KEGG   Etheostoma spectabile (orangethroat darter): 116678975
Entry
116678975         CDS       T08457                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:esp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116678975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:esp03041]
    116678975
   03036 Chromosome and associated proteins [BR:esp03036]
    116678975
Spliceosome [BR:esp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116678975
 Complex B
    116678975
 Complex C
   U2 SnRNP specific factors
    116678975
Chromosome and associated proteins [BR:esp03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    116678975
SSDB
Motif
Pfam: SF3b1 HEAT_EF3_N TOR1L1_N Menin HEAT HEAT_ECM29 GST_N_4
Other DBs
NCBI-GeneID: 116678975
NCBI-ProteinID: XP_032364602
LinkDB
Position
Unknown
AA seq 768 aa
MAKIAKTHEDIEAQILEIQGMKATLLEEGDQGVGLDSTGFYDQEIYGGSDSRFAGYVTSI
AANEQEEDEEEDSTTSLLGQKKPGYHAPVAILNAIPQSDEQYDPFAEHRPPKIAEREDEY
KARRRQMIISPERLDPFADGGKTPDPKLQVRSYVDVMLEQNLSKEEREIRQQLAEKAKSG
DLKAVNGSAASQAAAAAKRKRRWDQTADQTPTNTTPKKISTWDQADSSSETPGHTPGHTP
AHTPSSTRWDETPGRPKGSETPGATPSTRMWDPTPSHTPAGAATPGRDTPGHATPGHGGA
TGSVRKNRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDETPAS
QMGSSTPLLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDDEL
DAMFPEGYKVLPPPAGYVPIRTPARKLSATPTPIGGMTGFHMQVEDRTTKQMNDQPSGNL
PFLKPDDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAR
EFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLID
EDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSL
LPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTI
SALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIVT
NT seq 2307 nt   +upstreamnt  +downstreamnt
atggcgaagatcgccaagacgcacgaagacatcgaggcccagatcctggagatccagggg
atgaaggccaccctgctggaggagggagatcagggcgtgggcctggactccaccggcttc
tacgaccaggagatctatggaggcagcgacagccgctttgctggttacgtcacgtcaatc
gctgccaatgaacaggaggaagatgaagaagaggactcaacaacaagcttgttgggacaa
aagaagccagggtaccacgcaccagtggccatactcaacgccattcctcagtcagacgag
caatacgacccatttgcggagcatcgtccaccaaagatcgcagagcgggaagatgaatac
aaagcccggcgcagacagatgatcatctcacccgagcgtctcgacccttttgcagatggg
ggcaaaacgccggaccccaagctgcaagtcaggtcgtacgtggacgtcatgttggagcag
aacctgtcaaaagaggagagagagattcgtcagcaactggcagagaaggccaaatctggg
gacctgaaagctgtcaacgggtccgctgcctcacaagccgctgctgccgcaaaacgtaaa
cgtcgctgggaccagacagccgaccaaaccccaactaatactacgcccaaaaagatttcc
acctgggaccaggccgactcctcctctgagactccaggacacacccctggacacacccct
gcacacacaccttcaagcacccgatgggatgaaacccccggccgccccaaaggcagcgag
accccgggggccactcccagtacccgcatgtgggaccccactcccagccacacacctgct
ggcgctgccacccctggcagggacacgcccggccacgccacgcccggtcacggtggtgcc
acgggaagcgtacgcaagaaccgctgggacgaaaccccaaagacagaaagggagaccccg
ggacacgggagcggctgggcagaaacgccacgcacagacagaggagacgagtccgtcggc
gagactccgaccccaggggccagcaagaggaagtctcggtgggacgaaacccccgccagt
cagatgggttcctcaacaccactacttaccccaggaaaaacacccataggcacgccagct
atgaacatggctacccctacaccaggtcacctgatgagcatgacgccggagcagctgcag
gcgtggaggtgggagagagagattgatgagaggaaccggcctctcacagatgacgagctt
gatgccatgttcccagagggatataaggtcttgcctccaccagcaggctacgtgccgatc
cgaactccggcccgtaagctgtcggccacgcctacgcccatcggaggcatgacgggcttc
cacatgcaagtggaggaccgcaccacgaaacagatgaatgaccagccctcaggaaacctc
cccttcctcaaaccagatgacatccagtattttgacaaactgctggttgaggtggacgaa
tccacactgagccctgaggagcagaaagagagaaagatcatgaagctgctgctgaaaatt
aaaaacggaacaccgcccatgagaaaggccgctctgcgtcagatcacagataaagctcgt
gaatttggagctggccccctgttcaatcagatcctgccattactcatgtcgcccaccctg
gaggaccaggagcgtcatttgctggttaaagtcattgaccgcatcctctacaaactggat
gacctggttcgaccatacgtacacaagatcctggtggtgattgagcccctgctgattgat
gaggactactatgccagagtagaaggcagagaaatcatctccaacttggcaaaggctgcc
ggtttggctacgatgatctccacgatgcgacccgatatcgacaacatggacgagtacgtc
aggaacaccacagcccgagccttcgccgtggtggcctctgccctcggtattccctctctc
ctgccgtttctcaaagctgtgtgcaaaagcaagaagtcgtggcaggccaggcacacgggc
atcaagatcgtgcagcagatcgccatcctcatgggctgcgccattctgccccacctgcgc
agcttggtggagatcatcgaacacggtctggtggacgagcagcagaaggtgaggaccatc
agtgccctggctatagctgccctcgctgaggctgctacgccctacggtatcgaatccttt
gactcggtcctcaagccgctctggaagggtatcagacagcacagaggaaagggtctggct
gcgttcctgaaagctatcgttacctga

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