Etheostoma spectabile (orangethroat darter): 116686440
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Entry
116686440 CDS
T08457
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116686440 (smc4)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
116686440 (smc4)
Condensin II
116686440 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
APG6_N
TPR_MLP1_2
Laminin_II
HIP1_clath_bdg
THOC7
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116686440
NCBI-ProteinID:
XP_032367349
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Position
3:complement(28455986..28474254)
Genome browser
AA seq
1298 aa
AA seq
DB search
MPSKTAKSSTASTKSRGKGSQPRDDSEDELDVPPQETNSNGQEEAPPTTDPSHGEAAEAV
DNRSLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKRFSCIIG
PNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQKIIDKEGD
DYEVIPNSKFYVARTANKDNSSAYHINAKKATFKEVGALLRSHGIDLDHNRFLILQGEVE
QIAMMKPKGQTEHDEGMLEYMEDIIGSCRLKEPILTLARRIELLNEQRGEKLNRVKLVEK
EKNALEGEKNKAVQFLTLENEIFKHNSQLYQYNIHNLQKRVVDKGQEKQKILEDTKELTE
KNEKISQETEKMNQELKNVEKKQNKLNKYIETQKEKFTQLDLQDVEVREKIKHSKSKNKK
LQKQLEKDKEKLEQVRGVPASSEKAISEATACKEELEKLKVKEEKKLEEVMESLKEETSG
LQQDKETKEKELMELSKAVNETRSRMDLAQSELDIYLSRHNTALTQLNTAKQTLQTTSDT
LRERRAAIKDLEVKIPQKEQELKKDEGALEQLMKLDNETREVVREMRQKVDEAKSSLSSN
RSRGRVLDALMQQKKSGRIPGIFGRLGDLGAIDEKYDVAISSCCGALDNIVVDTIDTAQK
CVVFLKEQNIGFATFIGLDKMKVWERNMAPIRTPEDSPRLFDMVRVKDESVRPAFYFALR
DTLVAQDMEQATRMAFQKDKRWRVVTLKGQIIEMAGTMTGGGRALKGRMGSSIGTEVSQE
ELDRMESTLNEKVSKLQGCQEKRLQLEENVQRLRPELRDMKNTLEKYANSMTSLADQEAH
LKLQIKELEANVLAAAPDKAKQKQMEKSLEAFKKDYDAASSKAGKVENEVKRLHNLIVDI
NSHKLKAQQDKLDKVNKELDECSSTITKATVAIKTADRNLKKCEESVTRVQGELEDIEKS
LAELTEQLKKLEDEAGEVMKACQEAEAALPEVQEQYQAVLKEIKVLQQQEHAMQQESLSV
RLRVEQIETTIADQNLKIKHWQKEATKLSLHTIEGSPAEELPVLTATELDEIASPNVIMN
KISTLETKCAQMKPNLGAIAEYKKKEELYLQRVAQLDEITNERDQFKRGYEDLRKQRLNE
FMTGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGG
EKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNN
MFEIADRLIGIYKTHNTTKSVGINPKTIVFKEHGAITA
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaactgcaaagagctcaactgcctccaccaagtcaagagggaaagggtcg
cagcctcgggatgactccgaagacgagctggatgtaccccctcaagaaaccaactccaat
ggccaagaggaggcaccgccgacaactgatccgtctcacggggaagctgccgaggcggtt
gataatcgaagtttggaggagattctcggtagcatccctccacccccgcccccagcaatg
accaatgaaccgggcgctcctcgtctgatgataacacatttagttaatcgtaattttaaa
tcttatgcaggcgagcagattctggggccttttcacaagcgcttttcgtgcatcattggt
ccaaatgggagcgggaagtccaatgtgatagattcaatgctgtttgtgtttggatacaga
gcacaaaagattagatcgaaaaagctctcagttctgattcacagctctgataaacataag
gatgtgcaaagctgtactgtggaggtgcattttcaaaagattattgataaggaaggagat
gactacgaagtcatccccaacagcaagttctatgttgccaggactgccaacaaagacaat
tcctcagcctaccatatcaatgccaagaaagccacattcaaagaagtgggggctttactc
cgaagccatggtattgacctagaccacaacagatttctgatcttacagggtgaggtggag
cagattgccatgatgaagcctaaaggccaaacggagcatgatgagggcatgttggagtac
atggaggacattataggctcctgtcgcctcaaggagcccatcctaaccctggcccgccgc
attgagctactcaatgagcagaggggagagaagctaaaccgggtaaagctagtggaaaag
gagaagaatgctttggagggagaaaagaataaagctgtgcagttcctcaccctggagaat
gagatcttcaagcacaacagtcagctctaccaatataatattcataatctgcagaagcgt
gtggttgataaaggacaggagaagcagaagatcttggaggacaccaaggaactcactgag
aaaaatgaaaagatatcacaggaaacagagaaaatgaaccaagagctcaaaaatgtggag
aaaaagcaaaataagctcaacaagtacattgagacacagaaagagaagttcacccagctg
gacctgcaggatgttgaagtccgtgagaagattaaacactccaagagcaagaacaagaaa
ctgcaaaagcaactggaaaaagacaaagaaaagctggagcaagtgcgcggtgtacctgcc
agcagtgaaaaggccatctctgaggcaacagcttgcaaggaagagctggagaagttgaag
gtgaaagaagagaaaaaacttgaggaggtgatggagagtctgaaggaagagaccagcggc
ttgcagcaggacaaagagaccaaagagaaagagctgatggagctcagcaaggctgtaaat
gagacccgttctcgtatggacctggctcagtcggagcttgacatctaccttagccgccac
aacacagctctgacacagctcaacacggccaagcagacacttcagacaacctctgacacg
ctgcgtgagcgccgtgccgccatcaaagacctggaagtcaaaataccccagaaagagcag
gagctcaaaaaggatgagggagcactggagcagctgatgaagctggataatgagactagg
gaagtggtgagggaaatgaggcagaaggtggatgaagccaaaagctctctgtcctctaac
cgcagtcgaggaagggtcctggacgccctcatgcagcagaagaagagtggcaggatccct
ggcatctttggaagactgggagaccttggagccatagatgagaagtatgatgtggccatt
tcctcttgttgtggcgctctggataacatcgtggtggataccattgacacagctcagaaa
tgtgttgtgttcctcaaagaacagaacattgggttcgccacattcattggtcttgacaag
atgaaggtttgggagaggaacatggctcccattcgcactccagaggacagccctcgtctc
tttgacatggtgcgtgtgaaggatgagagtgtgcgacccgctttctactttgccctaagg
gacactctggtggcccaggacatggagcaggccacaaggatggccttccagaaagacaag
cgctggagagtggtcaccctgaagggacagatcattgagatggctggaaccatgactgga
ggaggaagagcattgaagggcaggatgggctcctctattggcactgaggtctcccaggag
gagcttgaccgtatggagagcacgctgaatgagaaagtttcaaagctgcagggctgccaa
gagaaaaggctgcagctagaggagaacgtccagcgcctgcgaccagagctcagagacatg
aagaacaccctggaaaaatacgccaacagcatgactagtctagctgatcaggaggctcac
ttgaaacttcagatcaaggaactggaggccaatgtgctggctgctgccccagacaaggcc
aaacagaaacagatggagaagagcctggaagcctttaagaaagactatgatgctgcgtcc
agtaaggctggcaaggtggaaaatgaggtgaaaaggctccacaacctgattgtagacatc
aatagccacaagcttaaggctcagcaggacaagcttgacaaggttaacaaggagctagat
gagtgctcctccaccataaccaaggccacagtggccataaagactgctgaccgcaacctg
aagaagtgtgaggagagtgtgacgcgtgtgcagggtgagctggaggacatcgagaagtca
ttggctgagctcaccgaacaactgaagaaactggaagacgaggccggcgaggtcatgaag
gcctgtcaggaggctgaggcggcactccccgaggtgcaggagcagtatcaggcggtgttg
aaggagataaaggtcctgcagcagcaggagcacgcaatgcagcaggagtccctcagcgtc
cggctgcgcgtcgaacagatcgagaccaccatcgctgaccaaaacctcaagatcaaacac
tggcagaaagaggccaccaagctatcccttcataccatcgagggcagtccagcagaggaa
cttcctgttctcactgctacggaacttgatgaaatcgccagtcccaacgtcattatgaac
aagatttcaacgctggagaccaagtgtgctcagatgaagcccaacctcggggccatcgct
gagtataagaagaaggaggagctgtacctgcagcgcgtggcccagctggacgagatcact
aacgagcgggaccaattcaagcgcggctacgaggacctgcgcaagcagcgcctcaatgag
ttcatgaccgggttcaacatgatcacaaacaagctgaaggagaactaccagatgctcacg
ctggggggggatgcagagctggagctcgtggacagtttagatcccttctctgagggaatc
atgttcagtgtgcgtccaccaaagaagagctggaaaaagatctttaacctgtcagggggg
gagaagaccctcagctccttggctctggtgtttgctctgcaccactacaagcccacaccg
ctctacttcatggacgagatagacgctgctctcgattttaagaacgtctccattgtggcc
tgttacatttatgagcaaacgaagaacgctcagttcatcatcatctccctgaggaacaac
atgtttgagatcgctgatcgtctcatcggcatctacaaaacccacaacaccaccaagagc
gtgggcatcaaccccaagaccatcgtgttcaaggagcacggggccatcactgcttaa
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