KEGG   Etheostoma spectabile (orangethroat darter): 116685937
Entry
116685937         CDS       T08457                                 
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp04120  Ubiquitin mediated proteolysis
esp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:esp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116685937 (syvn1)
   04120 Ubiquitin mediated proteolysis
    116685937 (syvn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:esp04121]
    116685937 (syvn1)
Enzymes [BR:esp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116685937 (syvn1)
Ubiquitin system [BR:esp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116685937 (syvn1)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf-RING_11 zf-RING_5 zf-ANAPC11 zf-RING-like zf-HC5HC2H zf-Nse FANCL_C
Other DBs
NCBI-GeneID: 116685937
NCBI-ProteinID: XP_032366752
LinkDB
Position
Unknown
AA seq 631 aa
MVRATLVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMGLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYLLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAPPPAPAAPANAPAA
PAANVAPGMLPGFPPGVFPFWGPFPAVPPPAAAPGATDAPRSSTEATQAAGSSPATASTA
DPAAGAAAPGSAMPGFPFSFPPPPFPSAPWLPMPPPPPFVSSMPPPPPSLSRLSEEELRE
LEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLAPPRTEGSTGEASGTDDAAS
PPAAGSGTDSPSRDRDSSSSEHVDAATVSSQPADSTSSTASGTERKEELDEGAAGAGEEV
EDGEPNAAELRRRRLRKLETPSPSSSPPPDN
NT seq 1896 nt   +upstreamnt  +downstreamnt
atggtgcgagcaaccttggtgactgccaccagtctggcgctgactggggctgtggtggca
catgcttacctcctcaaacaccagttctacccgactgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcctttgtgttggtgtttctgctgggaaagttc
atgaggaaggtgttttttggacagctaagggctgcagaaatggagcatctgattgagcgc
tcctggtatgctgtgactgagacgtgcttggcgttcactgtgttccgggacgacttctcc
cctcgatttgttgccctcttcacccttctgctcttccttaagtgctttcactggctggcc
gaggaccgggtggactttatggaacggagtccaaacatatcctggatttttcacttcaga
gtattatctctcatgggactgctggctgtcctggacttcctgtttgtcaaccatgcctgt
cacagcatcattacccgaggagcctcagtccagctcgtttttggatttgagtatgcaatc
ctgatgaccatggtgctcacaaccttcattaagtaccttctgcacactatcgacctccag
agtgagaatccctgggacaacaaggccgtctatatgctctacacggagctcttcacaggt
ttcatcaaagtgctcctgtacattgccttcatgaccatcatgataaaggtccacaccttc
cccctgtttgccattcggcccatgtatctggctatgaggcagttcaagaaagctgtaacg
gatgctataatgtctcggagagccatccgcaatatgaatacactgtaccctgatgctact
cctgaagatctgcaggcctcagacaacgtctgtatcatctgccgagaggaaatggtcacc
ggagccaagaaactcccttgtaatcacattttccactccagctgcctccgctcctggttc
cagaggcagcagacatgcccgacctgtcgcatggacgtcctccgtgcatctaataacaac
cagactccagccccggccccgcccccggctcctgcggccccggccaacgcccccgcagcc
ccagccgccaatgtggccccaggcatgttacccggttttcctccgggtgtcttccccttc
tggggtcccttccccgcagtgcctcctcctgctgcagctcctggtgccacggatgctccg
cgaagcagcaccgaggctacacaggcagctggttccagcccggccactgcgtcgactgca
gaccccgctgcaggtgctgctgctccaggctcagccatgccaggcttccccttctccttc
cccccgccgcccttcccctccgcaccatggctgcccatgccaccacctcctcccttcgtg
tcatcaatgcctccccctcctccgtctctgtcccggctgtccgaggaggagctgagggag
ctggaggcagaggggcggcggggcctcgaggccaggctccagtgtctccagaacatccac
accctgctggacgccgccatgctcaacatccaccactacctcagcaccgtcgccacgctt
gcccctcctcggactgagggcagcactggagaagccagcgggacagacgacgctgcttca
cctcctgcagcgggcagcggcacggacagtcccagccgggacagggactcctccagctcc
gagcatgtggacgccgctacggtctcctctcagccggccgactccacttcttctaccgct
tcgggcacggaaagaaaagaagagctggacgaaggcgcggcgggggcgggggaggaggtc
gaggacggagaacccaacgccgctgagctgaggcgccgacgccttcgcaagctcgagacg
ccctcgccctcgtcttcaccccctccggacaactga

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