Etheostoma spectabile (orangethroat darter): 116687427
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Entry
116687427 CDS
T08457
Symbol
slc6a1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116687427 (slc6a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
esp02000
]
116687427 (slc6a1)
Transporters [BR:
esp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116687427 (slc6a1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116687427
NCBI-ProteinID:
XP_032368694
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Position
4:complement(6754889..6769661)
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AA seq
605 aa
AA seq
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MATNGTKASDGHVLTETVNDAPTTTPNDKPKTLVVKVQKTKNEIPERETWVGRFDFLLSC
VGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGMPLFLLETALGQYTSIGGLGVWK
LAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTSDLPWQTCGNSWNTERCFTNY
SITDTKNLTSAVVEFWERNMHQMTDGLEKPGEIRIPLAITLAIAWVLVYFCIWKGVSWTG
KVVYFSATYPYFMLFILFCRGVTLPGAIDGILFYITPDFQKLKESEVWLDAATQIFFSYG
LGLGSLIALGSYNPFNNNVYRDSIIVCCINSFTSMFAGFVIFSIVGFMSNVTKRPIADVA
ASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPHILR
KRREIFIAIVCLISYIIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWFYGA
NKFYDNIEEMIGYRPCLWWKACWVVFTPLIVAGVFLFSAVQMVPLTLGEYVFPAWGQGVG
WCMALSSMTLIPGYMGYMFLTLKGTYKERLRIMLKPVALTKAQENAADQQTENQNQNPVN
EEAYI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacgggaccaaagcctcagacggacacgtcttaacggagacggtgaatgac
gcacccaccaccacgccgaacgacaaacccaaaaccttggtggtgaaagtgcagaagaca
aaaaatgagatacccgagagagaaacgtgggtcgggagatttgactttcttctctcttgt
gtgggatacgcaatcggactcggaaatgtctggagatttccttatttatgtggaaaaaac
ggtggaggggccttcttgattccctactttttgaccctcatatttgctggcatgcccttg
ttccttctggagacggctcttggtcagtacacttccattggagggcttggagtgtggaag
ctggctcctatgttcaaaggtgttggtctggccgctgctgttctttccttctggttaaat
atatattacattgtaatcatttcctgggctatttactatctgtacaactccttcactagt
gatctgccatggcagacgtgtggcaattcctggaacacagagcgctgcttcaccaactac
agtatcacagacaccaaaaacctcaccagcgctgtggtggagttctgggaacgtaacatg
caccagatgaccgatggtctggagaagcctggggagattaggattccactggctatcaca
ctcgccattgcatgggtgctcgtctatttctgtatctggaagggggtcagctggactggc
aaagtggtgtacttctcagctacatacccatactttatgctgttcatcctgttttgccgg
ggcgtcactctacctggtgcaattgatggaatcctcttctacatcacaccagactttcaa
aaactaaaggagtctgaggtttggctggatgctgccactcagatcttcttttcctatgga
ctgggattaggctctctgattgctcttggcagctacaatcccttcaataataatgtatac
agagattctatcattgtctgctgcatcaactccttcaccagcatgttcgctggctttgtc
atcttctccatcgtgggattcatgtccaatgtaacaaagagacccattgctgatgtggcc
gcctcaggacctggtctggcatttttggcttatcctgaggctgtgacccagctgcccatc
tctcctctctgggccatactctttttctctatgctgctaatgctgggaatcgacagccag
ttctgcactgtggaaggcttcattaccgcgctggttgatgaattccctcacattctccga
aaacgcagagagatcttcattgcaattgtttgccttatttcttacatcattggattgtcc
aacatcacccagggtggactgtacgtgttcaagctatttgactactactcagctagtgga
atgtgcctgctcttcttggtcttctttgagtgcatctcaatttcatggttttatggtgca
aacaaattctacgataacattgaggaaatgattggctacaggccctgtctgtggtggaag
gcctgctgggttgttttcactccactcattgtggctggagtcttcttgtttagtgcagtg
cagatggttcccctcaccttgggtgaatatgttttcccagcctggggccagggggttggg
tggtgcatggccctctcctccatgacactcatccctggctacatgggctacatgttcctc
acactcaaaggcacatacaaagagcgcctgcggattatgttgaagcctgtggcactgacg
aaggcacaagaaaatgccgcagaccagcagacagaaaaccagaatcagaaccctgtcaac
gaggaagcctacatctag
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