Etheostoma spectabile (orangethroat darter): 116685937
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Entry
116685937 CDS
T08457
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04120
Ubiquitin mediated proteolysis
esp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116685937 (syvn1)
04120 Ubiquitin mediated proteolysis
116685937 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116685937 (syvn1)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116685937 (syvn1)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116685937 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
116685937
NCBI-ProteinID:
XP_032366752
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MVRATLVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMGLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYLLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAPPPAPAAPANAPAA
PAANVAPGMLPGFPPGVFPFWGPFPAVPPPAAAPGATDAPRSSTEATQAAGSSPATASTA
DPAAGAAAPGSAMPGFPFSFPPPPFPSAPWLPMPPPPPFVSSMPPPPPSLSRLSEEELRE
LEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLAPPRTEGSTGEASGTDDAAS
PPAAGSGTDSPSRDRDSSSSEHVDAATVSSQPADSTSSTASGTERKEELDEGAAGAGEEV
EDGEPNAAELRRRRLRKLETPSPSSSPPPDN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcaaccttggtgactgccaccagtctggcgctgactggggctgtggtggca
catgcttacctcctcaaacaccagttctacccgactgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcctttgtgttggtgtttctgctgggaaagttc
atgaggaaggtgttttttggacagctaagggctgcagaaatggagcatctgattgagcgc
tcctggtatgctgtgactgagacgtgcttggcgttcactgtgttccgggacgacttctcc
cctcgatttgttgccctcttcacccttctgctcttccttaagtgctttcactggctggcc
gaggaccgggtggactttatggaacggagtccaaacatatcctggatttttcacttcaga
gtattatctctcatgggactgctggctgtcctggacttcctgtttgtcaaccatgcctgt
cacagcatcattacccgaggagcctcagtccagctcgtttttggatttgagtatgcaatc
ctgatgaccatggtgctcacaaccttcattaagtaccttctgcacactatcgacctccag
agtgagaatccctgggacaacaaggccgtctatatgctctacacggagctcttcacaggt
ttcatcaaagtgctcctgtacattgccttcatgaccatcatgataaaggtccacaccttc
cccctgtttgccattcggcccatgtatctggctatgaggcagttcaagaaagctgtaacg
gatgctataatgtctcggagagccatccgcaatatgaatacactgtaccctgatgctact
cctgaagatctgcaggcctcagacaacgtctgtatcatctgccgagaggaaatggtcacc
ggagccaagaaactcccttgtaatcacattttccactccagctgcctccgctcctggttc
cagaggcagcagacatgcccgacctgtcgcatggacgtcctccgtgcatctaataacaac
cagactccagccccggccccgcccccggctcctgcggccccggccaacgcccccgcagcc
ccagccgccaatgtggccccaggcatgttacccggttttcctccgggtgtcttccccttc
tggggtcccttccccgcagtgcctcctcctgctgcagctcctggtgccacggatgctccg
cgaagcagcaccgaggctacacaggcagctggttccagcccggccactgcgtcgactgca
gaccccgctgcaggtgctgctgctccaggctcagccatgccaggcttccccttctccttc
cccccgccgcccttcccctccgcaccatggctgcccatgccaccacctcctcccttcgtg
tcatcaatgcctccccctcctccgtctctgtcccggctgtccgaggaggagctgagggag
ctggaggcagaggggcggcggggcctcgaggccaggctccagtgtctccagaacatccac
accctgctggacgccgccatgctcaacatccaccactacctcagcaccgtcgccacgctt
gcccctcctcggactgagggcagcactggagaagccagcgggacagacgacgctgcttca
cctcctgcagcgggcagcggcacggacagtcccagccgggacagggactcctccagctcc
gagcatgtggacgccgctacggtctcctctcagccggccgactccacttcttctaccgct
tcgggcacggaaagaaaagaagagctggacgaaggcgcggcgggggcgggggaggaggtc
gaggacggagaacccaacgccgctgagctgaggcgccgacgccttcgcaagctcgagacg
ccctcgccctcgtcttcaccccctccggacaactga
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