Etheostoma spectabile (orangethroat darter): 116679817
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Entry
116679817 CDS
T08457
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116679817
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
DSCAM family
116679817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
Sp38
fn3_2
C2-set_3
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
116679817
NCBI-ProteinID:
XP_032365170
LinkDB
All DBs
Position
3:complement(11036946..11158304)
Genome browser
AA seq
2091 aa
AA seq
DB search
MWILAFIFFQSILNVFSEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGAPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAMRGSVAVFKCIIPASVEAYVTVVSWEKDTVSLSSGQRYLITSTGA
LYILDVLPEDGLNNYRCTTRHRYTGETRQSNSARLIVSDPTNAEPGILDGFDHREVMINH
RVELPCKASGYPTPKYRWLKDNSPLEPDSRFRQTITGLLIESTQPSDSGTYVCEVWNSYG
NTEVMGRLYVKQPLKAVVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNV
RFTGLNRENLIMEGMSKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKILSSFSEKVVNP
NEPVFLVCNVKGTPPPRCSWSLDEDPVIKDSHHHLGHYETHEGHVVSQLNVTHTQVQDGG
VYRCTCSNSAGVVYHQARINVRGRASIRPMKNITAIAGRDAFVHCRVIGYPYYSIKWYKN
SALLPFNHRQRAFENNGTLKLTNVQQVDAGEYNCKVMVQPNKMDSQSVHVLVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIPISLGVTVDNIDFTSSLRISNLTP
DHNGNYTCIARNEAAAVEHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPQFQPISLNSGSRVQLLSNGSLLIKHVLEDDSGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATQGEEKRMSCIAHGEKPIMVRWEKEERIINPETSRYVVTV
KEVADEVVSTLVIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIR
MVAKNIIGNSNPSNELTITTDEAAPDGPPQDVTLESTSPQSIKVSWKPPYKYLQNGVIRG
YQVGYREYSPGGSHQFTIISLDTTGDTTESIVLDNLKKFTQYSVVVQAANRAGTGPSSQQ
VVTKTLEDVPSRAPENVLAVAKSPEVISLSWMPLPREALNGNLQGYRVIYWANLPDGELG
EIRNVTTNQPSLELDGLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPGPPAGVKAA
ASSSSVVFVSWLPPLKLNGIIRKYIVFCSNLHPMVMSEFEASPDAYFYRIPNLARNRQYS
IWVVAVTAAGHGNNSEKITVEPLAKAPARILTFNGTVTTPWMKDIVLPCKAVGDPPPTIK
WLKGNTNGTPTPVLVDGRRSVYGNGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQ
VPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYR
LENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKDHELFTSINSTRARLNLV
GWNNGGCPITSFILEYRAVDSATWTTAQRTSLTKSYILYDLQEATWYELQMKVTNSAGSA
EKRITFATLNADGSTIPPLLKTGDPISDNMSGSGGLKMVVTITSVLVVAVLVFIMLMVLK
RRRREQRLKRLRDAKSLAEMLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMET
IDDRSTVLLTDNDFGETNKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSESHHHPTA
RRTAKAGPAAARSRYASQWTLNRPHPTSSSHTLTTDWRLPTPRATGSVDKESDSYSVSPS
QDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGT
NDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMTMAVPKAHRPAGELVHLPPYLRMDFL
LNRGVPLAARGGGVSSSSGSSSSGGGGGGGAGGGGGGGGGAGAGASGVGAGASGEARGMG
GGGGGAMGQTCLEPQRSRTLKRPPPMEPTPMEVPSPREVQQWQPGTASTLPHRDVRERGE
ARGEVRAEVPSSGDLAQAQAAKLSTSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6276 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatctttttccagagcatcttgaatgttttcagtgaggaccta
cattccagcttatactttgtcaatgcatctttgcaagaggtagtatttgccagcaccaca
gggacctctgtgccctgtcctgctggtggcgcacctcctgcctcgttgcgctggtatctg
gcgaccggcgaggagatctacgatgtcccgggcatccggcacgtccaccccaatggaacc
ctccagatcttcaacttcctgccatccagcttcagcaagctgatccacgataacacgtac
tactgcactgccgagaacccctctggcaagatcaggagtcaggatgtccacatcaaagct
gtttcacgggaaccctacacagtccgagtagccgaccagaaggctatgagaggcagtgtt
gccgtcttcaagtgcattatccctgcttctgttgaggcctacgtcactgttgtatcatgg
gagaaagacacagtttcactcagctcaggacaaagatatctcatcacatccacaggagcc
ttgtatattctggatgtcctgcctgaggatgggttgaataactatcgctgcaccacacgc
caccgctacaccggtgagactcgtcagagcaacagcgcgcgtctcattgtgtcagacccc
accaatgctgagccaggcatcttggatggctttgaccaccgagaggtgatgattaatcat
cgggtggagctgccctgtaaggcttcaggctacccaacgcccaaataccgctggctgaag
gacaacagccctttggagcctgacagtcgcttccgccagaccatcacagggttgctgata
gaaagcacacagcccagtgactctgggacatacgtgtgtgaagtgtggaacagttatggc
aacactgaggtcatggggcgtctttatgtcaaacagcccttgaaggcagtggtgagccct
cggaaggtgaaaggcagtgtgggtagcaaggtgtctctgtcttgtagcgtgagcggctca
gacgagtatgagctttcatggtaccgcaacggagagatcatctaccctggtaacaatgtt
cgtttcactggactcaaccgggagaaccttataatggaggggatgtcgaagagtgacggt
ggagcataccagtgcttcgccaggaagggcaaaatgtctgcacaggactttgtgcaagtc
atccttgaagatggtactccaaagatcctgtcctccttcagtgagaaggtggtgaaccca
aacgagcccgtcttcctggtctgcaatgtcaagggcactccacctcccaggtgcagctgg
tcactggacgaagaccccgtcatcaaagacagccaccaccacctgggccactacgagacc
cacgagggccacgtcgtcagccagctcaacgtcacacacacccaggtgcaagacggcggg
gtttaccggtgcacgtgcagcaactcggccggggttgtgtaccaccaggctcgaataaac
gtaagaggccgcgccagcattcgtccaatgaaaaacatcacagcaattgctggacgagac
gcgttcgttcactgccgtgtgattggctacccttactactccataaagtggtacaaaaac
tcggcactgctaccgtttaaccaccgacagcgagcatttgagaacaacggcacactgaag
ctgaccaatgtgcagcaggtggatgctggcgagtataactgcaaggtgatggtccaaccc
aacaagatggactcccagagtgtccatgttcttgtgagagtccctccctacattcaaccc
tttgagttccagcgcttcaccatcggccagcgtgtcttcatcccctgcgtggtcatgtca
ggcgaccgcccgctagacatcacctggcaaaaagatggccggccaatccccatcagcctg
ggtgtgactgtggacaacatcgacttcaccagctcactgcgaatctccaacctgacgccc
gaccacaacggcaactacacctgcattgcccgcaacgaggctgctgcagtggagcaccag
agtcagctcattgttcgagttcctcctcagtttgtggttcagcctgaggatcaagatggg
atctatgggaaaactgtgactctgaactgctcagctgaaggctacccaccacccaccatc
gtatgggaacactccaaaggcgcgggcgtcccccagtttcagcctatctcactgaacagc
ggctctcgtgtgcagctgctgagcaatggttcgctgctaatcaaacacgtgctggaggac
gacagcggcttctacctgtgtaaggtcagcaacgacgtgggagctgatgtcagcaagtcc
atgtacctcactgtcaaaatccctgccatgatcacctcctaccccaacaccactctggct
acacagggcgaggagaagaggatgagctgcattgctcacggggagaaacccataatggtg
cgctgggagaaagaagaacgcatcatcaacccggagaccagccgatatgtggtcaccgtc
aaagaggtggctgatgaagtcgtctctacgctggtgattatgccaaccgttcgtgaggac
tctggtttcttctcctgtcatgccatcaactccttcggtgaggatcgaggcatcatacag
ctgactgtgcaagaaccacccgaccctccagaggtggagatccgggaggttaaagatcgg
accatagctctccgctggaccatgggctttgatggcaacagccccatcacaggatatgat
attgagtgcaagaacaaatcagcgtcatggctatcagcccaggtaaccaaagatgtttca
ccgcagctcaaccaggccacgattattgacctccacccttcttccacttacaacatccgc
atggtcgccaagaacatcatcggcaacagcaaccctagcaacgagctcaccatcactact
gatgaagcagctcctgacgggccaccacaggatgtcactctggagtctacctccccacag
agcatcaaagtttcctggaagcctccctacaagtacctgcagaatggtgtgattcgtggc
taccaggtgggctacagagagtatagccctggtgggagccaccagttcaccatcatcagc
ctggacaccacaggagacaccacagagagcatcgtgctggacaacctgaagaagttcact
cagtacagcgtggtggtacaggctgctaatagggcaggcaccgggccatcctcacagcaa
gtcgtcaccaaaacactagaggatgtgccgtctcgagctcctgaaaatgtcctggccgta
gcaaagtccccagaagttatctcgctctcatggatgcctctgcccagagaggctctcaat
ggaaacctgcagggataccgagtcatctactgggcaaaccttcctgatggagaactggga
gaaatcaggaatgtgacgaccaatcagccgtctctggagctggacggtttggagaagtac
accaactacagtatccaggtcttagcctttaccaacgctggagatggtgtccgcagtgaa
cagatctacgtccggactaaggaggatgttcctggtcccccagcgggggttaaggctgca
gcctccagtagctctgtggtgtttgtctcctggctgcctccgctcaaactcaacggcatc
atcaggaaatacatcgtcttctgctctaacctgcatccgatggtgatgagcgagtttgag
gcgtctccagatgcctatttctacaggatccccaatctggctcgaaacagacagtacagt
atctgggtggtggctgtgacggctgctggtcatggcaacaacagtgagaagatcacagtg
gagcctctagccaaagctcccgccaggattctgaccttcaatgggacagtgaccactcct
tggatgaaggacattgttttaccatgcaaggctgttggagaccctcctcctaccatcaag
tggctcaaggggaacacaaacggaactcctacacctgtccttgtggatggtcgtcgtagt
gtctatggcaacggcagcttcatcatccgcacagtgaaagcagaggattctgggaactac
agctgtgtggccagcaacaactggggctctgatgagatcacacttaacctgcaggtccaa
gtccctcctgaccagccacgcctcacagttaccaagactaccaccacatcaatcacattg
tcatggatacctggagataacggagggagctcaatcagaggttacatcctgcagtactca
gaggacaacagtgagcagtggggcagtttccccatcagccccagtgagcgttcataccgt
ttagagaacctgaagtgcggcacctggtataaatttaccctgacagcccagaatgcagtg
gggccagggcgcatcagtgagataattgaagctaagacccatgggaaagaaccacagttt
gccaaagaccatgaactcttcaccagcattaactccaccagggccaggctcaacctggtt
ggctggaacaacggaggctgtccaattacctccttcatactagagtaccgggcagtggac
tcggccacctggaccactgcccagcgcacatcgctgaccaagagctacatcctgtacgac
ttgcaggaggcaacctggtacgaactgcagatgaaggtcaccaacagcgctggctcagca
gaaaagagaatcacctttgctactctcaatgctgacggaagtaccatccctcccttgctg
aaaacaggagatcccatctcagacaacatgtcgggcagcgggggtctgaagatggtggtg
accatcacctctgttctcgtggtagccgtactggtctttatcatgctcatggtgctaaag
aggagacggagggagcagaggctcaagagactcagagatgccaaaagcctggcagaaatg
ctgatgagtaagaacacacggactcccgacacagtgaacaagcagcagcagacattaaga
atgcacatcgacattcccagagcccagctcctcattgaggagagggacaccatggagaca
atcgatgacaggtccactgtgctgttgacagacaatgactttggggagacaaataagcag
aaatcctccacagtgacccacacagtccactaccagtctctgtcccaggccactggacca
ctggtggacgtgtccgatgccaggcctggaaccagtgagtcccaccaccatcccactgcc
agacgcactgccaaagctggtcctgccgcggcacgcagccgctatgccagccagtggacc
ctgaaccggccgcacccaaccagctcctcacacaccctgaccaccgactggagactccct
acgccacgtgccactggatctgtggacaaggagagcgacagttacagtgtcagcccctct
caggatacagatcgtgcacgaagcagcatggtatcaacagagagtgcgtcctccacctat
gaggagctggccagagcctacgagcatgccaagatggaagagcagctccggcacgccaag
ttcaccatcaccgagtgcttcatctctgacacctcatccgaacagatgacagcagggacc
aacgactacactgacagcctgacctccagcacgccgtctgagtcgggcatctgccgcttt
accgcttcgccgcctaaacctcaggatgtcagtcgggtcatgaccatggccgtgcccaag
gcacacagacctgcaggagagctggtccacttgccgccataccttcgtatggacttcctg
ttgaaccgtggcgtgccactggcagcccgaggtggaggggtcagcagcagcagtggcagc
agcagcagtggtggaggaggtggaggaggagcaggaggaggaggcggaggtggaggagga
gcaggagcaggagcaagtggagttggtgctggtgcttcaggggaggcaagaggaatggga
ggaggtggaggaggagccatgggtcagacctgcctagaaccccagaggagccgtaccttg
aagaggccacctcccatggagcccacccccatggaagtgccatcacccagggaggtgcag
cagtggcagccaggaactgcctccaccctcccccacagggatgttcgggagaggggagag
gcccggggtgaggtccgggcagaggtcccctcctcaggagacctagcccaagcacaggct
gccaagctcagcacttcccaggagtcactgctggattccagaggacacctgaaacagagc
aacaacccctatgccaagtcttacactctggtataa
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integrated database retrieval system
