Etheostoma spectabile (orangethroat darter): 116679143
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Entry
116679143 CDS
T08457
Name
(RefSeq) nuclear receptor ROR-alpha A-like
KO
K08532
RAR-related orphan receptor alpha
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116679143
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
esp03310
]
116679143
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116679143
Nuclear receptors [BR:
esp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116679143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116679143
NCBI-ProteinID:
XP_032364727
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQRNCL
IDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQDQGPPL
LAPPSLSSPSPGEAETLSPHFVLTELSEELGGYGTLNSPGGGSVSSKADSGGGGDGRGLY
LDIQPSPDQSGLDVNGIKPEPPCDNGSNTGFFPYCSFRDGDMSPSVSTAELDHLVQTISK
SHLETCQYLTEELQQTSWQSFLQAEVESYQSKPRELMWQLCAVKITEAVQYVVEFAKRID
GFMELCQNDQIVLLKAGSLEVILVRMCRLFDSQNNSVYFDGKFAGPDVFRALGCDDLITS
VFDFANSMCSLRLSEDELAVFSAFLLLSADRSWLQEKLKVEKLQQKTQLALQHVLQKNRR
EDGALNKLRSKVSALRSLCTRHTETLSAFRAVHPDVVRTHFPPLYKELFGADLELHRDG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatttctgccatgaaagctcagattgaaatcattccctgtaagatctgt
ggagataagtcatcagggattcactacggggtgatcacctgcgagggctgcaagggtttc
ttcaggcgcagtcagcagagtaacgccgcctactcgtgtcctcgccagagaaactgtctg
atcgaccgaacgagccgcaaccgctgccagcactgccgtctgcagaagtgtctggcgctg
ggcatgtcccgggacgctgtgaagttcggtcgcatgtccaagaagcagcgggacagtttg
tacgcggaggtgcagaagcaccgcctccagcagcagcagcaggaccagggcccccccctc
ctggccccccccagcctcagcagcccgagcccgggagaggccgagaccctgtcccctcac
ttcgttctcacggagctctcagaggagctggggggctacgggaccctcaactcacctgga
ggaggatctgtctcgtcaaaggcggactctggagggggaggggacggtcgggggttgtac
ctggacatccagccgtccccggatcagtccggactcgatgttaacggcatcaaaccggag
ccgccgtgtgacaacggatccaataccggcttcttcccatactgctccttcagggacgga
gacatgtcccccagcgtgtccacggctgaactcgatcacctggtccagaccatctcaaag
tctcacctggagacgtgtcagtacctgacggaggagctgcagcagaccagctggcagagc
ttcctgcaggccgaggtggagagctaccagagcaagccgcgggagctgatgtggcagctg
tgtgccgtgaagatcaccgaggccgtccagtacgtggtggagttcgccaaacgcatcgac
ggcttcatggagctctgccaaaacgaccagatcgtcctgctgaaggccggctctctggag
gtcatcctggtccgaatgtgtcggctgttcgactcccagaacaacagcgtctacttcgac
ggcaagttcgcgggtcctgacgtcttcagagcgctcggttgtgatgacttgatcacatca
gtgtttgactttgctaacagcatgtgctcgctgcgtctctcggaggacgagctcgccgtc
ttctcagcgttcctcctgctgtctgcagaccgctcgtggctgcaggagaagctgaaggtg
gagaagctgcagcagaagactcagctggctctgcaacacgtcctgcagaaaaaccggaga
gaggacggagcgctgaacaagctcagatctaaggtgtcagcgctgcgttccctgtgcacc
cgtcacacggagacgctgtcggcgttccgggccgtccaccccgacgtggtgcggacccac
ttcccccccctctacaaggagctgttcggggccgacctggagctgcacagggacggctga
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