Etheostoma spectabile (orangethroat darter): 116686566
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Entry
116686566 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 4C-like
KO
K20163
DENN domain-containing protein 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116686566
Membrane trafficking [BR:
esp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116686566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
116686566
NCBI-ProteinID:
XP_032367481
LinkDB
All DBs
Position
Unknown
AA seq
1922 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINRSAGETVPEGFT
CIDSTYSGQPANLNHGSLKSPELFLCYKRGRGKCPLIDIGVLYEGKERLIQGCEIIQATP
YGRCANVNNSSATSQRIFITLRRAPPVQPQNSLAVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSNVFLCYKKSVSASNSLSYNAGLIFRYPKEDYESFPLSESVPLFCLPMGAKIEC
WAPNTPDPLPVFSTFVLTISSGEKVYGAAIQFYEPHPVDQLSEKQKIQLGLLTTVEKKVI
PNRPVNTNKCICLLSRWPFFEAFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLSQPVCTPLPLSGADYGTLLLNLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLVNSLSNLHHQLAMVSVRQPTQENSAV
DMTPIEADFTWHKKKTALEMEIQEAFLRFMASILKGYRSYLKPITQAPSEKATAADSLYD
LQGFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPSDKITD
KGTKVEGESSEDTRLLELDESQKSEHTVFVMPAEPPVGDGTEPAPRYVYKGFPRLQMELF
DGPRELLPALGSRTAGASVSSSPALLAKRTKQEIKLAYKMAKRFYSSPPEWARCLFSHCY
SLWFICLPAAVRLSKSKSRAMQQAYNVLLKMRTTEVEVLDEVCYRVVMQLCGLWGLPVMA
VRVLVEMKKAGVHPNAITYGYYNKAVLESPWPSRNRSGLFMWTKLRNVLRGVTQFKHTPD
QTSSKKGPALSTTGGSAVTDADRLSHGSADSSSEVNGGERNLFAHSHGAKDTTDNSCSTG
RQSDQGYGSKDELHQVLAEPSRTAVLSVEERNGSKAQHNGGDIAGSMDSAVALAEPPSPV
DGPSPVPSIVKLSTGSFDGGRETGTGKLFRRHSAADDVSLPDDDASLPSDGANPPQQQRQ
KSFAERSCSFSVETRAGMLLEKDVDHMASQMGADARILAAALGAGQSPPPNSGPKAIFKD
LQEEPEDDQGLTLVKLPEEDEPGAPEEEKGDDKKVERTELKMEKRKRKHTETNEEDSGLR
GPTLERADVQVGADPLSLLVTESEESASVTSQEPPRSVPAVVSRNLAEEIEMYMSLRSPL
GVKSSSMELQQAQGDSTDSPQPKQSLERRSSLPVPPVKTPTGSPGDTPKRSPATVTRSKT
FAVKTKTPGSAVGTPGIRSSSLTALVKSSQGGSLGSVINSISGIKMDTLLSGPKIDVFKS
SMKQAANVASKVWGAVASAYSYSDDEEEQAQGGGGFPSHLDEHMLAAHDMDDSPERGVIP
GLVANGLNQSCTSLGGSSSGSSDAGRGTHQTYPTPGRAGRGPDSEQGSSHHASSSSIYQN
CALEVLMSSCSQCRSCEALVYDEEIMAGWTADDSNLNTNCPFCRTAFLPLLHVEFHDLRT
ATGFYMNPSASGDSIHSTSTQPTASRSADIKTPDLISFPEEEPRETSDNLLGTHKSLIPE
PAMSDPLGLLEHEAAGKQQRSSGTSLTRSNSVGGPLQSLDYTQRPGHGVSTTSLPSSLQE
VSDGMGLNGQTPNLCPYRTQPLGAPQGSGTLLENEGDQVIYTHKFLSQHPIIFWNLVWYF
RRLDLHTHLPGLILTSEHCNKGVQLPLTSLSQDNKQVYIQLLWDNINLHQEHGEPLYLLW
RTLLEKKGTLAPTDHQEIRTLLNTIVHNIQTNDVYGPINLLIREIKRRPEGVKRQRSIYR
EILFLSLVALGKENIDVEAFDRSTAXAYDQLSAEQLKSLHRIDRPPAXQLQWCLKCFGTP
VI
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgtgtgaccgactactttgtggtggccgggctgacagac
aagtccacgcccctggagcaggacctgtcggagaccaagtccagcgggcccaaagcaccc
atcaccgacttggccgtcatcaacaggtcggcgggagaaacggtgcccgagggcttcacg
tgcatcgacagcacctacagcggccagccggccaaccttaatcacggcagtctcaagagc
cccgagctgttcctgtgctacaagaggggtcgagggaagtgtcccctcattgacatcggg
gtgctgtacgagggtaaggagcgcctgatccagggctgtgagatcatccaggccacgccg
tacggccgctgcgccaacgtcaacaacagctccgccacctcgcagcgcatcttcatcacc
ttacgccgagcgccgcccgtccagcctcagaactccctcgccgtgacggacatctgcgtt
attgtcacgagcaaaggcgagacgcccccacataccttctgcaaagtggacaagaacctc
aactgtggcatgtggggctccaacgtgttcctgtgctacaagaaatcggtctctgcatcc
aactccctcagttacaacgctggtcttatctttcgttacccaaaagaggactatgagtct
tttcctctgtcagaatctgtccccctgttttgcttacccatgggtgctaagatcgagtgt
tgggcaccaaacacaccggatcctctgcccgtcttctccacgtttgtcttaaccatctct
tccggggaaaaggtgtatggagcggccatccagttctacgagccgcatccagtggaccag
ctgagcgagaagcagaagatccagctgggcctgctcaccacggtggagaagaaggtgatc
cccaaccgtcccgtaaacaccaacaaatgcatctgcctgctctcccgctggccgttcttt
gaggccttccgcaagttcctgatgttcctctacaagctgtccgtctccggcccacacccg
ctgcctattgaaaagcacatctcacacttcatgcacaatgtgtcatttccttctcctcaa
agaccaagaatattggtccagctctcggcgcatgacaccttgatgctctcccagcccgtg
tgtacacccttacccctcagcggggccgactacggcactctgctgctgaacctgggctcg
gagaactgcgccacgctgctgcacttcgtcctgctggagagcaagatcctgctgcactcc
ctccggcccgctgtgctcaccggagtggccgaggccgtggtggctatgatcttccccttc
cagtggcagtgtccctacatccccctgtgcccgctgtctctagcaggcgtcctcaacgcc
ccatgtccattcatagtgggcgtggactcccgctactttgacctttacgaccccccgcca
gatgttgtctgcgtggatctggacaccaacactatctacctttcggacgaaaagagacac
agcaactggaagaacctcccgaagaagccctgcaagagtctggtgaactccctgagcaac
ttgcaccaccagctggccatggtttcagtacgtcaacccacacaggagaactcggcagtg
gacatgacccccatcgaggccgacttcacgtggcacaagaagaagaccgccctggagatg
gagatccaggaggccttccttcggttcatggcctccatcctgaagggctaccgctcctac
ctcaaacccatcacccaggcgccctcggaaaaggccacggcggcggactccctctacgac
ctgcaagggtttctcaaaagccgagaccgagcccaccagaagttctactcccagctcacc
aagacccagatcttcatccgcttcattgaggagtgcacctttgtcagcgacaaggacact
ggcctggcgttttttgacgactgtgtcgagaagctttttccctctgataaaatcaccgac
aagggcaccaaggtggaaggggagtcctctgaggacacgaggctgttggaactggacgag
tcccagaagagcgaacacactgtttttgtcatgcctgctgaacctccagttggcgatgga
accgaacctgcccccagatacgtctataaaggtttccccaggctgcagatggagctgttt
gacggtcctcgggagttactcccagcactcggcagcagaacagccggggccagcgtgtcc
agcagccccgcactactggctaagaggacgaagcaggagatcaagctagcatacaagatg
gctaagcgcttctactccagtcctccggagtgggcccggtgtctgttcagtcactgctac
agcctgtggttcatctgcctaccagcggccgtgcgactctccaagtccaaaagccgtgcc
atgcagcaggcgtacaacgtcctcctgaagatgaggaccactgaggtggaggtgctggat
gaggtgtgttacagagtggtgatgcagctctgtggtttgtggggtcttcctgtcatggct
gtgcgagtcctggttgagatgaagaaagccggagtacatccgaacgccatcacatacgga
tactacaacaaggccgtcttagagagcccgtggcccagcaggaaccgcagtggcctcttc
atgtggaccaagcttcgtaatgtgcttcgtggagtgacccagttcaagcacactccagac
caaacctcttccaagaagggccccgcacttagtaccacaggtgggtcagcagtcaccgac
gccgaccgcttgagtcatggaagtgccgacagctcaagtgaggtcaacggcggggaacgc
aacctgtttgcacacagccacggcgcgaaagacacaacagacaacagctgtagcacagga
aggcagtctgatcaaggctacggctccaaggatgagctgcaccaggtgctggcagagccg
tcacgtacagctgtcctttccgtggaggagagaaacggttccaaagcacagcataatgga
ggcgacattgctggctcgatggacagtgctgtagcactagcagagccccccagtcctgtt
gatggaccctccccggtccccagtattgtgaagctgtccacagggagctttgatggtggc
agggaaacgggtacagggaagctgttcaggcgacacagcgcggctgatgatgtgtctctc
cctgatgatgatgcctcgctgccgtcagatggagctaacccgcctcaacagcagcggcag
aaatccttcgctgaacgcagctgtagcttcagcgttgaaactcgcgctgggatgctccta
gagaaagacgtggaccacatggccagtcagatgggtgccgacgcccgtatcctggctgca
gcgctcggtgcaggccaaagtccaccccctaatagtgggcccaaagccatttttaaagac
ctgcaggaagagcctgaagatgatcagggcttgacactggtgaagctgccagaggaagat
gagccaggagcacctgaagaagagaagggagacgacaaaaaggtagaaaggactgagtta
aaaatggagaaacgaaaaaggaagcacactgaaacaaacgaggaggactctgggctgcga
gggccgaccctggagagggcggacgtgcaggtgggtgctgacccactttccctcctggtg
actgagagcgaagagtcggcctctgttaccagccaggagcctccgcgctccgtgcctgct
gtggtgtcccgcaacctggccgaggagatcgaaatgtacatgagcctgagaagccccctg
ggtgtgaagtcctccagcatggagctccagcaggcccagggagactccactgactcccca
cagcctaaacagtctctggaacgcaggtctagcctccccgtgccgcctgtaaaaactcca
actggctccccgggcgatacacccaaacgcagccccgccactgttacccgctccaagact
tttgcagtaaagacaaagacccccggcagcgccgtgggtaccccgggtatcagatcgtcc
tcactgaccgcgctggtcaagtcctcccagggagggtcgttgggctcggtcatcaactcc
atttcaggcatcaagatggacaccctcctgtcgggacctaagatcgatgtgtttaagtca
agcatgaaacaggcggcaaatgtagccagcaaagtgtggggagccgttgcttcagcctac
tcctactcagatgacgaggaagaacaagctcagggcggtggcggcttcccgtcccatctg
gatgagcacatgctggctgcacatgacatggatgacagcccagagagaggggtcatcccg
gggctggtggccaacggcctgaaccagagctgcaccagcctggggggcagcagcagtggc
agcagtgacgcaggccgagggacccaccagacctatccgaccccaggacgagcaggcagg
ggtccagactctgagcaaggctcctcgcatcacgcttcctcctccagcatttaccagaac
tgtgcactggaggtgctgatgtccagctgctcccagtgccgctcctgtgaagccctggtg
tacgatgaggagatcatggcaggctggacggctgatgactccaacctgaacaccaactgt
cctttctgtcgcacagccttccttcccttgttgcacgtcgagtttcatgacttacgcaca
gcgaccgggttctacatgaatcccagtgcctcaggagacagtatccacagcaccagtacc
cagcccacagccagccgctcggctgatattaagacccccgacctgatctctttccctgaa
gaggaaccaagggagacttcagataatctgcttggaacacataagagtctgattccagag
ccggcgatgtcggacccccttggtctcctggagcacgaggcagcggggaagcagcagaga
agcagtgggacgtcactgacgcgcagcaacagcgttggcggcccgctgcagagcctggac
tacacccagagacctggacatggtgtctccaccaccagcctgccctccagcctgcaggag
gtgtcggatggcatgggactaaacggccaaaccccaaacctgtgtccgtaccgtactcag
ccccttggtgctccgcaagggagcggaaccctgttggaaaacgagggagatcaggtgatc
tacacccacaagttcctcagccagcaccccatcatcttctggaacctggtttggtatttc
cgtcgcctggacctgcacactcacctacctggtctcatcctcacctccgaacactgcaac
aaaggagtacagctgccgctgacatcgctgtcccaggacaacaagcaggtgtacatccag
ctcctgtgggacaacatcaacctgcaccaggagcacggagagcccctctacctgctctgg
aggaccttgttggagaagaaggggacgttggctccgacggaccaccaggagatccgcacc
ctcctcaacacgattgttcacaacatccagaccaacgacgtgtacgggccgatcaacctg
ttgatccgagagatcaaacggcgccccgagggcgtcaaacgccagaggagtatctatcga
gaaatcctgttcctctcgctggtggccttggggaaggagaacatcgacgtggaggccttt
gaccggagtaccgccnntgcgtacgaccagctgagcgccgagcagctcaagtctttgcac
cgcatcgaccgccccccagccnnccagctccagtggtgcctgaaatgcttcgggaccccc
gtcatctga
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integrated database retrieval system
