Etheostoma spectabile (orangethroat darter): 116683329
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Entry
116683329 CDS
T08457
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
esp04020
Calcium signaling pathway
esp04510
Focal adhesion
esp04518
Integrin signaling
esp04540
Gap junction
esp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116683329 (pdgfd)
04020 Calcium signaling pathway
116683329 (pdgfd)
09133 Signaling molecules and interaction
04518 Integrin signaling
116683329 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116683329 (pdgfd)
04540 Gap junction
116683329 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116683329 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
esp04052
]
116683329 (pdgfd)
Cytokines and neuropeptides [BR:
esp04052
]
Cytokines
Growth factors (RTK binding)
116683329 (pdgfd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
116683329
NCBI-ProteinID:
XP_032365732
LinkDB
All DBs
Position
3:complement(22822033..22888711)
Genome browser
AA seq
370 aa
AA seq
DB search
MSGGLVFHMWMVLLLGTITGVGRAQVSNVRVLRGNIRRDDLYRKEENITVTSAGGAIPSP
RYPNAYPRNLLLSWKLVSPPGSHIHLEFDGHFGLEEADNGVCRYDFVEVEDQSETSTIIW
GRWCGQKAPPSLNSKTNTLRVTFKSDDYFVAKPGFKVYYSLLFDCPLPASITNWEAVTVP
ILDIGAEHMPKAVTEVPFSLEDLDRTIAAFDTVEQLFRSLSPDTWRQDLDSIYTQTQIHY
RSRAYHLASRHNKVDLNRLFDDVKRYSCTPRNYSVNLREELRATNAVFFPRCLLVKRCGG
NCGCGTENWNNGCTCQASKTTLKLHEVLKYVPEVTLYERPKRLKVRWVIDEIFLTHHEKC
ECACPSQPPR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggattagttttccacatgtggatggttttattgttggggactataaccggg
gtcgggagggctcaggtctccaacgtcagagtgctgaggggcaacatcaggagagacgac
ttgtaccgcaaagaagaaaatatcacagtaacgtcagcgggtggagccatccccagtcca
cgctaccccaatgcttatccccgcaatctgctgttgtcatggaaattggtgtcaccacca
gggagccacatacacctggagtttgacggacacttcggcctggaagaggctgataatgga
gtgtgcaggtatgactttgttgaagtggaggaccaatcagagaccagcactataatttgg
ggtcgctggtgtgggcagaaggcaccgcctagtctcaactccaaaaccaacacgctcaga
gtcaccttcaagtctgacgattactttgttgcaaagccgggattcaaagtctactactca
ctgctgtttgactgtcctctgcctgcatccatcaccaactgggaggctgtcactgttcca
atattggacattggtgcagagcacatgccaaaagcagtcacagaggttcctttctcattg
gaggatttggaccggaccatagctgcctttgacacggtggaacagctgttcagatcctta
agcccagacacctggagacaggacctggacagcatctacactcaaacacaaatacattat
agatccagggcctatcatctggcaagcagacataataaagttgatctaaaccgtctcttt
gacgacgtcaagcggtacagctgtacgcctcgcaactactctgtaaacctgcgcgaggag
ctgagggccaccaatgctgttttcttccctcgatgtctcctggtcaaacgctgtggaggc
aactgtggctgtggaactgaaaactggaacaatggctgcacctgtcaagcctccaaaacg
acactcaaactacacgaggtgctgaagtacgtcccagaggtcactctgtatgagcgccct
aagaggctgaaagtgcgctgggtcatagatgagatcttcctcacacaccatgaaaagtgt
gagtgtgcgtgtccctcccagccccctcgctga
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