Etheostoma spectabile (orangethroat darter): 116677570
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Entry
116677570 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116677570
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116677570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
RAC_head
Motif
Other DBs
NCBI-GeneID:
116677570
NCBI-ProteinID:
XP_032363855
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MLGLALLLALQVCSGGAEGGGASVDDVSIPELSDVCTEGSCYPATGDLLIGRAHQLSSTS
TCGLNRPEPFCIVSHLQEEKKCFLCDSATPYDQLSEQMSGHRIENVVTTFAPNRLKTWWQ
SENGVENVTVQLKLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWKVYRYFAYDCETS
FPSVSHGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITDL
RVKFTKLHTLGDNLLDSRMEIKEKYYYAIFDMVVRGNCFCYGHASECAPVQGAGQATEGM
VHGHCMCNHNTKGLNCEQCQDFYHELPWRPAEGRNTNACKKCNCNQHSDSCHFDMAMFVA
SGNVSGGVCDECQHNTAGHNCEQCQPFFYQNPERDVRDPNICQPCNCDPLGSLNGGVCDG
LTDVRLGLIAGQCRCKSNVEGERCERCRPAHYGLGDTPEGCTACSCSPVGTLPGGNPCDS
ETGSCFCKRLVTGQNCDQCEAEHWGLSNDMDGCRPCDCDLGGAVNNQCDQVSGQCVCRDH
MFGRRCDQVQSGFYFIALDHYTYEAEDAKFGPGVTVVPRPHPLDRSPTWTGIGLVNVPEG
AFLEFSVDNIPHSMEYDIIIRYEPQLPDQWEEVLMTVMRPGPIRADSRCVNTVPDDDHQM
ISLHPGSRYVALPRPVCFESGLNYTIRLSLPLYSAVSDVQSPYTLIDSIVLMPHCKNLEI
FSGGSAEGESSGWETFQRYRCLDNSQSVVKSPMTEICRSFIFSISALLHQGAKECQCDPQ
GSLSTVCDPSGGQCRCRPNVVGRNCDRCSPDTFQFGPNGCRACACDPQGSQSSLCDQLTG
QCVCVSGAYGRQCERCLPGHWGFPTCRPCSCNGHASDCQADTGRCLDCRDHTTGHTCDRC
LGGYYGNPVXGSGDHCRPCMCPDAPDSSRQFAGSCSRSDDSQQAVCVCTXGFRGARCDEC
SPGYYGNPGEVGGQCQPCQCNNNIDVLDPGACDPRTGECLRCLHHSEGPACQTCRPGYYG
NALLQDCSKCSCTRLGTEPSSCPPSGDCDCERSSGRCRCLPNVTGPTCDRCAPDTWNLAS
GRGCQTCDCNAEHSYGTSCNEVSGQCSCRPGFGGRTCSECRELFWGDPEVQCHACDCDPR
GTAAPQCNPGNGQCVCVDGVSGPRCDACARGFSGSFPACRRCHRCFSDWDAVVGQLANQT
HRLVSKAHALRAGGASGPYRKSMDRLEGSAAHVRLILDKDPGEQPLGQVQDLLQQASDLT
GVLSHTLNHTEQTLVQLQEEDSAAGGKLDSVTGDAQKLERTVLDLLDQVQVIKNSNVRGA
MDSVTKYFLQSEASEARANASTLEVGGAVETSAALRRLTEDRLNRTRHEFLRRHTEHAQK
LDELAGQLQTLDQSEISHKTCGSPSSGQDPCWSSPCGGLGCVDSGGQPRCGGDGCDGVVT
QAASVWIQARDSEQELTSTMEEVEKLSRMVSEAKLKADEAKTSAQDVLLKSNRTRNQVQQ
SNEDLRGLIRQIRDFLTEDAADLESIELVANEVLAMQMPSTPAQLQNLTQEIRQRLGELD
HVEEILQQSASDIQRAQNLLDQARTASEEAAGVKDSAEKVKKSLEEAQRAQSAASSAIQQ
AAADIQSTTTLLSSVQLETADAELQLSSATQRLRRLQHGVTLLRHKGVNVSASAERTNQD
AASIRQTADELQKDLDSELTDKYTTAEKLIGLKAGGVAEARKRAESLQQEAKQLLLSASD
KLQLLKELEKSYEDNQRALDLKAEQLVQLEASVRTLLQDISSQGALYSTCLF
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgttggggctcgcgctgctgctcgctctgcaggtgtgctcaggtggcgccgaggggggc
ggggcctcagtcgatgatgtcagcatccctgagctcagtgacgtgtgcacagagggcagc
tgttacccggcaacaggagaccttctgattggccgagcccaccaactgtcgtccacctct
acctgcggattgaaccgccccgaaccattctgcattgtcagccacctgcaggaggagaag
aagtgcttcctgtgcgactcggcgactccgtacgatcagctgagtgaacagatgagcggc
catcgcatcgagaacgttgtcacaacgttcgctcccaacagactgaagacctggtggcag
tctgagaatggcgtggagaacgtcacggtgcagctgaagctggaggccgagtttcacttc
acacatctcatcatgacctttaagacgttccgtccggctgccatggtgatcgagcgatca
gctgactttgggaagacgtggaaggtttaccggtactttgcctacgactgcgagacctcg
ttcccgtcggtctcccacggtccgatgcagaaggtcgacgacgtcatctgtgactcgcgt
tactcggacatcgagccgtccaccgaaggagaggtgattttccgagtcctggacccggca
ttcaggatcgatgacccctacagcccccgaatccagaacatgttgaagatcacggacctg
cgggtgaagttcaccaagctgcacacgctgggggacaacctgctggactcccgcatggag
atcaaggagaagtactactacgccatcttcgacatggtggtccgaggaaactgcttctgc
tacggacacgcctccgagtgtgccccggtccagggagccggacaggccaccgagggcatg
gtccacggtcactgcatgtgtaaccacaacaccaaaggtctgaactgtgagcagtgtcag
gacttctaccacgagttgccatggcgaccagccgagggacgcaacaccaacgcctgcaag
aagtgtaactgtaaccagcactccgactcgtgtcatttcgacatggccatgtttgtggct
tcaggaaacgtcagcgggggggtctgtgacgagtgtcagcacaacacggccggacacaac
tgtgaacagtgtcaaccctttttctaccaaaacccagagagggacgtccgagaccccaac
atctgccagccctgtaactgcgaccccctcggctctctgaatgggggggtctgcgacggc
ctgacggacgttcggctcggtctaatcgctggtcagtgtcgctgtaaaagcaacgtggaa
ggagagcgctgcgagcgctgcagaccggcacactacgggctgggggacacgcctgaaggc
tgtacagcctgtagctgcagccccgtgggaactcttcctggaggaaatccctgcgacagt
gaaacaggaagttgcttctgtaaacgtctggtgacgggacaaaactgtgaccagtgtgag
gctgaacactggggtctcagtaacgatatggacggctgcagaccatgtgactgtgacctt
ggaggagctgtcaacaaccagtgtgatcaggtgagcggtcagtgcgtctgcagagatcac
atgttcggtcgacgctgtgatcaggtccagtctggattctacttcatcgctctggatcac
tacacctatgaggccgaggacgccaagtttggacctggagtgacggtggtgccacgaccc
caccctctggaccgcagtcccacctggacaggtatcggcctggtcaatgtcccagagggg
gccttcctggagttctccgtggacaacatcccccactccatggagtatgacatcatcatc
cgctacgaacctcagctgcccgaccaatgggaggaggttctgatgaccgtgatgagacct
ggaccaatcagagcagacagtcgctgtgtcaacacggttcccgacgacgaccaccagatg
atctcgcttcatcccggctcacggtacgtggctcttcccagaccggtttgttttgaatct
ggtctgaactacacgatccgcctcagcctgccgctgtactcggccgtcagcgacgtccag
tctccgtacacgctcattgactcgatcgtgttgatgccccactgtaagaacctggagatc
ttctcgggggggtcagcagaaggcgagtccagcgggtgggagacctttcagcgttaccgt
tgccttgacaacagccagagcgtcgtcaagtctccgatgacggagatctgcaggagcttc
atcttcagcatctccgccctgctgcaccagggggccaaagaatgccagtgtgacccccag
ggctccctgagcacggtgtgtgaccccagcgggggtcagtgccggtgtcggcccaacgtg
gtcggcaggaactgtgaccgctgttctccggacaccttccagttcggccccaacggatgc
agagcctgtgcgtgcgaccctcagggctctcagagttcgttgtgcgatcagctgactggt
cagtgtgtgtgtgtgtccggggcgtacgggcggcagtgtgagcgctgtctgccgggtcac
tggggcttccccacctgccgcccctgctcctgcaacgggcacgccagcgactgccaggcc
gacacggggcgctgcctcgactgcagggaccacaccaccgggcacacctgtgacaggtgt
ctgggtggttactatggtaacccggttnntgggtcaggtgaccactgccggccctgcatg
tgtcccgacgcccccgacagctcgcggcagtttgcaggaagctgttcccgtagcgacgac
tcccagcaggccgtctgtgtctgcaccnncggattcaggggtgctcgctgtgacgagtgc
tcccctggttactatggaaaccctggcgaggtgggggggcagtgccagccctgtcagtgc
aacaacaacatcgacgtgctggaccccggggcctgcgacccccgcaccggcgagtgtctg
cgctgcctgcaccacagcgagggccccgcctgccagacctgcaggcccggttactacggc
aacgccctgctgcaggactgcagcaagtgctcctgtacccggctgggcactgagccctcc
agctgccccccctccggggactgtgactgcgagcgcagcagcgggcggtgtcgctgcctc
cccaacgtgacggggccgacctgcgaccgctgcgcccccgacacctggaacctggccagc
ggccgcgggtgtcaaacctgcgactgcaacgccgagcactcttacgggacgtcttgcaac
gaggtcagcggtcagtgttcctgtcggcccggcttcggaggaagaacctgcagcgagtgc
agagaactgttctggggggaccccgaggtccagtgtcacgcgtgcgactgcgaccctcgg
ggcacggcggcgccccagtgtaaccctggtaacggccagtgcgtgtgcgtggacggcgtg
tcgggcccccgctgcgacgcctgcgcccgcgggttctccgggtcgttccccgcctgccgg
cgctgccaccgctgcttctccgactgggacgccgtggtcggccagctggccaatcagacg
caccgcctggtcagcaaggcacacgccctcagggccggcggcgccagcggcccctacagg
aagtccatggaccgcctggaggggagcgccgcccacgtcaggctcatcctggacaaggac
ccgggggagcaaccgctgggccaggtccaggacctgcttcagcaggccagcgacctgaca
ggggtcctgagccacacgttgaaccacacggagcagactctggttcagctgcaggaagag
gactcggctgcaggggggaaactagactctgtgacgggggacgctcagaaactggagcgc
acggtcctggatctgctggaccaggtccaggtcatcaagaactccaacgtcaggggggcg
atggacagcgtgactaagtacttcctgcagtctgaggcgtctgaagcgcgcgccaacgcc
tccaccctggaggtgggcggcgccgtggaaacctccgccgcgctacggcggctcacagag
gacaggctgaaccggaccagacacgagttcctgaggagacacactgagcatgctcagaag
ctcgatgagctggcgggacagttgcagactctggaccaatcagagatcagccacaagacc
tgcggcagtccctcctcgggtcaggacccgtgctggtcctctccctgtgggggtctgggc
tgcgtggactcgggggggcagccccggtgtgggggggacgggtgtgacggcgtggtgacg
caggccgccagcgtctggatccaagcccgggactcggaacaggaactcaccagcaccatg
gaggaggtggagaagctgtccaggatggtgtctgaagccaaactgaaagcagatgaagcg
aagaccagcgctcaggacgtcctgctgaagtccaacagaaccagaaatcaggtccagcag
agcaacgaggacctgagaggcctcatcagacagatccgggacttcctcacagaggacgct
gcagacctggagagcatcgagctcgttgctaacgaggttctggccatgcagatgcccagc
acgccggctcagctgcagaacctgacccaggagatccggcagaggctcggagagctggac
cacgtggaggagatcctgcagcagagcgcctccgacatccagagggcccagaaccttctg
gaccaggcccgcacagccagcgaggaggcggcgggtgtgaaggactctgcagagaaggtg
aagaaatctctggaagaagctcagagagctcagagcgccgcgagcagcgccatccagcag
gcagccgccgacatccagagcaccaccaccctgctctcctccgtgcagctggagacagca
gatgcagagctgcagctctctagcgccacccagaggctgcggaggctgcagcacggcgtc
acgctgctgagacacaaaggcgtcaacgtgtcagcgagcgccgagcggaccaatcaggac
gcagcgagcatcagacagacggccgacgagctgcagaaggatctggactcggagctgacg
gataagtacaccacagcggagaagctgattggtctgaaggcagggggcgtggccgaggcc
aggaagagggcggagtctctgcagcaggaagctaaacagctgctgctgtcggccagcgac
aagctgcagctgctcaaagagctggagaagtcgtacgaagacaaccagcgggctctggac
ctgaaggcggagcagctggtgcagctggaggcctccgtcaggacgctgctgcaggacatc
agcagccagggggcgctctatagcacctgtctcttctag
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integrated database retrieval system
