Etheostoma spectabile (orangethroat darter): 116679881
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Entry
116679881 CDS
T08457
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04142
Lysosome
esp04144
Endocytosis
esp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116679881
04142 Lysosome
116679881
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116679881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116679881
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116679881
Membrane trafficking [BR:
esp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116679881
Exosome [BR:
esp04147
]
Exosomal proteins
Proteins found in most exosomes
116679881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
116679881
NCBI-ProteinID:
XP_032365270
LinkDB
All DBs
Position
3:10731877..10759538
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVKRKNPELWASV
LLETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMM
NHPSNAWKEGQFKDIVTKVANVELYYKAVQFYLEFKPLFLNDLLIVLSPRLDHSRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRASIDAYDNFDNITLAQGL
EKHELIEFRRIAAYLFKGNNRWKXXXXLCKKDKLYKDAMQYASESKDIELAEELLAWFLN
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LEASESLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYTAAPGYGQPPQPS
FGYSM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatcctgcctatccgcttccaggagcacctacagctccagaacctgggaatc
aacccagccaacattggattcagcactcttactatggagtctgacaagttcatctgtata
agagagaaagtgggagagcaggcccaggttgtcatcattgatatggccgaccccaataat
cccatccgcaggcccatctctgcagacagcgccatcatgaaccctgccagcaaagttatt
gcccttaaagacgcggcaaaaaccctgcagatctttaacattgagatgaagagcaagatg
aaggctcacacgatgaccgatgacgtgaccttttggaagtggatctccctcaacaccgtt
gccctggtcacagacaatgcagtctaccattggagcatggagggtgattctcagccaatc
aaggtctttgaccgtcactccagcctggcaggctgccagatcatcaactaccgcactgat
gccaaacagaagtggctgctgcttattggcatttcagcacagcaaaaccgtgttgttgga
gccatgcagctgtactcagtggacaggaaagtgtctcagcccattgagggacatgccgcc
ggctttgcacagttcaagatggagggaaacactgaagagtcaaccctgttctgctttgca
gtgcgaggacaggcaggaggaaagctgcatatcattgaagtagggactccgccgactggg
aaccaaccatttccaaagaaagctgtggacgttttctttcctccagaagctcagaatgac
tttcctgttgccatgcagatcagttccaagcaagatgtagtctttctcatcaccaaatat
ggctacatccacctctatgacctggagactggaacttgtatctacatgaataggatcagt
ggggagaccatttttgtcactgccccccacgagcctactgcgggtatcattggagtcaac
aggaaaggacaggtgttgtcggtgtgcgtggaggaggaaaacatcattccctatatcacc
aatgtgctccagaacccagacctggcgctccgcatggctgtccgcaacaaccttgctgga
gctgaggagctgtttgcccgcaaattcaacaccctctttgcagcagggaattactcagaa
gctgccaaggtggcggccaatgcacccaagggtatcctgcggaccccagacaccatccgt
cggttccagagtgttccagcccaaccaggccagacgtctcccttgctccaatactttggc
atcttgctggaccaaggccaacttaataagtttgagtctctggagctgtgtaggcctgtc
ctccaacagggccgcaagcaactgttagagaaatggttgaaagaggacaagctggagtgc
tctgaggagcttggagatttggtgaagtctgtagatcctactcttgccctcagtgtctac
ctccgagccaacgtccccaataaggtcattcagtgttttgcagagactggacagttccag
aaaattgttctctatgccaagaaggtgggctacactccagactggatcttcttgctaagg
aacgtaatgcggatcagtccagagcagggacttcagttctcccagatgctggtacaggac
gaagagccacttgctgacattacacagattgttgatgtgttcatggagtacaacctgatc
cagcagtgcacatccttcctactagatgccctgaagaataacaggcccatggagggacca
ctgcagacacgcttgcttgaaatgaatttggtgcatgcaccacaggttgcagatgcaatt
ctgggcaatcagatgttcacccactatgaccgcgctcacgtggcacagctgtgtgagaag
gccggcctcctgcagagggcactggagcattatactgacctgtatgatattaagcgtgct
gtggtgcacacacaccttctcaacccagagtggttggtgaatttctttggctccttgtca
gtggaggactctctggagtgtctgagggccatgctatctgcaaacatccgccagaacctg
cagatctgtgtccaggttgcctccaagtatcatgagcagcttactactcagtccctcact
gaactttttgagtcgttcaagagctttgaaggtttgttctacttcttgggttccattgtg
aacttcagccaggatccagaggtccacttcaaatatatccaggctgcctgcaagacaggc
cagatcaaagaggtggagagaatctgccgagagagtaactgctacgaccctgaacgtgtg
aagaacttcctcaaggaagccaagctgactgaccagctgcctttgatcattgtgtgtgat
cgctttgattttgtccacgatctggtcctgtacctgtaccgcaacagcctgcagaaatac
attgagatctacgtgcagaaggtgaacccaagccgtctgccagtggtcattggaggatta
ctggatgtagattgtgctgaggatgtgattaagaacctgattttggtagttagagggcag
ttctccacggacgaactggtggctgaagtggagaaaagaaatcgactgaaactgctgctg
ccttggttagaggctcgtattcatgaaggttgtgaggagccagctacccacaacgccctg
gccaagatctacattgacagcaacaacaaccctgagcgcttcctgagggagaacccctac
tacgacagccgtgtggtcggcaagtactgcgagaaaagagacccacacctggcctgtgtg
gcctatgaaagaggacagtgtgaccaggaactgattcatgtgtgcaatgagaactcgctg
ttcaagagtctgtcccgctaccttgtaaagcgcaagaaccctgagttgtgggcgagcgtg
ctgctggagaccaacaattacagaagaccactcatcgaccaggttgtccagacagccttg
tctgagacccaggatccagaggaggtgtctgtcacagtcaaagcctttatgactgccgac
cttcccaatgagctcatcgagcttctggagaagattgtcctggataactctgtctttagc
gagcacagaaacctccaaaatctgctcatcctgacagctattaaagctgaccggacgcgt
gttatggagtacatcaaccgtctggacaactatgatgccccagacattgcgaacatcgcc
atcagtaatgagctgtttgaggaggcttttgcaatttttagaaaatttgatgtcaacacc
tctgctgtgcaggttctgattgagcacattggtaacctggaccgagcttatgagtttgcc
gagcgctgcaatgagccaccagtgtggagtcagctggcaaaggcccagctgcagaagggc
ctggtcaaagaagccattgactcttacattaaggcagatgacccttctgcttatatggag
gtgggacaagctgcagcccaaagcgggaactgggaggacctggtcaagtttttgcagatg
gctcgtaagaaggcccgtgagtcgtacgttgaaactgagttgatctttgctctggccaag
acaaaccgcctggctgagctggaagagttcattaacggacccaataatgctcacattcag
caagtgggtgaccgttgttatgacgacaaaatgtatgaggcagccaaacttctctacaac
aatgtgtccaactttggccgtctggcctccactctggtgcacctgggagagtaccaggca
gctgtggatggagctcgcaaggccaacagcacccgcacctggaaggaggtgtgttttgcg
tgtgtagatgggaaagagttccgtcttgcccagatgtgtggcctgcatattgtcgtccat
gccgatgaactggaggaactcattaactactaccaggaccgcggttactttgaggagctg
atcaccatgttggaggctgcccttggactggagcgtgctcacatgggtatgttcactgag
ctggccatcctctactcaaaattcaaaccccagaagatgagggagcacctggagctcttc
tggtcccgtgtcaacattccaaaggttctcagggcagcagagcaggcccacctctggggg
gagctagtgttcctctacgacaagtacgaggagtacgacaacgccatcatcactatgatg
aaccacccatctaatgcctggaaggagggccagttcaaggacattgtcaccaaggtggcc
aatgtggagttgtactacaaggccgtccagttttatctggagttcaaaccattgtttcta
aacgacctgctcatcgtcctctctccaagactggaccactcacgagctgtcaacttcttc
agcaaggtgaaacagctgcctctggttaaaccctacctaaggtctgtccagaatcacaac
aacaagtcagtaaatgaggcactcaacaacctcttcatcattgaggaagactatgcggca
ttgcgtgcttccatcgatgcctacgacaactttgacaatatcacactggcccagggcctg
gagaagcacgagttgattgagtttaggagaatcgcagcctaccttttcaagggcaacaac
cgctggaaannnnnnnnnnagctctgcaagaaggacaagctctacaaggatgccatgcag
tacgcatcagagtccaaagacatcgagctggcagaggagctcctggcttggttcctgaat
gaggacaagaaggaatgttttgcagcctgtttattcacctgctacgacctgctgcggccc
gacgtggtgctggagaccgcctggcgacacaacatcatggacttctccatgccatacttc
atccaggtcatgagggagtatctctctaaggttgatgcgataaaggaaaaggtggacaaa
ctcgaagcctccgagtccctgaggaaacaggaggagcaagctactgagtctcaacccatt
gtttacggcacaccccagctcatgctcacagcagggcccaacgtggctgtgcctcctcag
cagccctatggctacggttacacagcagcaccaggctacggccagcccccacagcccagc
ttcggttatagcatgtga
DBGET
integrated database retrieval system
