Etheostoma spectabile (orangethroat darter): 116683329
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Entry
116683329 CDS
T08457
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
esp04020
Calcium signaling pathway
esp04510
Focal adhesion
esp04540
Gap junction
esp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116683329 (pdgfd)
04020 Calcium signaling pathway
116683329 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116683329 (pdgfd)
04540 Gap junction
116683329 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116683329 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
esp04052
]
116683329 (pdgfd)
Cytokines and neuropeptides [BR:
esp04052
]
Cytokines
Growth factors (RTK binding)
116683329 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
116683329
NCBI-ProteinID:
XP_032365732
LinkDB
All DBs
Position
3:complement(22822033..22888711)
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AA seq
370 aa
AA seq
DB search
MSGGLVFHMWMVLLLGTITGVGRAQVSNVRVLRGNIRRDDLYRKEENITVTSAGGAIPSP
RYPNAYPRNLLLSWKLVSPPGSHIHLEFDGHFGLEEADNGVCRYDFVEVEDQSETSTIIW
GRWCGQKAPPSLNSKTNTLRVTFKSDDYFVAKPGFKVYYSLLFDCPLPASITNWEAVTVP
ILDIGAEHMPKAVTEVPFSLEDLDRTIAAFDTVEQLFRSLSPDTWRQDLDSIYTQTQIHY
RSRAYHLASRHNKVDLNRLFDDVKRYSCTPRNYSVNLREELRATNAVFFPRCLLVKRCGG
NCGCGTENWNNGCTCQASKTTLKLHEVLKYVPEVTLYERPKRLKVRWVIDEIFLTHHEKC
ECACPSQPPR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggattagttttccacatgtggatggttttattgttggggactataaccggg
gtcgggagggctcaggtctccaacgtcagagtgctgaggggcaacatcaggagagacgac
ttgtaccgcaaagaagaaaatatcacagtaacgtcagcgggtggagccatccccagtcca
cgctaccccaatgcttatccccgcaatctgctgttgtcatggaaattggtgtcaccacca
gggagccacatacacctggagtttgacggacacttcggcctggaagaggctgataatgga
gtgtgcaggtatgactttgttgaagtggaggaccaatcagagaccagcactataatttgg
ggtcgctggtgtgggcagaaggcaccgcctagtctcaactccaaaaccaacacgctcaga
gtcaccttcaagtctgacgattactttgttgcaaagccgggattcaaagtctactactca
ctgctgtttgactgtcctctgcctgcatccatcaccaactgggaggctgtcactgttcca
atattggacattggtgcagagcacatgccaaaagcagtcacagaggttcctttctcattg
gaggatttggaccggaccatagctgcctttgacacggtggaacagctgttcagatcctta
agcccagacacctggagacaggacctggacagcatctacactcaaacacaaatacattat
agatccagggcctatcatctggcaagcagacataataaagttgatctaaaccgtctcttt
gacgacgtcaagcggtacagctgtacgcctcgcaactactctgtaaacctgcgcgaggag
ctgagggccaccaatgctgttttcttccctcgatgtctcctggtcaaacgctgtggaggc
aactgtggctgtggaactgaaaactggaacaatggctgcacctgtcaagcctccaaaacg
acactcaaactacacgaggtgctgaagtacgtcccagaggtcactctgtatgagcgccct
aagaggctgaaagtgcgctgggtcatagatgagatcttcctcacacaccatgaaaagtgt
gagtgtgcgtgtccctcccagccccctcgctga
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