Etheostoma spectabile (orangethroat darter): 116687566
Help
Entry
116687566 CDS
T08457
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116687566 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116687566 (irf6)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116687566 (irf6)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116687566 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
116687566
NCBI-ProteinID:
XP_032368925
LinkDB
All DBs
Position
4:20066273..20070224
Genome browser
AA seq
487 aa
AA seq
DB search
MSVTPRRVRLKPWLVAQVDSGRYPGLVWIDREAMRFTIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDVCEIPQPL
SNQGSSDAGSWTPHEEDGGEEDIPDTPESLPPYPSNGTSPSPQIMWSPMTPESSMQPSSC
PPSNGVWPKEERVKIWPKEEPVDVEMHPTPPAPLPDHSMQPPPLPDAMFASPEMWISSLP
MTDLEVQFLYRGKEMCPTANVSNPQGCRLFYGDLGPMVNQEELFGPVNLEQLRFPTTEHI
TNDKQRIFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPTAPNLIERQRK
VKLFCLESFLSGVITHQRNQTSTPPHFEINLCFGEEWPDGRPKERKLIMVQIVPVVARMI
SEMFSGDNTRSFDSGSVRLQISIPDIKDNIVTHLKQLYCLLQTHQGQDGWALPPSSGLNI
VQALQAQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcacccctcgacgtgtccgtctgaagccctggctggtcgctcaggtggacagc
gggcggtacccgggtctggtgtggattgaccgtgaggccatgcgcttcacgatcccatgg
aaacacgctacacgacacacaccccagcacgaggacgaggacaccatatttaaggcgtgg
gctgtggagaccgggaagttccaagagggagttgatgaacctgatcctgcaaagtggaaa
gctcagcttagatgtgccctgaacaaaagtcgagaatttaacctggtctatgatggcacc
aaagaggtccccatgaatcctttgaagatatatgatgtctgtgaaatcccacagcccctc
agcaaccaaggctcctcagacgctggttcatggactccgcatgaggaagatggtggtgag
gaagatattccagatacaccagagtctctccctccatacccatccaatggcaccagtccc
tcccctcaaattatgtggtctcccatgaccccagagtcctccatgcagccttctagttgt
cccccttctaatggggtctggcccaaagaggagcgtgttaaaatctggcctaaagaggag
cctgtggatgtggagatgcaccccacacctcctgctcctctgcctgatcactcaatgcag
ccccctcctctacctgacgccatgtttgcctctccagaaatgtggatcagttccctcccg
atgacggacctggaggtacagttcctgtacagagggaaggagatgtgtcccaccgcgaac
gtcagtaacccgcagggctgcaggctgttctacggagacctcggccccatggtcaaccaa
gaggagctgtttgggccggtgaacctggaacagctgcgctttcccaccacagagcacatt
accaacgacaagcaaaggattttcactaaccgcctgctggacgtgatggacagaggccta
atcctggaggtcagtggtcacgatatctatgcagtgcgtctctgccagtgcaaggtgtac
tggtcgggtccttgtgctccaaatccaactgctccaaatcttatagagcgccagaggaag
gtcaaactcttttgcttggagtcttttctcagtggagtgataacccaccagcgcaaccag
acatcaacccctcctcactttgaaatcaacctgtgttttggagaggagtggcctgatggg
aggcccaaagagaggaaacttatcatggttcagattgttccagtggtggcccgtatgata
agcgagatgttttctggagacaacacgcgatccttcgacagcggcagtgttcgcctgcag
atctcaatcccagatattaaagacaacatagtgacccacctaaagcagctgtactgcctg
ctacagacccaccagggccaggacggctgggcgttacctcccagctcaggcctgaacatc
gtccaggctctgcaggcacagtga
DBGET
integrated database retrieval system
