Etheostoma spectabile (orangethroat darter): 116678893
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Entry
116678893 CDS
T08457
Symbol
arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04270
Vascular smooth muscle contraction
esp04625
C-type lectin receptor signaling pathway
esp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116678893 (arhgef12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116678893 (arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
116678893 (arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116678893 (arhgef12)
Membrane trafficking [BR:
esp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116678893 (arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
116678893
NCBI-ProteinID:
XP_032364530
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All DBs
Position
3:complement(25788436..25855020)
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AA seq
1442 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDPPPDKKPKSDKTSLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLSEAESEMLGVSISSPNSPAA
ERPYSPLDRLSSPQPPWDENSSVCNQRVDMLQKLLSKEQQELQVMKEEYSRNPSPKLLKD
IQEAKKHIPQLQGQLFKATGATQEAVPSGDADDGSMFETEHVSIFKGDNSTDLSWSSTPV
SRGFGPGSPESLYPRESSFPSPKSTPRNSFNSCYSPETEDATDLDSLSPTTVSSPSSFRL
VSQIIGAEDDYFDSDQEQTNGQCNSFNSIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLY
TDFYKQTNSKETRRVFMDLHTFFIDRGANLKVAVPESISTDLDRRRTELIPEEINRLHVQ
TLQDSLLPDIQKNLEDFRQKRSMGLTVAEVELTRLDQERVRDRVALERERSYAENIIAKI
EDILLTTQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKTEK
EGEEKVKKPRFPSILGPQRRPSRIEAASVGKALDGRPRPQKQLSQPSLGASDHMEAVRLR
VSQSSEGSELTHSMPVNTSSPNSATYGSDTSRDTDMGGTPTSGPPRLSDGLQSDPLDGLP
YPASPFDLYNLDQLQEDDRESDRAHEGTPKAIRRLEGLGAADVQSEDDQGTDSEHDPPNW
QQLVGREVLAGLRSQEIKRQEVINELFYTERAHVRMLRVLDHIFYQKLAKESILPPADIK
NIFTNLDEILQLHVSILEQMAAVRKRNESSVIDQIGDDLLSWFSGGEEEKIKKAVGTFCS
NQPFALEIIKTKQKKDSRFTSFVQEAESNRLCRRLQLKDIIPVEMQRLTKYPLLLENIAK
YTDNAVEKDKVKQAADCCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILE
LKNLDLTKRTMVHEGPLSWKVNKDKTIELYTLLLQDILVLLQKQDERLILKCHSKNLAGT
ADTKHIFSPIIKLNSVLVRSVATDNKSFFVLSMSENGAQIYELMAPTVSEQRTWQRLITQ
RAEAMKVKPHSIIPLPQTDGDRDGVEIITAGVSRLSRDPDRTSTGSTQSSDKESIPAPRI
VTQTSLQGNNRFEGVKAEEEEEEEGFVDPEPPYQVAEDGKEGDSFNMFPSRADEALKTLA
ALKQVLVTQLMSQEAVEQTKRSTGARLLRTTSLRTPVDSRARLMAHNGSEKNSSPTEDPT
QDLGSGDTGFFDSPEDYAGYLVLEGYGGPGESSTDDDILASTTGKQLRTSQGCAADSGIN
LRFSSTSQAGSLSSFSRQVLSHLRNLQVNLNYLKEVEAKYNNLIRQRPERSAADTDGNKD
KR
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaaatagaaccagc
agcattctcagtaaagacccccccccagacaagaaacccaaaagtgacaaaacctcactt
ccctccaatgagtttgaccctacagaagctctggtggtacagaagagtggcagcagcagt
gtgctagcagaggggaagcctgagtcctgtggtctggtccagagatgtgtaatcatccag
aaagatgaaaatggctttgggcttactgtcagtggtgacaacccagtgtttgtgcaactt
gtcaaagaagatggggctgctatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaacgggacccttgttacacattctaatcacattgaggtggtgaagcttatcaaatcg
ggctcctatgtggccctcacagtgttggggcgtcctccagggctcgcccagatccctttg
tctgaagcggagtctgaaatgttgggcgttagcatttcctctccaaattccccagcagca
gaacgcccctacagtcctctggaccgcctctcctcccctcaaccaccatgggatgagaat
agcagtgtctgcaaccagagggttgacatgttgcaaaagttgctctcaaaagagcagcag
gagttgcaggtcatgaaggaggagtacagcaggaacccctcccccaaactactgaaagac
atccaggaagctaagaaacacattcctcagctgcagggtcagctcttcaaggccactggg
gcaacacaggaggctgttccaagtggtgatgcagatgatggtagcatgtttgagaccgag
cacgtttccatctttaagggagacaacagtacagacctgtcatggagcagcactcctgta
tctcgtggctttgggcctggatctccagagagcctgtacccaagagagtcatccttcccc
agcccaaagagcacacccaggaacagcttcaactcctgctactctccagaaacagaggac
gccactgacctggactctctctcccctaccacagttagcagtccctcttccttccgcctt
gtctcgcaaatcattggagctgaggacgactattttgattcagaccaggagcagactaat
ggacagtgtaacagctttaacagcattgagcagctcaagtctcgtccggcccacctcgca
gccttccttcaccatgttatctctcagtttgaccctgctcctgtgctgtgctacctctat
actgacttctacaagcagaccaactccaaagagaccagacgggtgttcatggaccttcac
acctttttcattgaccgtggagcaaatttgaaagttgctgttcctgaatccatctctacc
gatctcgaccggcggcggacagaactgatccctgaggaaataaacagactacatgttcaa
acactgcaggactccctgctccctgacatccagaagaaccttgaggatttcaggcagaag
cgcagtatgggcctaacggtggctgaagtagagttgaccagactggaccaagagagagtc
agagaccgtgtcgctctggagcgagagcgctcatatgctgaaaacatcatcgccaagata
gaggatatcctgttaactactcagaccacagaggaagagaaatgcactacaatgcagtat
gtcatttatacatacatgaagcaccttggtgtaagggtcaaggagcctcgcagtctggag
tccaaacgggtcaggatcaactttcttcccaagatcaagaaaagcatcaagacagagaag
gaaggagaagagaaggtgaagaaacccagatttcccagtatccttggacctcaacgtcgg
cccagccgcattgaagcagcatcagtgggtaaagccttggatggtcgtcccaggccgcag
aaacagttgtctcaaccttcgctgggggcaagtgatcacatggaagctgttcgtctaaga
gtcagccaatcgagcgagggctctgaactcacacactccatgcctgtcaacacatcatcc
ccaaacagcgccacctatggctcagacactagccgagacactgatatgggtgggactccg
acctcaggcccccccaggctgagtgacggccttcagtccgatcctcttgacgggttgcca
taccctgcttctccctttgacctttacaacctggaccaactgcaagaggatgacagagaa
agcgacagagcccatgagggaacaccaaaggccataagaaggcttgagggactgggtgct
gctgatgtccagagtgaggacgaccagggaacagactccgagcatgaccctccaaactgg
caacagctggtgggacgagaggtccttgcaggtctcaggtctcaagaaatcaagagacag
gaagtcatcaatgagctgttttatacagagcgtgcgcatgttaggatgctgagagttttg
gaccacattttctaccagaagctcgccaaagagtccatcctgcctccggcagacatcaag
aacatattcaccaacctggacgagattctacagctgcatgtttcaatactggagcaaatg
gcagccgttcggaagagaaatgagtcttctgtaattgatcagataggagacgacttgctc
tcctggttcagcggtggagaggaggagaagatcaagaaggcggtggggactttctgcagc
aaccagccttttgctctggagatcataaagaccaaacagaagaaagactcacggtttaca
tcgtttgtccaggaggcagagagtaaccgactgtgtcgccgactgcagcttaaggacatc
attcccgtagagatgcagcggctcaccaagtaccccctgctactagagaacattgccaag
tacacagacaacgcagtggagaaggacaaagtgaagcaggccgcagactgctgcagaaag
atcctcaatcacgtcaaccaggctgtgaaggaatctgaggacaagcagagattggaggac
tatcagagaagattggacctctcctctctaaagcagacagacaaccccatgatcctggag
ctgaagaatttggatttaaccaagagaacaatggtgcacgagggaccactttcatggaaa
gtgaacaaagacaagactatcgagttgtacacactcctcctgcaggacatcctggttttg
ctacagaagcaagatgagcgtctgatcctgaagtgtcacagtaaaaacctggcaggcacc
gcagataccaaacatatcttcagccccatcattaaacttaattctgtgctggtgcgctct
gtggccacagacaacaagtccttctttgtcctatccatgtcagagaacggagcccagatc
tatgagttgatggcgcccacagtttcagaacagagaacgtggcagcgtctaatcacccag
agagctgaagccatgaaagtcaaacctcacagcatcataccattacctcagactgatggg
gacagagacggtgtggagatcattacagccggtgtttccaggctgagtcgagaccccgac
cgtacatccaccggcagcacccagtcctcagacaaagagagcattccagccccaagaatt
gtgacgcagacttctctacaaggtaataatcgctttgagggagtaaaggcagaggaagag
gaggaggaggaaggttttgtggacccagagcctccttaccaagtagctgaagatggcaaa
gaaggagactcgtttaacatgtttccttccagagcagacgaagcattgaaaacattggca
gcattaaagcaggtgttggtgacccagctgatgtcccaggaggctgtagagcaaaccaaa
cgctccacgggggcacgactcctcaggaccacctctctgcggacccccgtagacagccgc
gcacgcttgatggcacacaatggctcagagaagaacagctccccgacagaggacccgact
caggacctgggctctggggacacgggcttcttcgattctcctgaagattatgcagggtat
ttagtcctggagggttacggtggcccaggggagagtagcaccgatgatgacatcttggca
tcaaccacagggaagcagctgaggacatcacaaggctgtgctgccgactccggcatcaac
ttgaggttttcttcaacgtcacaggccggcagcctctcctcgtttagcagacaggtcttg
tcccaccttagaaaccttcaggtcaacctcaactacctgaaggaggttgaggccaagtac
aataatctaatacgccaaaggccagagaggtcagcagcagacaccgatggaaacaaagat
aagagatag
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integrated database retrieval system
