Etheostoma spectabile (orangethroat darter): 116686477
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Entry
116686477 CDS
T08457
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116686477 (trim59)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116686477 (trim59)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
Rootletin
zf-RING_10
MgrB
Motif
Other DBs
NCBI-GeneID:
116686477
NCBI-ProteinID:
XP_032367389
LinkDB
All DBs
Position
3:28449735..28453899
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AA seq
435 aa
AA seq
DB search
MDNVEEDLTCSVCYSLFSDPRVLPCSHTFCKTCLDNLLQASTNYSIWRPLRLPLKCPNCR
SVVELPPMGVDALPTNVCLRAIIEKYQSDSAPRPPSCQEHLRQPLNMYCIQDRQLICGLC
LTVGRHQGHPIDDLQAAFIREKPTPSLLLARLSEQRWAQVCELGEQLEQEKARCEGLVRQ
DRLEVNQFFQTLEVVLARKRHAYLEALDKAGAEVSRAYDPLIHKVKELQEEQLDLVSLGS
SVEEEDSPLVFLEQVHLFRERVEEFVKTPLPSVINLSVTPRAAEHLQQHWPAVTIGSLEE
APVPKVCCCARCGCVEAGVEAGEGADAGRGQSGSWAETLRPTSSAVLAGGLLLLLVAALW
VNPVGGASLGFSLLSQLSQLVHGLSSELVTSLWDTARSAHAVMEATAERWSSHLSSVGEK
AFQQLAALFKTLTLH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgtggaggaggacctgacgtgctctgtgtgctactcgctgttctctgatccg
cgagtcctgccgtgctcacacaccttctgtaagacctgcctggacaacctgctccaggcg
tctaccaactattccatctggcgtcccctccgcctgccgctaaaatgccccaactgccgc
agcgtggtggagctgcccccgatgggcgtagacgctctgcccaccaacgtatgcctgcgg
gccatcatcgagaaataccagagcgacagcgcgccgcgacccccttcctgtcaggagcac
ctcaggcagcctcttaacatgtactgtatccaggatcggcagctgatctgtgggctgtgt
ctgactgtcggccggcaccagggccatcccatagatgacctgcaggcggcattcatcaga
gaaaaaccgaccccgtcgctactgctggcccgactctctgagcagagatgggcacaggtg
tgtgagctgggggagcagctggagcaggagaaagcccgctgtgagggtctggtgaggcag
gaccgactggaggtcaatcagttttttcagacgctggaggtggtgctggccaggaagaga
cacgcctacctggaagccctggacaaagctggggcagaggtgtcccgggcctacgaccca
ctcattcacaaagtgaaggagctgcaggaagagcagctggacctggtgtccttgggttca
tcggtagaggaggaggactcgccgctggtcttcctggagcaggtgcatttgttccgagag
agggtggaggagtttgttaaaacccctctgccctcagtgataaacctctccgtcaccccg
cgggccgcagagcaccttcagcagcactggcccgctgtgaccatcgggagcctggaggaa
gcgcctgtccccaaggtgtgctgctgcgccagatgtggctgtgtggaggccggggtggag
gccggagagggagccgatgctggaaggggccagtccggcagctgggcggagacgttgcgg
cctacttcttccgcggtgctggcgggggggctgctgctgctgctggtggctgcgctgtgg
gtcaacccggtcgggggggcgtcgctcggtttctctctgctctcccagttgagtcagtta
gtccacggcctgagcagcgaactggtcacgtctctctgggacacggcgcgctcagcacac
gcggtgatggaggccacggcagaaagatggagctctcacctgtcctcagtgggtgagaag
gccttccagcagctggctgccttattcaaaactctgacattacactga
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