Etheostoma spectabile (orangethroat darter): 116687620
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Entry
116687620 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: parapinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
esp04030
]
116687620
G protein-coupled receptors [BR:
esp04030
]
Rhodopsin family
Vision
Opsin
116687620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Srg
7TM_GPCR_Srv
7TM_GPCR_Srx
7tm_4
TAS2R
7TM_GPCR_Srbc
Motif
Other DBs
NCBI-GeneID:
116687620
NCBI-ProteinID:
XP_032369018
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Position
4:complement(17594268..17597754)
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AA seq
338 aa
AA seq
DB search
MQPSVFFQNASSYVGPNGEPALSRTGFIILSILMAIFTGPAIVLNATVIIVSLMXQQLRQ
PLNFALVNMAVADLGTAMTGGVLSVVNNAQGYFSLGRTGCVMEGFAVSLFGITSLCTVAL
IAVERMFVVCKPLGYMTFQKKHAVGGIALSWLWSLTWNLPPLFGWGRYELEGVGTSCAPD
WHNRDPNNFSYILAYFAVCFAVPFAIILSSYGMLMWTLHKVSKMACLEGGAVAKGELKVA
AMVVLMVLTFLISWLPYASLAMLVVFKPDVEIHPLVGTVPVYLAKSSTVYNPIIYIYLNK
QFRRYTVPFLLCGKEPLMDDDSEGSLTVEIPAGKVSPA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcagccatctgtttttttccaaaatgcttcatcctatgtgggcccgaatggggaacct
gctctgtcacgcactggattcatcattctctccatccttatggctattttcaccggtccg
gccatcgtactcaacgctacggtgatcattgtatctctcatgncacagcagctgaggcag
ccgctcaacttcgctttggtgaacatggctgtggctgacctgggcacagccatgactgga
ggggtgctgtctgtggtcaacaacgcccaggggtacttctccctgggaagaacaggatgt
gtgatggagggctttgcagtgtccttgtttggcattacgtctctgtgcacagttgctctg
attgcagtggagaggatgtttgttgtttgtaagccattggggtatatgactttccaaaaa
aagcatgctgttggaggtattgccttatcctggctgtggtccctcacttggaacttgcct
cccctgtttggctggggcaggtatgagctggagggcgttgggacgtcctgtgcaccagac
tggcacaaccgagaccctaacaatttctcctacatcctggcttactttgcggtgtgcttt
gcagttccctttgccattatcttgtcatcctatggaatgctgatgtggacactacacaag
gtatcaaagatggcctgtctagaaggtggtgcagtagctaaaggagagctgaaggtggcg
gccatggtggttctgatggtcctgacattcctgatcagttggttgccttatgccagcctg
gccatgctggtggtcttcaagcccgatgtggagattcacccgctggtaggcacagtgcct
gtttacttggccaagagcagcactgtatacaatcctatcatctacatctacctcaacaaa
cagtttcgtagatacacagtgcccttcctactgtgtggaaaagagcccttaatggacgat
gattcagaggggtcattgactgtcgagattccagccggcaaagtgtctcctgcctga
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