Etheostoma spectabile (orangethroat darter): 116683345
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Entry
116683345 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116683345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116683345
03036 Chromosome and associated proteins [BR:
esp03036
]
116683345
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116683345
Coactivators
SAGA/TFTC/STAGA complex
116683345
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116683345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAFH
ACL4_C
Motif
Other DBs
NCBI-GeneID:
116683345
NCBI-ProteinID:
XP_032365737
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MRLTSERSLAKMAAGSDLLDDVFFNTDVDEKVVSDLVGSLESELTGAERVNTPTRVQSVA
NHAGNSTVGNVSNSNVQGLGGSKMGLSQQELAKAGTGVQGGVINSTGSHGSSMDGAAGTT
SSTTAAQSQSKPGTASGVVTVVSDAASSIGKPGTTGVQTLNGSSVVMNCHITGGTSGANS
QPAGTLVNNGPVSVSKGSATVLSATPSTIRNSSTSAQNAVISSQSSVKSLPTVTLVRPPM
QTNTSQSGGNQTTVLTSPAVTVTSTAGSLVNKFDSTKAVMQTGAYVVASGVATGTIATMR
SPTVLQNVRTSVPSTIAATPGGIRAIAPQVLAPRLTQPQQNAPNIQNIQLPPGMVLVRSE
SGQLLVIHQQTLAQMQAQSQSQSAMTPRPAAPTSTPPVQITSLQAPGTSLLARPVTPTAI
IKQGSTVQTTVATSTTLQRXPVQQNTIMLGGTAPTPGQPLGTATTVQTGSVATAVTQRTP
VTPTAVTAETLENVKKCRNFLSTLIKLASSGKQSSETTANVKELVKNLLEAKIEPEDFTS
RLYRELNSSPQPYLVPFLKVRSLTDIMVNAACYRLCKLRPCLTCTLFTMWSFSAKCKLLP
LLDQWGDVATLLLTRVNTAHH
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcacgagcgaacgtagcttggcaaagatggcggcgggctccgatttgctggat
gatgttttcttcaacacagatgtggacgaaaaagtagttagtgatctagtcggatctctg
gagtctgaactaacgggagcagagcgtgttaacacaccgaccagggttcagtctgtagca
aatcacgctggcaactcgactgtaggtaacgttagtaattccaatgtccagggtcttgga
ggcagcaaaatgggactttcacaacaagagcttgctaaagcagggacgggagtgcaaggg
ggtgtcattaacagtacgggttcccacggttcaagcatggatggagcagccgggaccaca
tcgagcacgacagccgctcagagtcagtctaagcctgggacagctagcggagtcgttacg
gtcgtatcagatgcagcatctagtattgggaaacctggaacgactggtgttcaaacttta
aatggaagtagcgttgtgatgaactgtcatatcaccggaggtaccagcggcgccaactca
cagcccgctggcacgcttgtcaacaacggacccgtttctgtgagcaaaggaagcgcaaca
gttttgtctgcaaccccaagtactattcgaaattcttcgacgagtgcgcagaatgctgtg
atttcctctcagtcctctgtgaaaagcttacccactgtcacgcttgtgaggccacctatg
caaactaacacctcacaaagcggaggcaaccaaaccacagttttaacatcacccgctgtt
actgttaccagcacggctggctcgctcgtcaacaaattcgactccacaaaagctgtaatg
cagactggagcgtacgtcgtggcttctggtgttgcgacagggacaatagcgaccatgagg
agcccgaccgttttgcaaaacgtgaggacttcggttccgtcaacaatcgctgctactcct
ggtgggatacgagccattgctccacaggtgttggcccctcgactcactcagcctcaacaa
aacgccccaaatatccaaaacatccagctccctccaggcatggtcttggttcgcagtgag
agtgggcagctgcttgtgattcaccagcagaccttggctcagatgcaggctcagtcgcag
tcccaaagcgccatgacgccacgacctgcagcccccaccagcactccacctgtccagatc
acttcgctacaggctccaggcacgtcattactggctcgtccggttacccccaccgccatt
attaaacaaggttccacagttcagaccactgtggcaacatctaccacactgcagaggncg
cctgtacagcagaacaccatcatgctgggaggaactgctcccaccccgggacagccgctt
ggaacagccaccacagtgcagactggttctgtagcaacagcagttacacagaggacccct
gtcactccaacagctgtcacagctgagacactagagaatgtaaaaaagtgtagaaacttt
ctgtccacgttgatcaagctggcatccagtgggaaacagtcctctgagactacggccaac
gtcaaggagctggtcaagaacctgctggaagcgaagatagagcctgaagatttcaccagt
aggttgtaccgggagctcaactcctcaccacagccctaccttgtgcctttcctgaaggtg
agatcattgactgatataatggttaatgctgcatgttacaggctctgtaaactcagacct
tgtttaacatgtaccctcttcaccatgtggagcttcagtgccaaatgcaaacttctaccc
cttttagaccaatggggggatgtcgcaactctgctcctaaccagggttaacactgctcac
cactga
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