Etheostoma spectabile (orangethroat darter): 116686954
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Entry
116686954 CDS
T08457
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116686954 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116686954 (trip12)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116686954 (trip12)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
HECT type E3
116686954 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
116686954
NCBI-ProteinID:
XP_032367869
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All DBs
Position
3:complement(13497966..13543519)
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AA seq
2060 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKHKANSPPESRRPNSKASKAT
ASSATGLSRGHSSRSRSDLTVSVASFVLQDEPEAAGTSEQERPGHQSKSEGTRGLKRSEA
PDQISTFGPTPAKKPKSLPPPRDNTSETKKGPAKSKKRSLASEPPASSGRGQSKKSGAAG
ASPIQKRKKTDSLPGLSSTAGSLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSSA
STSSSSSTTGTNSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFE
WAARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFR
RSTRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGAS
ASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGA
SSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN
FDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHS
KAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQ
DKKSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRM
FSLMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICEL
MPCLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEI
SLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKED
PELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHI
ASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLSESESFLVTSPPKA
CPSGTASLCTTTISTASTTSANNATPELGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPK
RGPRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPSRT
AGVSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCTAT
EQLNLQVDGGMECLVEISNIVSESDVSSFEIQHSGLVKQLLVYLTSNTDRDLLSRDVRLK
RFLHVFAGCPVPGMEPVSRLDPTENGPYLALVHKMNSCLSQMEQFPVKVHDFPSGNGNGS
RGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIRE
EDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEE
ERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAPTKTSPRNAK
KQDELWHDGVCPSVINPLETYLTSEPPETITFDDPSLEVNLLLRVLHSISRYWFYLYDNA
VCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFY
VTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSS
RAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEATKYMFS
SRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEMS
ISSHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLGL
DFTLPGYPNIELKKGGKDFAVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLH
HLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQR
LFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIE
IMREKLLIAAREGQQSFHLS
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagttgcaggaaggttgcagtcagagcaagtcaaa
cataaagcaaattccccacctgaaagtagaagacctaattctaaggcttccaaagccacg
gccagctcagccactggtctgtccagagggcacagctcaagaagcagaagcgatcttact
gtgtccgtggcttcctttgtgttgcaagacgagccagaggctgcagggacatctgaacaa
gagcgaccaggccaccagtcaaagagtgaaggcacccgagggctgaagcgaagtgaagct
cctgaccaaattagtaccttcggaccgacccctgccaagaagcccaaatcgctcccacca
cccagagacaatacctcagagaccaagaaaggcccagctaagtccaagaagagatcactt
gcttcagaaccacctgcatcgtcaggtcgaggccagagtaagaagagcggggccgctggg
gcctcaccaattcagaaacggaagaaaacggactccctccccggtctaagcagcaccgct
gggtccctccccaatcgtaccgagggcagaactgcaaaacccaccaagctggcgtctaaa
tcggccgcctcagccaaagctgggtgtagcaacgtgacagactcctcttcctcctctgcc
tccacctcttcctcttcctccaccacaggcaccaacagcgccaccacgcagggcgcccga
gttaaacagggaaaagatcagaccaaggcacgacgctctcgctcagcctcaagcccttcc
ccccgccgtagtacccgtgacaaggagcaggccaaaacagccagctcttcaaagtttgag
tgggcagcacgcttcaaccccaaagtcaacctgccaaaacccaaactctccttgcccgga
tcctccaaaactgaaacctccaaacctgggccatcaggattacaagctaaactagcaagt
ttaaggaaatccactaagaagcgcagcgagtctcctccagcagagctccccagctttcgg
cggagcacacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggc
ctgggcaagcgcggggcagccgacgctcgccgacaggagaaaatggccgactctgacaac
aaccaggatggggccaactcgtcagctgctcgcactgatgaggcatcacaaggggcttca
gcttcaagctctgttgctggagctgtgggcatgaccacctctggagagagcgagtctgat
gactctgaaatgggaaggcttcaagccctactggaggctaggggtctccctccacatctt
tttggacccctgggcccccgcatgtcacagctgtttcacaggactattggcagtggagca
agctccaaggctcagcagctactacagggtctgcaggccacaggtgatgagtctcagcag
ctccaagctgcgattgagatgtgccagctgctggtgatgggcaatgaggaaacacttgga
ggattccctgtcaagagtgtggtgcccgctttgattacactgttacaaatggagcataac
tttgatattatgaatcatgcctctcgtgcactcacatatatgatggaggcactccctcga
tcctctgctgtggtggttgatgctattcctgtcttcctggagaagcttcaggtgatacag
ttcattgacgtagcagagcaggccctgactgccctggagatgttgtcaaggcgacacagc
aaagccattttgcaggctggtgggcttgctgactgcctcctctacctagagttctttagc
atcaatgctcagaggaatgccttggccattgcagccaactgctgtcagagcattactcca
gatgagttccactttgttgcggattctctgccactgttgactcagagactcacacaccag
gataaaaagtcagtcgaaagcacttgcctctgtttcgccagattggtagacaactttcaa
catgaggagaacctgttgcaggaggtggcgtcacgggacctgttgaccaacattcagcag
ctgctggtagtgacccctcctgttctcagctcggggatgtttatcatggttgtgcgcatg
ttttccctgatgtgctctaactgcccctgcctggcagtccagcttatgaaacagaacata
gcagaaactctacgtttcctcttgtgtggtgcatcaaatggcagctgccaggagcagatt
gaactggtaccccggagcccccaggagctctatgaactgacttccctcatatgcgagctg
atgccctgcctgcctagagagggcatctttgcagtcgatgtaatgctgaaaaagggcagt
gcccagacaacagagggagcgatctggcagtggagggatgacaggggactgtggcatcct
tacaaccgcattgacagccgcatcattgagacagcacaccagaacggggaggatgagatc
agcttgtcaaccctgggccgtgtgtacacaattgactttaactctatgcagcagattaat
gaagacacaggaactgcacgtggtatccagaggaaaccaaatcctcttgccaaccctaat
acagggagtcaccaagaggttcgtcgagaagatgcccgagctcagttgatgaaggaggac
cctgagctggcgaagtgctttatcaaaactctgtttggggtcttgtatgaagtgtacagc
tcatcggccggccctgctgtcagacacaagtgccttagagccatcctcaggatcatctac
tttgctgatgcagagctactgaaggatgtgctgaggaaccatgctgtgtccagtcacatt
gcctcaatgctatccagccaggacctaaagattgtagtgggttctctgcagatggctgag
atcctcatgcagaagctgcctgatgttttcagtgtctatttcagaagagaaggtgtgatg
caccaggtaaagaatttgtcagagtcggagagctttctagtcactagtccgccaaaggct
tgccctagtggcactgccagtttgtgcactaccaccatcagcactgcatccaccacatct
gctaataatgcaactcctgagctgggctcacccagcttccagcacagcatggacgactca
ctggacctcagcccacaggggcggttaagtgatgtcctaaagaggaaacggctacctaaa
agagggcccagaaggcccaaatactctcccccaagagatgatgataaagtagacaatcaa
gccaagagccctaccagtactcagtcacccaaatcatctttcttggccagtcttaatcct
aaaacctggggcaagctgggtgcccagaccaacaatgctaactcggagccctcacgcaca
gcgggagtgagtggtctggcaagggcacctcccaaggactcaatttcaaataacagagac
aaaataaaagcttggatcaaagaacaggcaagtaagtttgtggagcgctacttcaactct
gaaaatgtggatggcagcaaccctgcactgaatgtactccagagactttgcacagccact
gagcagctcaacctccaggtggacggtggtatggagtgcctggtggagatctccaatatt
gtatcggagtctgacgtgtcgtcttttgagatccagcacagtggactggtgaagcagctc
ctggtctacctgacctccaacactgacagagacttgctcagccgcgacgtgcggctcaag
aggttccttcatgtgtttgctggctgtccggttccaggaatggagcctgtaagtcgtctg
gacccaacagagaatggtccgtacttggcactagtgcataaaatgaacagctgtctgagc
caaatggagcagtttcctgtcaaagtgcatgatttccccagtggcaacggcaatggcagc
aggggctctcaggcattgaaattcttcaacacacatcagctcaagtgtcagctgcagaga
cacccagattgcactaatgttaaacagtggaaaggcggtcctgtgaagatagaccccctg
gccctggtgcaagccattgaaagatatctcgttgttagagggtacggccgaatcagagaa
gaggatgaagacagtgatgacgacggttcagatgatgaaatcgatgaatcactggcggca
cagttcctgaactctggcagtgtacgtcacagactacagttctacattggtgaccacctg
ctaccatacaacatgactgtataccaggctgtacggcagtacagtcttcaggcagaagaa
gaaagagagtcgacagacgatgaggcaaacccacttgggcgagctggcatctggaccaaa
actcacacaatatggtataagcctgtgagagaggacgaggacggcagcaaagacgctgtg
ggtggaaagcggggccgagcccagactgctcccaccaaaacctcacctcgtaacgccaag
aagcaggatgagctgtggcatgatggtgtgtgtcccagtgtcatcaatcccttagagaca
tacctcacttcggagccaccagagaccataacctttgatgacccctctttagaggtcaac
ctgctgctgagggtcctgcactccatcagtagatactggttttacttgtatgataatgct
gtgtgtaaggaaatcatccctaccagtgagttcattaacagtaagctgacagccaaagct
aaccgtcagctacaagacccactggtcatcatgacgggaaacatccctacttggctcatt
gagctcggaaagacgtgtcctttcttcttcccctttgacacccggcagatgctattctac
gtaactgcctttgatcgtgaccgagccatgcaacgcctactggacacaaaccctgagatc
aaccaatcagattctcaggacagcagagttgcaccgcgtcttgacaggaagaagaggacg
ataaaccgcgacgagttgctgaaacaggcagagtctgtgatgcaggacctcggcagctcc
agggcaatgttagagattcagtatgagaacgaggttggcacaggtcttggccccactctg
gagttctatgctctggtgtctcaggagctccagcgggctgatctcggcctgtggaggggc
gaagaggtcacgctggccaatcctaaaggtagccaagaggcaactaagtacatgttcagc
tccagaggactgtttgctgttcccttcggcaggacaaccaaaccagcacacatagccaaa
atcaaaatgaagttccgtttcttaggaaagctaatggcgaaagccattatggacttcaga
ttgctggacttacccctggggctgccattttataagtggatgctacggcacgagatgtcc
ataagctcccatgacctggtgaacattgaccccggtgtggcaaagtccatccagcacttg
gaggatattatccgccagaaaaagaggctggaacaggacagatcacagacgagggagacc
ctacagcaggcactggagagcctgaacatgaacggctgctcagtggaggacctgggtttg
gacttcacccttccaggataccccaacattgagctgaaaaagggcggcaaagactttgca
gtcacaatctacaacctggaggagtacctcaggttggtggtgtactggactctaaatgaa
ggggtgtccagacagtttgagtcatttagggaggggtttgagtccgtcttccccttgcat
cacctgcagtatttctacccagaggagcttgaccagttgctgtgtggtagtaaatcagag
acatgggacgtaaagacactgatggaatgctgtcgaccggaccacggctacacacatgac
agccgtgccgtacggttcctgtttgaggtgttgagcagctttgatgccgagcagcaaaga
ctttttctgcagtttgtcacaggaagccccagactacctgtcggtggtttccggagcctg
aatccccctctgacgattgtgaggaagacatttgagtcaacagagaacccggatgacttc
ctcccctcagttatgacctgtgtcaactacctgaagctgcctgactactccagcatagag
ataatgcgagagaaactgttgattgcggcccgcgagggccagcagtctttccacctttcc
tga
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