Etheostoma spectabile (orangethroat darter): 116686597
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Entry
116686597 CDS
T08457
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03030
DNA replication
esp03410
Base excision repair
esp03420
Nucleotide excision repair
esp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116686597 (rfc4)
03410 Base excision repair
116686597 (rfc4)
03420 Nucleotide excision repair
116686597 (rfc4)
03430 Mismatch repair
116686597 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esp03032
]
116686597 (rfc4)
03036 Chromosome and associated proteins [BR:
esp03036
]
116686597 (rfc4)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116686597 (rfc4)
DNA replication proteins [BR:
esp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116686597 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
116686597 (rfc4)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116686597 (rfc4)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116686597 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
116686597 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_22
AAA_16
AAA_30
SLFN-g3_helicase
AAA_11
DUF815
Mg_chelatase
Gp44_lid
AAA_24
AAA_19
AAA_14
RuvB_N
AAA_5
Kinesin
ResIII
KH_DUF2096_C
Cdc6_lid
DNAX_ATPase_lid
AAA_28
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
116686597
NCBI-ProteinID:
XP_032367511
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MPKPNQSNQRRQREMTNQRQSRAGQAFTIPQTRICEREGGVMQAFLKGATVQTTRSQKDK
AAAGQSTEKKAKAIPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGK
TSTILAAARELYGPHLYKQRVLELNASDERGIQVVREKVKNFAQLTVAGTRPDGKQCPPF
KIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISRIIEPLTSRCSKFRFKPLAN
QIQEERLLEICEKENLKYTKESIAELVRVSEGDLRKAITFLQSAARLNVDKEITEQAVIE
IAGVVPPKMIDHLLQICFTGTFEKLEVAVRNMVDDGYAATQILSQLHETIIEQDLSDKQK
SAITEKMAVVSKCLSDGADEYLQMLSLCSVIMQHASQNN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacctaaccaatccaaccaacgaaggcaacgagaaatgaccaatcagcggcag
agtagggcgggtcaagccttcaccatcccacaaacgcgaatttgcgagcgggaaggtgga
gtcatgcaggcgtttttgaaaggagcaactgttcagactaccagatctcagaaagacaag
gcagcagcagggcaaagtacagagaagaaagccaaggctattccttgggtagaaaaatac
aggccaaagtgtgttgatgaggtggcctttcaggaggaggtagtagcagtgctgaagaag
tctctggaaggagctgatcttcccaacctgctcttctatggccctcctggaacaggaaag
acctcaactatattagctgctgccagagaactttatggtccacacctgtacaaacagagg
gtgctggagctcaatgcctctgatgaacgaggcatccaggttgtcagagagaaggtcaag
aactttgctcagctcaccgtggccgggactcgtccagatgggaagcagtgtcctcctttt
aagatcatcatcctggatgaggcggactccatgactgcaccggctcaggccgctctaagg
cggaccatggagaaggagtctcgcaccacccgtttctgcctcatctgtaattacatcagc
aggattattgagcctttgacctccagatgttccaagtttcgcttcaaacctctggccaat
cagatccaagaagagcgcctgctggagatctgtgagaaggagaacctcaagtacaccaaa
gagagtattgcagaattggtgagggtgtctgagggagacctgcggaaagccataaccttc
ctccagagtgcagcgcgtctcaacgttgacaaggagatcacagagcaagctgtcattgaa
atagccggggttgtccctcccaagatgattgaccacttgctgcaaatatgcttcacagga
acatttgagaagctagaggttgctgtcaggaacatggtggatgatggctatgcagccaca
cagatcctgagtcagctccatgagactatcatagagcaggacctgagtgacaagcagaag
tcggccattacagagaagatggcggttgtcagtaagtgcctgtcagatggtgcagatgag
tacctgcagatgttaagtctgtgttcagtcattatgcagcatgcctcccagaacaactaa
DBGET
integrated database retrieval system
