Etheostoma spectabile (orangethroat darter): 116686684
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Entry
116686684 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
esp00535
]
116686684
Proteoglycans [BR:
esp00535
]
Extracellular matrix (ECM) proteoglycans
Others
116686684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_2
DUF4959
Motif
Other DBs
NCBI-GeneID:
116686684
NCBI-ProteinID:
XP_032367611
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MQFSVRLSLCVLGFVLVSLFPQPARGQVPTPRRFRAKVLSPTELHVSWKEPKGPFDSYRV
VYTTRPGGAQKEFQVSKQEAKLLIQDFDPSKEYNFKIMAVGGGQQSKPLQAKHEAQSGVE
MVQSQRRPGGGGGAEENNEISEDEEMFSCTTSSISDIVILVDGSWSIGRINFRLVRTFLE
NLVKAFSVEFDKTRIGLAQYSGDPRIEWHLNAHTTKEAVMEAVKNLPYKGGNTLTGLALT
FILENSFKPESGARPGVPKIGILITDGKSQDDVIPPARSLRDAGIELFAIGVKNADENEL
KAIASPPQETHVYNVADFSVMSDIVDGLTKTVCERVELLDKQIRGAGQPARPPTLVEAPR
DLVTSEVTARSFRVRWTHAPGQVEKYRVVYYPASGGKPEEKVVQGTEDNVVLNYLNSLTE
YQVAVFAVYHSSASEALRGSATTLALPMVNDLELFDITHSTMRVRWKTAAGASGYMILYA
PLTEGDPADEKEVKIIXYRLVNEVELEGLTPATEYTVTVYAMYGEEASEPMTSQQTTLPL
TSARNLRFSDVDHSSARLTWDSASRKAKGYRIMYVKTNGVQTNEVDVGLVTTWLLRNLTS
LTEYTVGVFAVYDEGQAEATTDSFTTKTVPEPLGLKSSDISTDSFRVSWQHPASDVVMYR
LTWTPTDGGDSEEVLVKGNINTYLIKGLSPVSEYEVLLAALYVNEVESDEVVLVESTVKR
ATAMPTTTVTTATPRFGVRNMRIDDETTYSMRVAWQPGDSRNVRHYRLSYISAKGDRAEE
QRTVPTNQNSLILQPLLSDTEYKVSITPVYPDGDGPTAARMGRTLPLSAPRNLRLSEEWY
NRFRISWDVPPSPTMGYRVVYQPLSGNTPALETFVGEDVNTMLIVNLLSGTEYSVKVIAS
YTTGSSEALSGRAKTLPVGELTSCVPCEDERFLAPEQASPDTPATSGTIGRLAHGQKQET
KLSGGANRHCFSNLKADTRYKMSVYAQLQDGSEGPAVSVTEATLPIPTPAPTRPPTTTPL
PTIPPAKE
NT seq
3085 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcagtcagactgagcctctgcgtgctgggcttcgtcctcgtgtccctgttc
cctcagccagcacggggtcaagttccaacgccacggaggtttcgtgccaaagtcctgagc
cccaccgagctgcacgtgtcctggaaggagccgaagggaccgtttgacagctacagagtg
gtctacaccacccggcccggtggagcgcagaaggagtttcaggtgtcaaagcaggaagca
aagctgctcatccaggactttgacccctctaaagaatacaactttaagatcatggctgtc
ggtggaggacagcagagcaaacctctgcaggccaaacatgaagctcaatccggcgtcgag
atggttcagtctcagaggagacccggcggcggcggcggcgccgaggagaacaacgagatc
tcagaagatgaagagatgttttcgtgtacgacttcgtccatatccgacatcgttattctg
gtggacggctcctggagcatcggccgcatcaacttcagactcgtccggacgttcctggag
aacctggtcaaggctttctctgtagagttcgacaaaaccaggatcggcctggctcagtac
agcggagacccccggatcgagtggcatctcaacgctcacaccaccaaagaggccgtgatg
gaggccgtgaagaaccttccgtacaaaggagggaacacactgacgggtctggctctgacc
ttcatcttggagaacagcttcaaaccggagtctggagccagacccggcgttcccaagata
ggaatcctcatcacggacgggaagtcccaggacgacgtgataccccccgcgcggagcctg
agggatgctgggatagaactgtttgccatcggtgtgaagaacgccgatgagaacgagctg
aaggccatcgcctctccccctcaggagacccacgtctacaacgtggccgacttcagcgtg
atgagcgacatcgtggacggcctcaccaagaccgtgtgtgagcgcgtggagctcctggac
aagcagatccgaggtgcaggacaacctgcccgcccccccacgctcgtggaggcaccgcgt
gacctggtgacctctgaggtcacggctcggagtttccgggtgaggtggacccacgcgccg
ggccaggtggagaaataccgcgtggtctactacccagccagcggaggaaagccggaggaa
aaggtggtccaggggacagaggacaacgtggtgctgaactacctgaactctctgacggag
taccaggtggccgtcttcgccgtctaccacagctccgccagcgaggctctgagagggagc
gccaccactctggccctgccgatggtgaacgacctggagttgtttgatatcacccacagc
accatgagggtccgctggaagaccgccgccggggcttctgggtacatgatcctgtacgcc
ccgctgacggagggagaccccgcagacgagaaggaggtaaagataatataataccgactc
gtgaacgaggtggagctagagggactgactccggccacggagtacacggtgacggtttac
gccatgtacggagaggaggccagcgaacccatgaccagccagcagaccacattaccgctg
acctcggcgaggaacctgcgtttctccgacgtggaccacagctccgcccggctcacgtgg
gactctgcgtccaggaaggccaaaggctaccgcatcatgtacgtcaagaccaatggagtc
cagaccaatgaggtggatgttggccttgtgacgacctggttgctaagaaacctgacctcg
ctgacggagtacacagtcggggtctttgccgtctacgacgagggccaagccgaggccacg
accgacagcttcaccacaaagaccgtccccgaaccgctaggtctgaagagcagtgacatc
tccacagacagcttcagggtgtcttggcaacacccagcctccgatgtggtgatgtaccga
ctcacctggacgcccaccgatggaggggacagcgaagaggttctggtgaagggaaacatt
aacacctacctgataaaaggactgagccccgtctcggagtacgaagtcctcctcgctgcc
ctctacgtgaacgaggtcgagagtgacgaggtggtcctcgtagagtccacagtgaaaaga
gcgaccgcgatgcccacgacgaccgtcaccacagcgactcctcgtttcggggtgaggaac
atgaggatcgatgacgagaccacctacagcatgcgggtggcctggcagcccggggactcc
aggaacgtccgccactatcggctgagctacatcagcgccaagggggaccgagcagaggag
cagaggacggtgcccaccaatcagaacagtctgattctgcagccgttgctgtcggatacg
gagtacaaggtgtccatcacccccgtttaccccgatggagacgggcccaccgcggcgcgg
atgggacggacgcttcctctgtcggctcccaggaacctgcgtctgtcggaggaatggtac
aaccgcttcaggatcagctgggacgttccaccgtcgcccaccatgggctacagggtcgtc
taccagcccttatctggtaatacacctgctctggagaccttcgtgggcgaggacgtgaac
accatgctgatcgtcaacctgctgagcgggacggagtacagcgtcaaggtcatcgcctcc
tacaccaccgggtccagcgaggccctgtcagggagggccaagaccttacctgtgggtgag
ctaactagttgcgtaccatgtgaggatgaacggtttctcgccccggagcaagcctcgccc
gacacgcccgctacgtcgggtaccatcggacgtcttgctcacggccagaagcaggagacc
aagctgagcgggggggccaaccgccactgcttcagcaacctgaaggccgacacgcggtac
aagatgagcgtgtacgcccagctgcaggacggcagcgagggaccggccgtctccgtcacc
gaggcaacactaccgatcccgaccccggcacccaccaggccccccaccaccacgccgcta
cccacgatcccccctgccaaggaag
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