Etheostoma spectabile (orangethroat darter): 116687316
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Entry
116687316 CDS
T08457
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116687316 (lrrn1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_9
Ig_3
LRR_1
LRR_EndoS
ig
Ig_2
V-set
fn3
LRR_Zer-1
Pur_ac_phosph_N
LSR
Ig_6
Sp38
Baculo_ODV-E27
LRRCT
Ig_C17orf99
Fn3_ELFN
LRRNT
Motif
Other DBs
NCBI-GeneID:
116687316
NCBI-ProteinID:
XP_032368515
LinkDB
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Position
4:complement(27755889..27769514)
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AA seq
717 aa
AA seq
DB search
MARRRLDGLPLGQVYAGLMLVLIGLSFVQSNECPQLCVCEIRPWFTPQSTYREAITVDCN
DLRLTRIPGNLSSDTQVLLLQSNYIAKTDDELEQLFNLTELDLSQNNFSSIRDVGLTNMS
QLTTLHLEENQITEMPDYCLQDLSNLQELYINHNQINTISANAFSGLHDLLRLHLNSNKL
KTINSQWFESTPNLEILMIGENPVVGIMDFNFKPLGNLRSLVLAGMDLTDIPGNAFVGLD
NLESLSFYDNKLVQVPQRAFQKLPNLKFLDLNKNPVHKIQAGDFKNMLRLKELGINNMGE
LVSIDQYALDNLPELTKLEATNNPKFSYINRQAFRDVPALESLMLNNNALNALYQSTVDS
LPNLREISIHSNPLRCDCVIQWMSSNKTSVRFMEPPSMFCAMPTEVRGLQVREVLQNNLA
NQCLPLISHDTFPSHLNLDIGMTLDLDCRAMSQPEPEIYWVTPMGNKVMMDTISEKYSLS
SEGTLRISHIQVEDSGRYTCVAQNSEGADTRVTAVRVNGTLLDSTQLMKIYVKQTESHSI
LVSWKINSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLSVS
NIHQQTQKSCVNVTTKQATFAVEISDQGTNTALAAVMGTMFAIISLASLGVYIAKRWKRK
NYHHSLKKYMQKTSSIPLNELYPPLINLWEADSEKEKEGSSETKPSQVDTTRSYYMW
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctagacggaggttagacggcttacctctaggccaggtatatgctggcctgatgctg
gtattaataggactatccttcgtccagagcaatgagtgccctcagctgtgtgtatgcgag
atccggccatggtttacccctcagtccacctacagagaagccatcactgtggactgcaat
gaccttcgcttaacacgcatcccgggaaacctctccagtgacactcaggttctcctccta
cagagcaactacattgccaagaccgatgacgagctggagcaactcttcaacctgactgag
ctagacttgtcccagaacaacttcagtagcattcgagatgttggccttaccaatatgtcc
cagctcaccacacttcatctggaggagaatcagatcacagaaatgccagattactgtctg
caggaccttagcaacctgcaggagctctacatcaaccacaatcagatcaacaccatctct
gccaatgccttctctggtctccacgacctgctcaggcttcacctaaactccaacaagctc
aagaccatcaacagccagtggtttgaatctacgcccaacctagagatcctcatgattggg
gaaaaccctgttgttggaataatggactttaatttcaagccattgggcaaccttcgaagc
ctggttttggctgggatggatctgacagacatccctggaaatgcctttgtgggacttgac
aatcttgagagcctctctttctatgacaataagttggtccaagttcctcaaagagccttt
cagaaactgcctaacctaaagttcttggatttgaacaaaaacccggtgcacaagattcag
gcaggagattttaagaacatgctgagactgaaggagctgggtataaacaacatgggagag
ctggtttctattgaccagtacgctctggacaatcttcctgagctcacaaagctggaggct
acaaacaaccccaagttctcttacattaaccgtcaggcctttcgtgatgtcccagccttg
gagagtctaatgctgaacaacaatgccctgaatgccctgtatcaatccacagtggactct
ctgcccaacttgcgtgagatcagcatccacagcaatcctctgcgttgtgactgtgtcata
cagtggatgagctccaacaaaaccagtgtccgtttcatggaacctccatccatgttttgt
gccatgccaacagaagtaaggggtttgcaagtgcgggaggtgctacagaataatttagca
aaccagtgcctgcctctgatttcccatgatactttcccaagccacctcaaccttgacatt
ggaatgaccttggacttggactgcagagccatgtcccagcctgagcctgaaatctactgg
gtgacaccaatggggaacaaggtaatgatggacaccatatctgagaagtacagccttagc
agtgaagggacattgagaatttcccatatccaagtagaagactctggcagatacacttgt
gtggctcaaaattcagagggagctgacacaagagtgacagctgttcgggtgaatggcact
ctgttagacagcactcagctaatgaagatctacgtcaaacaaacagaatctcactctatc
ctggtctcctggaaaataaactccaatgtaatgacctctaacctcaagtggtcatctgcc
accatgaaaatagacaacccacatattacttacacagccagggtacctgttgatgtccat
gagtacaaccttacgcatttacaaccagcaactgagtacgaggtgtgcctcagcgtctcc
aacatccaccaacaaacacagaagtcgtgcgtgaatgtgacgacgaagcaagcaaccttc
gctgtggaaatatctgaccaagggaccaacactgctcttgcagcagtcatgggaacgatg
tttgcaatcatcagtctggcctctttaggagtgtatattgctaagagatggaagaggaaa
aactatcaccattctctgaaaaagtacatgcagaaaacctcatcaataccgctaaacgag
ttgtaccctcctcttatcaacttgtgggaagcagacagtgaaaaggagaaagagggctca
tccgagaccaaacccagtcaggtggacaccacacgcagctattacatgtggtga
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