KEGG   Etheostoma spectabile (orangethroat darter): 116677049
Entry
116677049         CDS       T08457                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:esp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    116677049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:esp03400]
    116677049
DNA repair and recombination proteins [BR:esp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     116677049
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EML_2 Beta-prop_IFT122_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF12 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_NUP159_NUP214 RAWUL Beta-prop_IP5PC_F WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 116677049
NCBI-ProteinID: XP_032363642
LinkDB
Position
Unknown
AA seq 607 aa
MEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKE
LVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLSMNQMGTVIVSGSTEK
VLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRX
HDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKMELDRSADPPP
AIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTTPLTPLCTQPEQVIKGGASIIQCHILN
DKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIXKRFKMVYVPNWFSVDLKTGMLT
ITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRINPMDEEENEVN
HVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWX
IDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE
SQTTSSSTNDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHFIWKSGGDLTL
HYRQKST
NT seq 1824 nt   +upstreamnt  +downstreamnt
atggagcatcatacagactgggttaatgacatagttctctgttgcaatggcaaaacattg
atatctgcctcatcagacaccacagtcaaagtatggaacgcgcataaaggcttctgtatg
tcaacgttacgaacccacaaagactatgtgaaagctctggcctacgctaaggacaaggag
cttgtggcatcagcaggtctggatcggcagatctttctttgggacgtgaacacactaaca
gcactcactgcttccaacaacactgtcaccacctcatctctcagtgggaacaaggactct
atctacagtctgtctatgaatcagatgggcacagttattgtatctggatccacagaaaag
gttctgagagtgtgggatcctcgaacatgtgcaaaactgatgaagctaaaaggccacaca
gacaacgtcaagtcgttgctgctaaatcgagatggaactcaatgcctctcgggcagctca
gacggcaccatccgcctgtggtcactcggccagcagaggtgcatcgccacctaccggntg
cacgatgaaggggtctgggccctgcaagtcaatgaggcctttacacacgtctactctgga
ggcagagacaagaagatctactgcactgacctgcgtaacccagacatccgtgtgctcatc
tgtgaggagaaggctccagtgctcaaaatggaattggacagatctgctgacccacctcca
gcaatctgggtctctaccaccaagtcatccgttaataaatggtctctaaagggaatgcac
aacttccggtcatcaggggagtacgataatgactgcactacccctctgacaccactgtgc
actcagccagaacaagtgatcaagggaggtgccagtatcatacagtgccacattctgaat
gacaagagacacatactcaccaaagataccaacaacaatgtggctttctgggatgtcctg
aaggcttgcaagggtgaagacttggggaaagtggagtttgatgaggagattnaaaagcgc
ttcaaaatggtctatgtgccaaactggttctctgttgatctgaaaactgggatgctcact
atcacattagatgagagcgactgcttcgcggcctgggtgtctgcaaaggacgctgggttt
tcaagctctgatggatctgacccaaagttgaacctgggtggactgctgcttcaggctctg
ttggagttctggccccgaactcgcatcaaccccatggacgaggaagagaacgaggtgaac
cacgtgaacggagagcaggagaacagggtccagaaaggaaatggatatttccaagtgcca
ccacacacgccagtcatctttggggaagcaggaggcagaaccctgtttaggttgctatgt
agggactcaggtggagagactgaatcgatgctgctgaacgagactgttccacagtggngt
attgatataactgtagataaaaatatgcccaaattcaacaaaatcccgttctacctccag
ccccattcttcctctggtgcaaaaactctaaagaaggaccgtctctcagccagtgacatg
ctccaggtgaggaaggtgatggagcatgtttacgagaagatcatcaacctggacaacgag
tcgcaaaccaccagctcctcaaccaacgataagccaggggagcaggagaaggaggaggac
atggcaatgctagccgaggagaagatcgaactaatgtgtcaagaccaggtgctagatccc
aacatggacctgcgaacagttaaacattttatctggaagagcggaggggacttgacgctt
cactataggcagaagtccacgtga

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