcgcaagagcaa
tgtgtgcgagaaacctgtgaggcgtctctgctcttgtcccttcaccctcgctcctccctc
actctcattcttcagctgatacatgatgacggctcactcttgtcctgctttttgaacgcc
gcctgtgtggctctgatggacgcaggcctgcccatgagttgcctgttctgcggggtgacc
tgtgccatcgacgcagacggtcacatcatcacagaccccaccgcagcgcaggaaaaggaa
agtcgagctttgatgacctttgctattgactctacacaacgcagagtaatgatgtcatca
accagaggatcattttctgtccacgagctgcagcagtgtatagcagtcagtcagaaagca
tcagagaagatcttccagttctacagagactcagtccgccggcgatactccaaaaccctc
tga
DBGET
integrated database retrieval system
