Etheostoma spectabile (orangethroat darter): 116687630
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Entry
116687630 CDS
T08457
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116687630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116687630
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
L1 family
116687630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
116687630
NCBI-ProteinID:
XP_032369030
LinkDB
All DBs
Position
4:complement(35014420..35199813)
Genome browser
AA seq
1384 aa
AA seq
DB search
MLGQGGHVTLVHMSLLLLLWSKAAPIEVPQDPKILQDLKQPPTIVKQSVKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
ASNDLGVALSNKILLRVSKAPLWPKEVLEPMVVPEGTPLVLPCNPPPGLPPPFTFWMNSA
MTPIPQNERVSMGLNGDLYFSNVLTRDAHTDYSCSARFLFTHTIQQKNPFTLKVLTTDPY
NDTSYNATDPFGGRKVAESTPTFLSPSGSESSKMVLRDEHLLLECIAAGLPTPTIKWFKK
GGDLPWPKVKYENYNKTLKVINMSEEDAGEYVCMANNHLGSIRHSIFVQVKAAPYWLDKP
TNLVLAPDENGRLVCRANGNPKPNIQWLINGEPIDSSPQNPSRQVLGDTIIFRSVQMGSS
AVYQCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVIENNRTFLECPFFGSPLPDLR
WFKNGQGSGLDGGHYRVYINGTLEIKRARAEDEGTYTCVANSILGSAENQVRLEVKEPTR
IVRAPEHQSAIRGSKAHFDCKVKSDPSLPITVAWTKDDKPLHLGWRLKKDEESLTIPNVN
EGDEGTYTCTVKSEIDQDSASARLTVLDEASHHPSVSSALPPDRPDPPFDLELTEAAARS
VRLTWIPGNDHRSPITQYLVQFEEDRYEPGRWQDLSTYLGDLNSVILQLAPFVNYQFRVI
AVNSVGPSQPSRPSPRYKTSGAAPDAIPRGLRGWGSKKDNMEITWEPLLDLERNGPNLQY
NVWWRRKDLGEEWSNVTTVGSKHVVHNTETYVPYEIKIQARNEFGQGPESNMVIGYSGED
KPTDAPSDLRVSKVDSTKANIHWKPVDLSSVSGEFKEYRLYYWRESSLVPNLVVSKEKKT
KGFYSIMAQPSGILGDLVPYSKYKMFMVVANNLYEGPPSNTVEITTKEGVPDAPKFFRIN
RRSFDTLHLQWDKPLEPNGILIGYQLKYQTVNGSRVGHPKLETFSPNVTEFTLRLPDRST
RYKFYLSALTQVGAGEVFAEESPHFANEENFTDSTGLVELTDASLASAFSPTPPPLAPLP
PTTIAPTTISTSTSTTSTTASTTTTTTTTTTTEATTIGTPPQLVTIRQSDQNDLGASGRE
IWNLTVEPNSNYANVSWRHNFQAGSSEFVLELTLDSKTPDQGGNKTVKHVPRVKPPITLV
DLIAGAVYHLRVYSDDYNSVSSKSVTFKTKPAYIDQVDIATQGWFIGLMCAIALIILILL
IVCFIKRSRGGKYPGAGCVTGFTKYLVREKKDLPLDPVDQKEDGSFDYHSDEDNKPLQGS
QTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAI
YSLA
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcagggcggccatgtgaccctggttcacatgtcattattgctgctactgtgg
agcaaagcagcacccattgaagtcccacaagacccaaagatcctgcaagacctaaagcag
ccccccactatagtcaaacagtcagtgaaggactacattgtcgaccccagggataacatc
atcatcgagtgtgaggccaagggcaacccagtgccaacgttctcatggcgaaggaacggg
aagtttttcaacatcgggaaagatcccagggtgacgatgcgaaaacgctcgggaactctg
gagatcggtttccgtagcggcggacgaccagaggactatgagggagagtaccagtgtttt
gctagcaacgacctcggagttgctctgtccaacaaaattctgctccgggtctccaaggct
ccgctgtggcctaaagaggtgctggagccaatggtggtgcctgaaggcaccccactggtt
ctaccctgcaaccccccgccgggcctgcctcctcctttcactttctggatgaacagcgcc
atgactcccatccctcagaatgagagagtgtccatgggtctgaacggagacctgtacttc
tccaacgttttgaccagagacgctcacaccgactacagctgcagcgctcgcttccttttc
acacacaccatccagcaaaagaacccattcacactcaaagttctgaccacggatccgtat
aatgatacatcttacaatgccactgacccctttggtggccgtaaagtagctgagtccacc
ccgaccttcctgtcgccctcagggagtgagagctccaaaatggtgctacgagacgagcat
ctgctgctggagtgtattgctgctggacttccaacgcccaccatcaagtggtttaagaaa
ggcggggacctgccgtggccaaaagtaaagtatgagaactacaacaagaccctgaaggtt
atcaacatgtcagaggaggatgctggggagtatgtatgcatggccaacaatcatttaggc
agcatacgccactccatctttgttcaggtcaaagcggctccttattggctagacaaacct
acaaacctggtgctcgcccctgatgagaacgggcgcctggtgtgtcgggccaacggcaac
cctaaacctaacatccagtggctgatcaacggagagcctatagacagctctccccagaac
ccgagcagacaggtgctaggtgacaccatcatctttcgctcggtgcagatgggaagcagc
gctgtgtaccagtgcaacgcctccaaccagcacggctatctactggccaacgcctttgtt
agcgtcctcgacatgcctccgaggatgctgggccctaaaaaccagctgattaaagtcatc
gagaacaaccgcaccttcctggaatgtccattcttcggttcccccctgccggatttacgc
tggtttaagaacggacagggcagtgggctggatggtggccattaccgtgtttacatcaat
ggcaccctagagatcaaacgcgcccgagcagaggacgagggcacctacacctgtgtggcc
aacagcatcctgggctcggccgagaaccaggtccgcctggaggtcaaagagccgactcgt
atagtccgagccccggagcaccagtcagccatcaggggctccaaggctcactttgactgt
aaggtgaagtctgatcccagcctgcccatcactgtggcctggactaaggacgacaagccc
ctccacctgggatggagactgaagaaagatgaggagtcactaacgatccccaatgtgaat
gagggcgatgagggaacgtacacctgcactgttaaatcggagatagaccaggactcagcc
tcagcccgcctcactgtgttagatgaagcctcccaccacccctcagtgtctagtgccttg
cctccagaccgtccagaccctccctttgatctggaactgacagaagctgcagcccgcagc
gttcgcctcacctggatccccggaaacgatcacaggagcccaatcacgcaatacctggtc
cagttcgaggaggatcgctatgagccgggcaggtggcaggacctgtccacttacctcgga
gacctcaactctgtcatcctgcagctcgcccccttcgtcaactaccagttcagggtcatc
gccgtcaactcagtgggccccagtcagcccagccgcccctcaccccggtacaagaccagc
ggagcggccccagatgccattcccagaggtctacgaggatggggatccaagaaagacaat
atggagatcacctgggagcctctgcttgatctggagagaaatggcccaaacctgcaatat
aacgtgtggtggaggcggaaggatttgggagaagagtggagtaatgtgaccacggtgggg
tccaaacatgttgtccacaacacagaaacctatgtgccttatgagattaagatccaggcc
aggaatgagtttggacaaggacctgagtctaatatggtcattggatactctggagaggac
aagcccacagacgccccctccgacctgcgggtgtcaaaggttgacagcaccaaggcgaac
atacactggaagcccgtagacctgagctctgtctctggagagttcaaggagtacagattg
tactactggcgcgagtccagtctggttccgaatctggtggtaagtaaggagaagaagacc
aagggtttctacagcatcatggcccagccgtctggcatcctgggcgacctggtgccctac
tctaaatacaagatgttcatggttgtggccaacaacctctatgagggcccccccagcaac
acagtggaaatcaccaccaaggagggagtgcccgatgctccaaagttcttccgcattaac
cggagaagttttgacaccctccacctacaatgggacaaacctctggagcccaacggcatt
ctgataggataccagctgaagtatcaaacagtcaatggctccagggtgggtcatcccaag
ttggagactttctctcctaatgtgacagagttcaccctgcgcctgccggaccgatctacc
cgctacaagttctacctgtcagcgctcacccaggtgggagcaggggaggtctttgctgaa
gagtccccacactttgccaatgaagaaaactttactgactctacaggtctagtcgagctt
acagatgcctccctggcttcagctttctctcctactcctcctcctcttgctcctcttcct
cctactaccatcgctcctacaacaattagcacctcaacttctacgacttctactacagct
tctactactactactactaccaccaccactacaactgaggctaccactatcggcacacct
cctcagctggtcaccatcaggcaaagtgatcagaatgatttgggggccagtgggcgggag
atctggaatctgacggtggagcctaacagtaactacgctaacgtcagctggagacacaac
ttccaggccggcagcagcgagtttgtgctagagctcacactggacagtaagacaccagac
caaggaggcaacaagacggtgaaacatgtaccgcgggtgaaaccccccattacattggtg
gatctgatcgcaggtgccgtgtaccatctgagggtttattccgatgattacaacagcgtc
agcagcaaatctgtcacctttaagaccaaaccagcctacatagaccaggtggacatcgcc
actcaaggctggttcattggcttgatgtgtgccatcgccctcattatactaatcctcctc
atcgtctgcttcatcaagaggagtcgcgggggcaaatacccaggtgctggttgcgtgact
ggtttcacaaaatatctagtccgtgagaaaaaagatctccccttggacccagtagatcag
aaagaggacggatcctttgattaccacagcgacgaggacaacaagcccctccagggcagc
cagacgtcgctggacggcaacgtgaaggagagcgacgacagcctggtggactacggcgag
ggcggcgacggccagttcaacgaggacggctctttcatcggccagtacacggtgaagaag
gacaaggacgaaacggagggcaacgagagctctgaggccacgtctcccgtcaacgccatc
tactcgctggcgtag
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