Etheostoma spectabile (orangethroat darter): 116678718
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Entry
116678718 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3-like
KO
K14323
protein CASC3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
esp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116678718
03015 mRNA surveillance pathway
116678718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116678718
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116678718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
116678718
NCBI-ProteinID:
XP_032364355
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MPVGPPGWSPGSDPYFSGNPQQTSHLKPFEDGFRPYSSIQFMLNSVEDHRASRSRGGREA
EQYSEEEGPAAAASEPKPXPAAAAVEPTKVEEEEEEGEVVEEEEGEDEEKEVKLEEGGQS
KEDGKAEEKENITGERQSGDSQESTDDPETKAGGKPGQKLDDDEDRKNPAYIPRKGLFFE
HDVRGHAQEEERPKGRNRKLWKDEGRWEHDRFREEEQAPKSREELIAIYGYDIRNGGGSG
DRNYRQRRPRQSASPSRDKRWRDGGERPVRSWQQSGAPNRGGAPPSSNPPSSAPPSSLPL
SSSQRGGPPSRPPPSRSRPPHHTPQSQYRNNESNAPQMHPRERQGPKAPSDPAGDRAWAA
GPGXRGPSVVIEDITFSHGGVREQDLSVATTVQSAPQRRQQQEHRGSADRAASGLAHSSS
DSTLQSPSANREASPPAERPAMERKSYSLARRTRSRPADLGSKQPSVEESAVTSGGVTAA
APPGSGGGKSWGGADDGPPSQTGGTGGLVALEKDLARISLGGQSWSQSPTSWSEMRGLPN
TMHMPGAPPPPFSGLEEMGVGSNRAKRYSSQRQRPVPEPAPPMHLGVMEGHYYEPMSYQG
PIYAHGDGPAPIPPQGMLVQPEMHIPHPGLHPHQSGGPIANPPLYGGPPVTLPPGQPQQL
LPPPFYPPPGVMTFPYPTMYPTPQGQAQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTI
KPPPPELHFATE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcggtcccccaggatggagtccaggatctgatccgtacttctctggtaacccg
caacagacatctcatttgaagcctttcgaagacgggtttcgtccgtacagctccatccag
tttatgttgaattctgtggaggaccacagagccagcaggagccgaggaggaagagaggca
gagcagtacagcgaggaagaagggccggcagcagcagccagcgagcccaaacccnccccc
gctgctgcagctgtcgaaccgacaaaggtagaggaggaggaagaggagggggaggtggtg
gaggaggaagagggggaggatgaagagaaggaggtgaagttggaggaaggaggacagagt
aaagaggacggcaaggccgaggagaaagaaaacatcaccggggagagacagagcggcgac
tcacaggagtccacggacgaccccgagaccaaggcgggggggaaaccgggtcagaagctc
gacgacgacgaggaccggaagaacccggcctacatcccgaggaagggtctgttcttcgag
cacgatgtccggggacacgctcaggaggaggagagaccgaaaggtcgaaacaggaagttg
tggaaggacgagggtcgctgggagcacgaccggttcagggaggaggagcaggcgcccaag
agccgcgaggagctcatcgccatctacggctacgacatcaggaacgggggcggctccggg
gacaggaactaccggcagcgcaggcccagacagagtgcgtctcccagcagagacaagcgc
tggagggacggaggcgagcggccggtccggtcctggcagcagagcggcgccccgaaccga
ggaggcgctccaccttcatccaacccgccgtcctccgcacccccctcgtctctccctctc
tcctcctctcagcggggcggccctccctccaggccgcctccctcccgcagccgacccccc
caccacacgcctcagtcccaatacaggaacaacgaatcaaacgcaccccagatgcacccc
agggaacgacagggccccaaagctccgtccgaccccgcgggggaccgggcctgggcagca
ggtccgggtnnccggggcccctccgtggtcattgaggatattacattcagccacggaggt
gtccgggagcaggacctgagcgttgcaacgacggtccagtcggcaccgcagagacggcag
cagcaggaacaccgcggcagcgccgatagagccgcgtccggattggctcattcctcctct
gactccaccttacagtcgccctcggccaatcgggaagcctctcctcccgccgagcggccg
gcgatggagcgtaagtcctactcgctggctcgcaggacccggtctcggcccgccgacctg
ggcagcaagcagccgtctgtggaggagtcggccgtgaccagtgggggagtgaccgccgcc
gccccccccggcagcgggggagggaagagctgggggggggcggacgacgggccgccgagc
cagacggggggcacaggggggctggtggcgctggaaaaggacttggctcgaatcagtctg
gggggacagagctggagccagagcccgacgtcctggtctgagatgagaggcctgcccaac
accatgcacatgcccggcgcgcccccccctcccttctccggcctggaggagatgggagtc
ggctccaaccgggccaaacgctactcgtcccagcggcagagacccgtccccgagccggcc
ccccccatgcacctgggggtgatggaggggcactactacgagcccatgtcgtaccaggga
ccaatctatgcccacggggacggccccgcccccatcccgccgcaaggcatgctggtccag
ccggagatgcacatcccccaccccggtctccatccccaccaatcaggcggccccatcgct
aacccccccctctacggcggcccccccgtcacgctgccgccggggcaaccgcagcagctg
ctgcctccgccgttctaccccccgccgggcgtcatgaccttcccctaccccaccatgtac
cccacgccgcagggtcaggcccaggtgacctacggaggcgtgacgtactacgacaccatg
cagcagcaggctcagcccaagccctcgcccccccgccgcacctcccagcccgtcaccatc
aagcccccccctccggagttgcacttcgccacagagtga
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